{"action":"created","comment":{"url":"https://api.github.com/repos/DataBiosphere/azul/pulls/comments/341438968","pull_request_review_id":310275404,"id":341438968,"node_id":"MDI0OlB1bGxSZXF1ZXN0UmV2aWV3Q29tbWVudDM0MTQzODk2OA==","diff_hunk":"@@ -102,6 +102,9 @@ class BundleAndSize(NamedTuple):\n                                      size=258)\n         self.assertTrue(small_bundle.size < IndexWriter.bulk_threshold < large_bundle.size)\n \n+        from azul.plugin import Plugin","path":"test/indexer/test_hca_indexer.py","position":4,"original_position":4,"commit_id":"cfb9c0d57377fad81369806bf98729e8e4a50987","original_commit_id":"cfb9c0d57377fad81369806bf98729e8e4a50987","user":{"login":"hannes-ucsc","id":5143256,"node_id":"MDQ6VXNlcjUxNDMyNTY=","avatar_url":"https://avatars2.githubusercontent.com/u/5143256?v=4","gravatar_id":"","url":"https://api.github.com/users/hannes-ucsc","html_url":"https://github.com/hannes-ucsc","followers_url":"https://api.github.com/users/hannes-ucsc/followers","following_url":"https://api.github.com/users/hannes-ucsc/following{/other_user}","gists_url":"https://api.github.com/users/hannes-ucsc/gists{/gist_id}","starred_url":"https://api.github.com/users/hannes-ucsc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/hannes-ucsc/subscriptions","organizations_url":"https://api.github.com/users/hannes-ucsc/orgs","repos_url":"https://api.github.com/users/hannes-ucsc/repos","events_url":"https://api.github.com/users/hannes-ucsc/events{/privacy}","received_events_url":"https://api.github.com/users/hannes-ucsc/received_events","type":"User","site_admin":false},"body":"If this is to avoid a circular import, I would like to talk about avoiding it. Otherwise, it should be top-level import.","created_at":"2019-11-01T03:15:30Z","updated_at":"2019-11-01T03:21:48Z","html_url":"https://github.com/DataBiosphere/azul/pull/1382#discussion_r341438968","pull_request_url":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382","author_association":"COLLABORATOR","_links":{"self":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/comments/341438968"},"html":{"href":"https://github.com/DataBiosphere/azul/pull/1382#discussion_r341438968"},"pull_request":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382"}}},"pull_request":{"url":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382","id":328394070,"node_id":"MDExOlB1bGxSZXF1ZXN0MzI4Mzk0MDcw","html_url":"https://github.com/DataBiosphere/azul/pull/1382","diff_url":"https://github.com/DataBiosphere/azul/pull/1382.diff","patch_url":"https://github.com/DataBiosphere/azul/pull/1382.patch","issue_url":"https://api.github.com/repos/DataBiosphere/azul/issues/1382","number":1382,"state":"open","locked":false,"title":"Indexer ignores mismatch between _foo and _foo_types (#1344)","user":{"login":"danielsotirhos","id":46407464,"node_id":"MDQ6VXNlcjQ2NDA3NDY0","avatar_url":"https://avatars1.githubusercontent.com/u/46407464?v=4","gravatar_id":"","url":"https://api.github.com/users/danielsotirhos","html_url":"https://github.com/danielsotirhos","followers_url":"https://api.github.com/users/danielsotirhos/followers","following_url":"https://api.github.com/users/danielsotirhos/following{/other_user}","gists_url":"https://api.github.com/users/danielsotirhos/gists{/gist_id}","starred_url":"https://api.github.com/users/danielsotirhos/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/danielsotirhos/subscriptions","organizations_url":"https://api.github.com/users/danielsotirhos/orgs","repos_url":"https://api.github.com/users/danielsotirhos/repos","events_url":"https://api.github.com/users/danielsotirhos/events{/privacy}","received_events_url":"https://api.github.com/users/danielsotirhos/received_events","type":"User","site_admin":false},"body":"","created_at":"2019-10-15T17:58:31Z","updated_at":"2