As it became the Sengoku Period, there were a number of disputes involving the manor: One instance involving Nagamoto JINBO, who seized Kuragaki no Sho as the deputy military governor of Ecchu Province; on another occasion, local governors and manor residents conspired together to delay payment of land taxes made by the villages of Hibari and Shiraishi that were part of the manor.
戦国時代に入ると、越中守護代神保長誠の押領が発生したほか、代官が荘民と結託して荘内の戸破村や白石村の年貢を遅滞するなど混乱した。