If you can point to a scale of atrocity PRESENTLY happening (not dragging out the Inquisition or the Crusades, etc) on the same scale as that being committed in the name of Allah by his more extreme believers, please do so. 

http://www.thereligionofpeace.com/attacks/in-the-name-of-allah.aspx

You're not too tolerant, just extremely naive and unable to make a relevant argument.

When Islam goes through its own Reform and Age of Enlightenment, then maybe you'll have a leg to stand on. But given the fundamental premise of the religion ("Submit") this is not likely to ever happen.