Thereafter, Takamitsu KYOGOKU, Mochitaka KYOGOKU, and Takakazu KYOGOKU successively became the family heads, and they suppressed the frequently-occurring wars during the Muromachi period as Samurai-dokoro shoshi (Governor of the Board of Retainers).
その後、当主は京極高光、京極持高、京極高数と続き、それぞれ侍所所司として室町時代に頻発した乱の鎮圧にあたる。