Even after the Omuro-ryu sub-school, Daigo-ryu sub-school, Daikakuji-ryu sub-school and others separated, Zuishin-in Temple remained part of the Shingon Sect but became independent and divided into the Yamashina School, Ono School, Toji School and Senyuji School in 1907.
御室派、醍醐派、大覚寺派等が分立した後も随心院は「真言宗」にとどまっていたが、明治40年（1907年）には当時の「真言宗」が解消されて山階派、小野派、東寺派、泉涌寺派として独立。