After the Jokyu War, under the control of the bakufu (Japanese feudal government headed by a shogun), these shoen were successively inherited by Emperors who belonged to the Jimyoin-to line, including Emperor Gofukakusa, Emperor fushimi, Emperor Gofushimi, Emperor Hanazono, Emperor Kogen, Emperor Suko and Emperor Gokomatsu.
承久の乱後は幕府の管理下に後深草天皇→伏見天皇→後伏見天皇→花園天皇→光厳天皇→崇光天皇→後小松天皇と持明院統に伝領された。