title: Fast Algorithms for Finding Pairwise Euclidean Distance (Distance Matrix)
body: <p>I know matlab has a built in pdist function that will calculate pairwise distances. However, my matrix is so large that its 60000 by 300 and matlab runs out of memory. </p>
  
  <p>This question is a follow up on <a href="https://stackoverflow.com/questions/17756265/matlab-euclidean-pairwise-square-distance-function/17756481?noredirect=1#comment25925503_17756481">Matlab euclidean pairwise square distance function</a>.</p>
  
  <p>Is there any workaround for this computational inefficiency. I tried manually coding the pairwise distance calculations and it usually takes a full day to run (sometimes 6 to 7 hours).</p>
  
  <p>Any help is greatly appreciated!</p>