{"action":"created","issue":{"url":"https://api.github.com/repos/tseemann/prokka/issues/419","repository_url":"https://api.github.com/repos/tseemann/prokka","labels_url":"https://api.github.com/repos/tseemann/prokka/issues/419/labels{/name}","comments_url":"https://api.github.com/repos/tseemann/prokka/issues/419/comments","events_url":"https://api.github.com/repos/tseemann/prokka/issues/419/events","html_url":"https://github.com/tseemann/prokka/issues/419","id":501773557,"node_id":"MDU6SXNzdWU1MDE3NzM1NTc=","number":419,"title":"Ubuntu issues loading fasta file \"not a readable non-empty FASTA\"","user":{"login":"beherrm","id":56003310,"node_id":"MDQ6VXNlcjU2MDAzMzEw","avatar_url":"https://avatars0.githubusercontent.com/u/56003310?v=4","gravatar_id":"","url":"https://api.github.com/users/beherrm","html_url":"https://github.com/beherrm","followers_url":"https://api.github.com/users/beherrm/followers","following_url":"https://api.github.com/users/beherrm/following{/other_user}","gists_url":"https://api.github.com/users/beherrm/gists{/gist_id}","starred_url":"https://api.github.com/users/beherrm/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/beherrm/subscriptions","organizations_url":"https://api.github.com/users/beherrm/orgs","repos_url":"https://api.github.com/users/beherrm/repos","events_url":"https://api.github.com/users/beherrm/events{/privacy}","received_events_url":"https://api.github.com/users/beherrm/received_events","type":"User","site_admin":false},"labels":[{"id":88367183,"node_id":"MDU6TGFiZWw4ODM2NzE4Mw==","url":"https://api.github.com/repos/tseemann/prokka/labels/question","name":"question","color":"cc317c","default":true}],"state":"closed","locked":false,"assignee":{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false},"assignees":[{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false}],"milestone":null,"comments":10,"created_at":"2019-10-02T23:20:35Z","updated_at":"2019-10-07T04:22:32Z","closed_at":"2019-10-06T08:21:47Z","author_association":"NONE","body":"Hi, new user here,\r\n\r\nI just loaded prokka on Ubuntu with linuxbrew. \r\nWhen I call on my file..\r\n$ prokka 784contig.fasta\r\n\r\nI get the error message: \r\n[19:08:59] This is prokka 1.14.0\r\n[19:08:59] Written by Torsten Seemann <torsten.seemann@gmail.com>\r\n[19:08:59] Homepage is https://github.com/tseemann/prokka\r\n[19:08:59] Local time is Wed Oct  2 19:08:59 2019\r\n[19:08:59] You are beherrm\r\n[19:08:59] Operating system is linux\r\n[19:08:59] You have BioPerl 1.007002\r\n[19:08:59] System has 8 cores.\r\n[19:08:59] Will use maximum of 8 cores.\r\n[19:08:59] Annotating as >>> Bacteria <<<\r\n[19:08:59] '784.fasta' is not a readable non-empty FASTA file\r\n\r\nMy filesize is not zero and I believe is a FASTA file. Could the issue be permissions or something in the script by using the WSL?\r\n\r\nThank you for your help"},"comment":{"url":"https://api.github.com/repos/tseemann/prokka/issues/comments/538834264","html_url":"https://github.com/tseemann/prokka/issues/419#issuecomment-538834264","issue_url":"https://api.github.com/repos/tseemann/prokka/issues/419","id":538834264,"node_id":"MDEyOklzc3VlQ29tbWVudDUzODgzNDI2NA==","user":{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false},"created_at":"2019-10-07T04:22:32Z","updated_at":"2019-10-07T04:22:32Z","author_association":"OWNER","body":"@beherrm no i don't have any suggestions. i don't have experience with WSL on Win10. Earlier i asked you to run some command for me `head ...` but you didn't."}}
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