Its shumuin (office for religious management) were put in Omosu Honmon-ji Temple and its organizational systems, such as the selection of the head of the sect in rotations of Hachi Honzan, were arranged, and in 1899, it changed its name to Honmon Sect.
宗務院は静岡県富士宮市の重須本門寺におかれ、八本山より輪番制で管長法主を選出するなどの組織機構が整えられ、1899年（明治32年）には本門宗と改称した。