Along with kinri goryo (private estate of Imperial Palace) and denka watariryo (a collection of estates passed on by inheritance to the Fujiwara house chieftain) (sekkanke shoryo; estate of the Fujiwara regent's line), jisha honjoryo was under the protection of the bakufu, but in the Nanbokucho civil war, hyoro ryosho (land specified for collecting provisions) was settled there for securing provisions or it was embezzled by samurai families as the object of hanzeirei (half-tax decrees).
寺社本所領は禁裏御料及び殿下渡領（摂関家所領）とともに保護の対象とされていたが、南北朝の内乱の中で兵粮の確保のために兵粮料所が設置や半済令の対象として武家の押領が相次いだ。