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- workflow fixes","description":"This milestone is bounded at two weeks for the resolution of critical workflow items. ","creator":{"login":"wasade","id":474290,"node_id":"MDQ6VXNlcjQ3NDI5MA==","avatar_url":"https://avatars3.githubusercontent.com/u/474290?v=4","gravatar_id":"","url":"https://api.github.com/users/wasade","html_url":"https://github.com/wasade","followers_url":"https://api.github.com/users/wasade/followers","following_url":"https://api.github.com/users/wasade/following{/other_user}","gists_url":"https://api.github.com/users/wasade/gists{/gist_id}","starred_url":"https://api.github.com/users/wasade/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wasade/subscriptions","organizations_url":"https://api.github.com/users/wasade/orgs","repos_url":"https://api.github.com/users/wasade/repos","events_url":"https://api.github.com/users/wasade/events{/privacy}","received_events_url":"https://api.github.com/users/wasade/received_events","type":"User","site_admin":false},"open_issues":1,"closed_issues":15,"state":"open","created_at":"2019-04-25T14:41:49Z","updated_at":"2019-05-10T07:14:35Z","due_on":"2019-05-09T07:00:00Z","closed_at":null},"comments":16,"created_at":"2018-08-16T23:10:49Z","updated_at":"2019-05-10T17:57:21Z","closed_at":null,"author_association":"COLLABORATOR","body":"While Labman currently includes code to generate a Preparation Sheet (aka prep info file) for shotgun runs, those files do not follow the specifications required by Gail, who currently prepares the manually with input from the sample sheet.\r\n\r\nThe scope of this issue includes working with Gail to get a known-good shotgun prep info file and descriptions of what goes in each column, then modifying the labman code to produce a file with this content/format and reinstating the ability to download this file from the labman interface (i.e., reversing the fix for #326 Disable Preparation Sheet download for shotgun sequencing runs ).  Since numerous fields are shared between the amplicon prep info file and the shotgun prep info file, code duplication should be minimized."},"comment":{"url":"https://api.github.com/repos/jdereus/labman/issues/comments/491377995","html_url":"https://github.com/jdereus/labman/issues/327#issuecomment-491377995","issue_url":"https://api.github.com/repos/jdereus/labman/issues/327","id":491377995,"node_id":"MDEyOklzc3VlQ29tbWVudDQ5MTM3Nzk5NQ==","user":{"login":"wasade","id":474290,"node_id":"MDQ6VXNlcjQ3NDI5MA==","avatar_url":"https://avatars3.githubusercontent.com/u/474290?v=4","gravatar_id":"","url":"https://api.github.com/users/wasade","html_url":"https://github.com/wasade","followers_url":"https://api.github.com/users/wasade/followers","following_url":"https://api.github.com/users/wasade/following{/other_user}","gists_url":"https://api.github.com/users/wasade/gists{/gist_id}","starred_url":"https://api.github.com/users/wasade/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wasade/subscriptions","organizations_url":"https://api.github.com/users/wasade/orgs","repos_url":"https://api.github.com/users/wasade/repos","events_url":"https://api.github.com/users/wasade/events{/privacy}","received_events_url":"https://api.github.com/users/wasade/received_events","type":"User","site_admin":false},"created_at":"2019-05-10T17:57:21Z","updated_at":"2019-05-10T17:57:21Z","author_association":"COLLABORATOR","body":"@charles-cowart, can this be closed now that #502 is merged?"}}
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