The new government system took the form of two offices and six ministries such that Jingikan was restored to be placed above Dajokan at first, and six ministries of Minbusho, Okurasho, Hyobusho, Gyobusho, Kunaisho, Gaimusho were established, and other organizations including Jishoin, Danjodai, Shugiin, and Daigakko were also established.
まず神祇官が復活して太政官よりも上位に置かれ、太政官の下には民部省・大蔵省・兵部省・刑部省・宮内省・外務省が設置されるという二官六省制が採られ、侍詔院・弾正台・集議院・大学校などの諸機関が置かれた。