Later, while Tokitsura OTA and Sadao NIKAIDO were appointed as Jisha-bugyo, other bugyo were appointed respectively for temples and shrines under the aegis of Kamakura bakufu, such as Suwa-taisha Shrine, Izusan-jinja Shrine, Mishima-taisha Shrine and Atsuta-jingu Shrine.
後に太田時連や二階堂貞雄が寺社奉行に任命され、一方諏訪大社や伊豆山神社、三島大社、熱田神宮など鎌倉幕府の庇護下にあった寺社には、当該寺社担当の奉行人を任命している。