title: Bokeh is not generating plot and is instead returning an HTML file
body: <p>I am new to Python and was trying out the Bokeh library. I try to plot a basic line graph and instead of returning the graph I get an ouput HTML file. When I ran the HTML code it looks like the graph does generate. Does anyone have any idea why the show() method is not showing me the chart as expected. I tried this in both Jupyter Notebook as well as Atom and both return the HTML code. I am running Windows 7 as well.</p>
  
  <p>My code:</p>
  
  <pre><code>from bokeh.plotting import figure
  from bokeh.io import output_file , show
  
  x=[1,2,3,4,5]
  y=[6,7,8,9,10]
  
  output_file("test1.html")
  f=figure()
  f.line(x,y)
  show(f)
  </code></pre>
  
  <p>Returned HTML file:</p>
  
  <pre><code>&lt;!DOCTYPE html&gt;
  &lt;html lang="en"&gt;
  
    &lt;head&gt;
  
        &lt;meta charset="utf-8"&gt;
        &lt;title&gt;Bokeh Plot&lt;/title&gt; 
        &lt;link rel="stylesheet" href="https://cdn.bokeh.org/bokeh/release/bokeh-0.13.0.min.css" type="text/css" /&gt;
        &lt;script type="text/javascript" src="https://cdn.bokeh.org/bokeh/release/bokeh-0.13.0.min.js"&gt;&lt;/script&gt;
       &lt;script type="text/javascript"&gt;
              Bokeh.set_log_level("info");
          &lt;/script&gt;
    &lt;/head&gt;
    &lt;body&gt;
     &lt;div class="bk-root" id="d48bbd43-55c8-4727-befa-468754bdb0b5"&gt;&lt;/div&gt;
     &lt;script type="application/json" id="41bd10a1-5a61-4504-80f1-8c56f40e644b"&gt;
            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