I have never said that "superiors must be obeyed without question" or that the Magisterium must be obeyed without question." There is no compulsion for anyone to accept what the Church teaches. 
What you don't seem to understand is that to want to belong to Christ's Holy Church means accepting what it teaches even when you don't fully understand the teaching. Each of us has the choice. If we don't believe that Christ's Church has the authority from Christ to teach in His name then we do not believe in the One, Holy, Catholic Church which the Creed requires us to.
The comparison with Eichmann is too far-fetched to be taken seriously but it is a clever yet uncharitable and unchristian ploy in order to discredit an opponent to liken him to a Nazi war criminal.
The Church is a divine institution and is not subject to the rules and conventions which govern secular institutions which are not held together by the theological virtue of Faith.