019-11-01T03:21:48Z","closed_at":null,"merged_at":null,"merge_commit_sha":"95f3f58693fb411e08da0bfbbc574dfe7fc1089e","assignee":{"login":"hannes-ucsc","id":5143256,"node_id":"MDQ6VXNlcjUxNDMyNTY=","avatar_url":"https://avatars2.githubusercontent.com/u/5143256?v=4","gravatar_id":"","url":"https://api.github.com/users/hannes-ucsc","html_url":"https://github.com/hannes-ucsc","followers_url":"https://api.github.com/users/hannes-ucsc/followers","following_url":"https://api.github.com/users/hannes-ucsc/following{/other_user}","gists_url":"https://api.github.com/users/hannes-ucsc/gists{/gist_id}","starred_url":"https://api.github.com/users/hannes-ucsc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/hannes-ucsc/subscriptions","organizations_url":"https://api.github.com/users/hannes-ucsc/orgs","repos_url":"https://api.github.com/users/hannes-ucsc/repos","events_url":"https://api.github.com/users/hannes-ucsc/events{/privacy}","received_events_url":"https://api.github.com/users/hannes-ucsc/received_events","type":"User","site_admin":false},"assignees":[{"login":"hannes-ucsc","id":5143256,"node_id":"MDQ6VXNlcjUxNDMyNTY=","avatar_url":"https://avatars2.githubusercontent.com/u/5143256?v=4","gravatar_id":"","url":"https://api.github.com/users/hannes-ucsc","html_url":"https://github.com/hannes-ucsc","followers_url":"https://api.github.com/users/hannes-ucsc/followers","following_url":"https://api.github.com/users/hannes-ucsc/following{/other_user}","gists_url":"https://api.github.com/users/hannes-ucsc/gists{/gist_id}","starred_url":"https://api.github.com/users/hannes-ucsc/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/hannes-ucsc/subscriptions","organizations_url":"https://api.github.com/users/hannes-ucsc/orgs","repos_url":"https://api.github.com/users/hannes-ucsc/repos","events_url":"https://api.github.com/users/hannes-ucsc/events{/privacy}","received_events_url":"https://api.github.com/users/hannes-ucsc/received_events","type":"User","site_admin":false}],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382/commits","review_comments_url":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382/comments","review_comment_url":"https://api.github.com/repos/DataBiosphere/azul/pulls/comments{/number}","comments_url":"https://api.github.com/repos/DataBiosphere/azul/issues/1382/comments","statuses_url":"https://api.github.com/repos/DataBiosphere/azul/statuses/cfb9c0d57377fad81369806bf98729e8e4a50987","head":{"label":"DataBiosphere:issues/danielsotirhos/1344-make-field-types-required","ref":"issues/danielsotirhos/1344-make-field-types-required","sha":"cfb9c0d57377fad81369806bf98729e8e4a50987","user":{"login":"DataBiosphere","id":32805087,"node_id":"MDEyOk9yZ2FuaXphdGlvbjMyODA1MDg3","avatar_url":"https://avatars0.githubusercontent.com/u/32805087?v=4","gravatar_id":"","url":"https://api.github.com/users/DataBiosphere","html_url":"https://github.com/DataBiosphere","followers_url":"https://api.github.com/users/DataBiosphere/followers","following_url":"https://api.github.com/users/DataBiosphere/following{/other_user}","gists_url":"https://api.github.com/users/DataBiosphere/gists{/gist_id}","starred_url":"https://api.github.com/users/DataBiosphere/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/DataBiosphere/subscriptions","organizations_url":"https://api.github.com/users/DataBiosphere/orgs","repos_url":"https://api.github.com/users/DataBiosphere/repos","events_url":"https://api.github.com/users/DataBiosphere/events{/privacy}","received_events_url":"https://api.github.com/users/DataBiosphere/received_events","type":"Organization","site_admin":false},"repo":{"id":139095537,"node_id":"MDEwOlJlcG9zaXRvcnkxMzkwOTU1Mzc=","name":"azul","full_name":"DataBiosphere/azul","private":false,"owner":{"login":"DataBiosphere","id":32805087,"node_id":"MDEyOk9yZ2FuaXphdGlvbjMyODA1MDg3","avatar_url":"https://avatars0.githubusercontent.com/u/32805087?v=4","gravatar_id":"","url":"https://api.github.com/users/DataBiosphere","html_url":"https://github.com/DataBiosphere","followers_url":"https://api.github.com/users/DataBiosphere/followers","following_url":"https://api.github.com/users/DataBiosphere/following{/other_user}","gists_url":"https://api.github.com/users/DataBiosphere/gists{/gist_id}","starred_url":"https://api.github.com/users/DataBiosphere/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/DataBiosphere/subscriptions","organizations_url":"https://api.github.com/users/DataBiosphere/orgs","repos_url":"https://api.github.com/users/DataBiosphere/repos","events_url":"https://api.github.com/users/DataBiosphere/events{/privacy}","received_events_url":"https://api.github.com/users/DataBiosphere/received_events","type":"Organization","site_admin":false},"html_url":"https://github.com/DataBiosphere/azul","description":"Metadata indexer and query service used for HCA and CGP","fork":false,"url":"https://api.github.com/repos/DataBiosphere/azul","forks_url":"https://api.github.com/repos/DataBiosphere/azul/forks","keys_url":"https://api.github.com/repos/DataBiosphere/azul/keys{/key_id}","collaborators_url":"https://api.github.com/repos/DataBiosphere/azul/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/DataBiosphere/azul/teams","hooks_url":"https://api.github.com/repos/DataBiosphere/azul/hooks","issue_events_url":"https://api.github.com/repos/DataBiosphere/azul/issues/events{/number}","events_url":"https://api.github.com/repos/DataBiosphere/azul/events","assignees_url":"https://api.github.com/repos/DataBiosphere/azul/assignees{/user}","branches_url":"https://api.github.com/repos/DataBiosphere/azul/branches{/branch}","tags_url":"https://api.github.com/repos/DataBiosphere/azul/tags","blobs_url":"https://api.github.com/repos/DataBiosphere/azul/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/DataBiosphere/azul/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/DataBiosphere/azul/git/refs{/sha}","trees_url":"https://api.github.com/repos/DataBiosphere/azul/git/trees{/sha}","statuses_url":"https://api.github.com/repos/DataBiosphere/azul/statuses/{sha}","languages_url":"https://api.github.com/repos/DataBiosphere/azul/languages","stargazers_url":"https://api.github.com/repos/DataBiosphere/azul/stargazers","contributors_url":"https://api.github.com/repos/DataBiosphere/azul/contributors","subscribers_url":"https://api.github.com/repos/DataBiosphere/azul/subscribers","subscription_url":"https://api.github.com/repos/DataBiosphere/azul/subscription","commits_url":"https://api.github.com/repos/DataBiosphere/azul/commits{/sha}","git_commits_url":"https://api.github.com/repos/DataBiosphere/azul/git/commits{/sha}","comments_url":"https://api.github.com/repos/DataBiosphere/azul/comments{/number}","issue_comment_url":"https://api.github.com/repos/DataBiosphere/azul/issues/comments{/number}","contents_url":"https://api.github.com/repos/DataBiosphere/azul/contents/{+path}","compare_url":"https://api.github.com/repos/DataBiosphere/azul/compare/{base}...{head}","merges_url":"https://api.github.com/repos/DataBiosphere/azul/merges","archive_url":"https://api.github.com/repos/DataBiosphere/azul/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/DataBiosphere/azul/downloads","issues_url":"https://api.github.com/repos/DataBiosphere/azul/issues{/number}","pulls_url":"https://api.github.com/repos/DataBiosphere/azul/pulls{/number}","milestones_url":"https://api.github.com/repos/DataBiosphere/azul/milestones{/number}","notifications_url":"https://api.github.com/repos/DataBiosphere/azul/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/DataBiosphere/azul/labels{/name}","releases_url":"https://api.github.com/repos/DataBiosphere/azul/releases{/id}","deployments_url":"https://api.github.com/repos/DataBiosphere/azul/deployments","created_at":"2018-06-29T03:18:14Z","updated_at":"2019-11-01T00:59:35Z","pushed_at":"2019-11-01T01:24:05Z","git_url":"git://github.com/DataBiosphere/azul.git","ssh_url":"git@github.com:DataBiosphere/azul.git","clone_url":"https://github.com/DataBiosphere/azul.git","svn_url":"https://github.com/DataBiosphere/azul","homepage":"","size":15250,"stargazers_count":7,"watchers_count":7,"language":"Python","has_issues":true,"has_projects":false,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":2,"mirror_url":null,"archived":false,"disabled":false,"open_issues_count":184,"license":{"key":"apache-2.0","name":"Apache License 2.0","spdx_id":"Apache-2.0","url":"https://api.github.com/licenses/apache-2.0","node_id":"MDc6TGljZW5zZTI="},"forks":2,"open_issues":184,"watchers":7,"default_branch":"develop"}},"base":{"label":"DataBiosphere:develop","ref":"develop","sha":"5c310943ad9d250af2c4314296341bb5d594ed31","user":{"login":"DataBiosphere","id":32805087,"node_id":"MDEyOk9yZ2FuaXphdGlvbjMyODA1MDg3","avatar_url":"https://avatars0.githubusercontent.com/u/32805087?v=4","gravatar_id":"","url":"https://api.github.com/users/DataBiosphere","html_url":"https://github.com/DataBiosphere","followers_url":"https://api.github.com/users/DataBiosphere/followers","following_url":"https://api.github.com/users/DataBiosphere/following{/other_user}","gists_url":"https://api.github.com/users/DataBiosphere/gists{/gist_id}","starred_url":"https://api.github.com/users/DataBiosphere/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/DataBiosphere/subscriptions","organizations_url":"https://api.github.com/users/DataBiosphere/orgs","repos_url":"https://api.github.com/users/DataBiosphere/repos","events_url":"https://api.github.com/users/DataBiosphere/events{/privacy}","received_events_url":"https://api.github.com/users/DataBiosphere/received_events","type":"Organization","site_admin":false},"repo":{"id":139095537,"node_id":"MDEwOlJlcG9zaXRvcnkxMzkwOTU1Mzc=","name":"azul","full_name":"DataBiosphere/azul","private":false,"owner":{"login":"DataBiosphere","id":32805087,"node_id":"MDEyOk9yZ2FuaXphdGlvbjMyODA1MDg3","avatar_url":"https://avatars0.githubusercontent.com/u/32805087?v=4","gravatar_id":"","url":"https://api.github.com/users/DataBiosphere","html_url":"https://github.com/DataBiosphere","followers_url":"https://api.github.com/users/DataBiosphere/followers","following_url":"https://api.github.com/users/DataBiosphere/following{/other_user}","gists_url":"https://api.github.com/users/DataBiosphere/gists{/gist_id}","starred_url":"https://api.github.com/users/DataBiosphere/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/DataBiosphere/subscriptions","organizations_url":"https://api.github.com/users/DataBiosphere/orgs","repos_url":"https://api.github.com/users/DataBiosphere/repos","events_url":"https://api.github.com/users/DataBiosphere/events{/privacy}","received_events_url":"https://api.github.com/users/DataBiosphere/received_events","type":"Organization","site_admin":false},"html_url":"https://github.com/DataBiosphere/azul","description":"Metadata indexer and query service used for HCA and CGP","fork":false,"url":"https://api.github.com/repos/DataBiosphere/azul","forks_url":"https://api.github.com/repos/DataBiosphere/azul/forks","keys_url":"https://api.github.com/repos/DataBiosphere/azul/keys{/key_id}","collaborators_url":"https://api.github.com/repos/DataBiosphere/azul/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/DataBiosphere/azul/teams","hooks_url":"https://api.github.com/repos/DataBiosphere/azul/hooks","issue_events_url":"https://api.github.com/repos/DataBiosphere/azul/issues/events{/number}","events_url":"https://api.github.com/repos/DataBiosphere/azul/events","