title: PHP is not loading config file
body: <p>I installed PHP 5.4.28 and PHP is not reading the config file, because I set ioncube in config file and when I put in shell "php -v" ioncube is not in response. But no directly, I can see ioncube in "php -v" only when i set file in argument "php -v -c /etc/php54.ini". In "php -r 'phpinfo();' | grep .ini" is correctly set "Configuration File (php.ini) Path => /etc/php54.ini". I dont know what is wrong.</p>
  
  <p>Summary:</p>
  
  <p><strong>php -v</strong></p>
  
  <pre><code>PHP 5.4.24 (cli) (built: Jan 28 2014 10:21:58)
  Copyright (c) 1997-2013 The PHP Group
  Zend Engine v2.4.0, Copyright (c) 1998-2013 Zend Technologies
  </code></pre>
  
  <p><strong>php -c /etc/php54.ini -v</strong></p>
  
  <pre><code>PHP 5.4.24 (cli) (built: Jan 28 2014 10:21:58)
  Copyright (c) 1997-2013 The PHP Group
  Zend Engine v2.4.0, Copyright (c) 1998-2013 Zend Technologies
      with the ionCube PHP Loader v4.5.2, Copyright (c) 2002-2014, by ionCube Ltd.
  </code></pre>
  
  <p><strong>php -r "phpinfo();" | grep .ini</strong></p>
  
  <pre><code>**Configuration File (php.ini) Path =&gt; /etc/php54.ini**
  Scan this dir for additional .ini files =&gt; (none)
  Additional .ini files parsed =&gt; (none)
  user_ini.cache_ttl =&gt; 300 =&gt; 300
  user_ini.filename =&gt; .user.ini =&gt; .user.ini
  Classes =&gt; AppendIterator, ArrayIterator, ArrayObject, BadFunctionCallException, BadMethodCallException, CachingIterator, CallbackFilterIterator, DirectoryIterator, DomainException, EmptyIterator, FilesystemIterator, FilterIterator, GlobIterator, InfiniteIterator, InvalidArgumentException, IteratorIterator, LengthException, LimitIterator, LogicException, MultipleIterator, NoRewindIterator, OutOfBoundsException, OutOfRangeException, OverflowException, ParentIterator, RangeException, RecursiveArrayIterator, RecursiveCachingIterator, RecursiveCallbackFilterIterator, RecursiveDirectoryIterator, RecursiveFilterIterator, RecursiveIteratorIterator, RecursiveRegexIterator, RecursiveTreeIterator, RegexIterator, RuntimeException, SplDoublyLinkedList, SplFileInfo, SplFileObject, SplFixedArray, SplHeap, SplMinHeap, SplMaxHeap, SplObjectStorage, SplPriorityQueue, SplQueue, SplStack, SplTempFileObject, UnderflowException, UnexpectedValueException
  </code></pre>