{"action":"created","issue":{"url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/4735","repository_url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology","labels_url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/4735/labels{/name}","comments_url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/4735/comments","events_url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/4735/events","html_url":"https://github.com/obophenotype/human-phenotype-ontology/issues/4735","id":437838734,"node_id":"MDU6SXNzdWU0Mzc4Mzg3MzQ=","number":4735,"title":"make local version","user":{"login":"kingmanzhang","id":22531083,"node_id":"MDQ6VXNlcjIyNTMxMDgz","avatar_url":"https://avatars0.githubusercontent.com/u/22531083?v=4","gravatar_id":"","url":"https://api.github.com/users/kingmanzhang","html_url":"https://github.com/kingmanzhang","followers_url":"https://api.github.com/users/kingmanzhang/followers","following_url":"https://api.github.com/users/kingmanzhang/following{/other_user}","gists_url":"https://api.github.com/users/kingmanzhang/gists{/gist_id}","starred_url":"https://api.github.com/users/kingmanzhang/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kingmanzhang/subscriptions","organizations_url":"https://api.github.com/users/kingmanzhang/orgs","repos_url":"https://api.github.com/users/kingmanzhang/repos","events_url":"https://api.github.com/users/kingmanzhang/events{/privacy}","received_events_url":"https://api.github.com/users/kingmanzhang/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"matentzn","id":7070631,"node_id":"MDQ6VXNlcjcwNzA2MzE=","avatar_url":"https://avatars1.githubusercontent.com/u/7070631?v=4","gravatar_id":"","url":"https://api.github.com/users/matentzn","html_url":"https://github.com/matentzn","followers_url":"https://api.github.com/users/matentzn/followers","following_url":"https://api.github.com/users/matentzn/following{/other_user}","gists_url":"https://api.github.com/users/matentzn/gists{/gist_id}","starred_url":"https://api.github.com/users/matentzn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/matentzn/subscriptions","organizations_url":"https://api.github.com/users/matentzn/orgs","repos_url":"https://api.github.com/users/matentzn/repos","events_url":"https://api.github.com/users/matentzn/events{/privacy}","received_events_url":"https://api.github.com/users/matentzn/received_events","type":"User","site_admin":false},"assignees":[{"login":"matentzn","id":7070631,"node_id":"MDQ6VXNlcjcwNzA2MzE=","avatar_url":"https://avatars1.githubusercontent.com/u/7070631?v=4","gravatar_id":"","url":"https://api.github.com/users/matentzn","html_url":"https://github.com/matentzn","followers_url":"https://api.github.com/users/matentzn/followers","following_url":"https://api.github.com/users/matentzn/following{/other_user}","gists_url":"https://api.github.com/users/matentzn/gists{/gist_id}","starred_url":"https://api.github.com/users/matentzn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/matentzn/subscriptions","organizations_url":"https://api.github.com/users/matentzn/orgs","repos_url":"https://api.github.com/users/matentzn/repos","events_url":"https://api.github.com/users/matentzn/events{/privacy}","received_events_url":"https://api.github.com/users/matentzn/received_events","type":"User","site_admin":false}],"milestone":null,"comments":6,"created_at":"2019-04-26T20:43:49Z","updated_at":"2019-05-03T15:03:19Z","closed_at":null,"author_association":"COLLABORATOR","body":"@matentzn Hi Nico, how to run the make file now? It seems I have error when running make under src/ontology\r\n```\r\nhp.Makefile:70: warning: overriding commands for target `test'\r\nMakefile:46: warning: ignoring old commands for target `test'\r\nhp.Makefile:74: warning: overriding commands for target `hp.owl'\r\nMakefile:169: warning: ignoring old commands for target `hp.owl'\r\njava.lang.IllegalArgumentException: inputOntology must be specified\r\n\tat org.obolibrary.robot.CommandLineHelper.getInputOntology(CommandLineHelper.java:296)\r\n\tat org.obolibrary.robot.CommandLineHelper.updateInputOntology(CommandLineHelper.java:351)\r\n\tat org.obolibrary.robot.CommandLineHelper.updateInputOntology(CommandLineHelper.java:316)\r\n\tat org.obolibrary.robot.ConvertCommand.execute(ConvertCommand.java:128)\r\n\tat org.obolibrary.robot.CommandManager.executeCommand(CommandManager.java:242)\r\n\tat org.obolibrary.robot.CommandManager.execute(CommandManager.java:177)\r\n\tat org.obolibrary.robot.CommandManager.main(CommandManager.java:135)\r\n\tat org.obolibrary.robot.CommandLineInterface.main(CommandLineInterface.java:56)\r\njava.lang.IllegalArgumentException: A valid input ontology must be specified\r\n\tat org.obolibrary.robot.CommandLineHelper.updateInputOntology(CommandLineHelper.java:355)\r\n\tat org.obolibrary.robot.CommandLineHelper.updateInputOntology(CommandLineHelper.java:316)\r\n\tat org.obolibrary.robot.ConvertCommand.execute(ConvertCommand.java:128)\r\n\tat org.obolibrary.robot.CommandManager.executeCommand(CommandManager.java:242)\r\n\tat org.obolibrary.robot.CommandManager.execute(CommandManager.java:177)\r\n\tat org.obolibrary.robot.CommandManager.main(CommandManager.java:135)\r\n\tat org.obolibrary.robot.CommandLineInterface.main(CommandLineInterface.java:56)\r\n```\r\nAm I missing anything?"},"comment":{"url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/comments/489126771","html_url":"https://github.com/obophenotype/human-phenotype-ontology/issues/4735#issuecomment-489126771","issue_url":"https://api.github.com/repos/obophenotype/human-phenotype-ontology/issues/4735","id":489126771,"node_id":"MDEyOklzc3VlQ29tbWVudDQ4OTEyNjc3MQ==","user":{"login":"matentzn","id":7070631,"node_id":"MDQ6VXNlcjcwNzA2MzE=","avatar_url":"https://avatars1.githubusercontent.com/u/7070631?v=4","gravatar_id":"","url":"https://api.github.com/users/matentzn","html_url":"https://github.com/matentzn","followers_url":"https://api.github.com/users/matentzn/followers","following_url":"https://api.github.com/users/matentzn/following{/other_user}","gists_url":"https://api.github.com/users/matentzn/gists{/gist_id}","starred_url":"https://api.github.com/users/matentzn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/matentzn/subscriptions","organizations_url":"https://api.github.com/users/matentzn/orgs","repos_url":"https://api.github.com/users/matentzn/repos","events_url":"https://api.github.com/users/matentzn/events{/privacy}","received_events_url":"https://api.github.com/users/matentzn/received_events","type":"User","site_admin":false},"created_at":"2019-05-03T15:03:19Z","updated_at":"2019-05-03T15:03:19Z","author_association":"CONTRIBUTOR","body":"This error is most likely caused by a lack of memory.\r\n\r\nDocker -> Preferences -> Advanced -> [Increase memory to 6GB or 8GB]\r\n\r\nDoes this work?"}}
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