assignees_url":"https://api.github.com/repos/DataBiosphere/azul/assignees{/user}","branches_url":"https://api.github.com/repos/DataBiosphere/azul/branches{/branch}","tags_url":"https://api.github.com/repos/DataBiosphere/azul/tags","blobs_url":"https://api.github.com/repos/DataBiosphere/azul/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/DataBiosphere/azul/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/DataBiosphere/azul/git/refs{/sha}","trees_url":"https://api.github.com/repos/DataBiosphere/azul/git/trees{/sha}","statuses_url":"https://api.github.com/repos/DataBiosphere/azul/statuses/{sha}","languages_url":"https://api.github.com/repos/DataBiosphere/azul/languages","stargazers_url":"https://api.github.com/repos/DataBiosphere/azul/stargazers","contributors_url":"https://api.github.com/repos/DataBiosphere/azul/contributors","subscribers_url":"https://api.github.com/repos/DataBiosphere/azul/subscribers","subscription_url":"https://api.github.com/repos/DataBiosphere/azul/subscription","commits_url":"https://api.github.com/repos/DataBiosphere/azul/commits{/sha}","git_commits_url":"https://api.github.com/repos/DataBiosphere/azul/git/commits{/sha}","comments_url":"https://api.github.com/repos/DataBiosphere/azul/comments{/number}","issue_comment_url":"https://api.github.com/repos/DataBiosphere/azul/issues/comments{/number}","contents_url":"https://api.github.com/repos/DataBiosphere/azul/contents/{+path}","compare_url":"https://api.github.com/repos/DataBiosphere/azul/compare/{base}...{head}","merges_url":"https://api.github.com/repos/DataBiosphere/azul/merges","archive_url":"https://api.github.com/repos/DataBiosphere/azul/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/DataBiosphere/azul/downloads","issues_url":"https://api.github.com/repos/DataBiosphere/azul/issues{/number}","pulls_url":"https://api.github.com/repos/DataBiosphere/azul/pulls{/number}","milestones_url":"https://api.github.com/repos/DataBiosphere/azul/milestones{/number}","notifications_url":"https://api.github.com/repos/DataBiosphere/azul/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/DataBiosphere/azul/labels{/name}","releases_url":"https://api.github.com/repos/DataBiosphere/azul/releases{/id}","deployments_url":"https://api.github.com/repos/DataBiosphere/azul/deployments","created_at":"2018-06-29T03:18:14Z","updated_at":"2019-11-01T00:59:35Z","pushed_at":"2019-11-01T01:24:05Z","git_url":"git://github.com/DataBiosphere/azul.git","ssh_url":"git@github.com:DataBiosphere/azul.git","clone_url":"https://github.com/DataBiosphere/azul.git","svn_url":"https://github.com/DataBiosphere/azul","homepage":"","size":15250,"stargazers_count":7,"watchers_count":7,"language":"Python","has_issues":true,"has_projects":false,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":2,"mirror_url":null,"archived":false,"disabled":false,"open_issues_count":184,"license":{"key":"apache-2.0","name":"Apache License 2.0","spdx_id":"Apache-2.0","url":"https://api.github.com/licenses/apache-2.0","node_id":"MDc6TGljZW5zZTI="},"forks":2,"open_issues":184,"watchers":7,"default_branch":"develop"}},"_links":{"self":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382"},"html":{"href":"https://github.com/DataBiosphere/azul/pull/1382"},"issue":{"href":"https://api.github.com/repos/DataBiosphere/azul/issues/1382"},"comments":{"href":"https://api.github.com/repos/DataBiosphere/azul/issues/1382/comments"},"review_comments":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382/comments"},"review_comment":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/DataBiosphere/azul/pulls/1382/commits"},"statuses":{"href":"https://api.github.com/repos/DataBiosphere/azul/statuses/cfb9c0d57377fad81369806bf98729e8e4a50987"}},"author_association":"CONTRIBUTOR"}}
{"actor":{"display_login":"hannes-ucsc"}}