Naypyidaw railway station was opened at milepost No. (233/0), between Ywataw station and Kyihtaunggan station on the Yangon-Mandalay railroad with a station area of  and a covered area of . Construction began on 8 December 2006 and Naypyidaw railway station was opened on 5 July 2009, even though the overpass, locomotive shed, concrete road leading up to the station, parking lot, passenger lounge and platform were not completed.