{"action":"created","comment":{"url":"https://api.github.com/repos/radical-cybertools/radical.utils/pulls/comments/348151950","pull_request_review_id":319332824,"id":348151950,"node_id":"MDI0OlB1bGxSZXF1ZXN0UmV2aWV3Q29tbWVudDM0ODE1MTk1MA==","diff_hunk":"@@ -265,59 +190,57 @@ def _bridge_work(self):\n         try:\n \n             buf = list()\n-\n-            i = -1\n             while True:\n \n-                i += 1\n-\n-                # we avoid busy pulling during inactivity\n+                # check for incoming messages, and buffer them\n+                ev_put = dict(no_intr(self._poll_put.poll, timeout=0))","path":"src/radical/utils/zmq/queue.py","position":250,"original_position":250,"commit_id":"a983137f81499b099f59cf3a2a502970c1e852ba","original_commit_id":"94389cf87f88cc17e1cddfd26bc2be3e7b2ff957","user":{"login":"andre-merzky","id":1319674,"node_id":"MDQ6VXNlcjEzMTk2NzQ=","avatar_url":"https://avatars2.githubusercontent.com/u/1319674?v=4","gravatar_id":"","url":"https://api.github.com/users/andre-merzky","html_url":"https://github.com/andre-merzky","followers_url":"https://api.github.com/users/andre-merzky/followers","following_url":"https://api.github.com/users/andre-merzky/following{/other_user}","gists_url":"https://api.github.com/users/andre-merzky/gists{/gist_id}","starred_url":"https://api.github.com/users/andre-merzky/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/andre-merzky/subscriptions","organizations_url":"https://api.github.com/users/andre-merzky/orgs","repos_url":"https://api.github.com/users/andre-merzky/repos","events_url":"https://api.github.com/users/andre-merzky/events{/privacy}","received_events_url":"https://api.github.com/users/andre-merzky/received_events","type":"User","site_admin":false},"body":"For the timeout question, there is also a comment around line 240.","created_at":"2019-11-19T20:33:00Z","updated_at":"2019-11-19T20:33:00Z","html_url":"https://github.com/radical-cybertools/radical.utils/pull/191#discussion_r348151950","pull_request_url":"https://api.github.com/repos/radical-cybertools/radical.utils/pulls/191","author_association":"MEMBER","_links":{"self":{"href":"https://api.github.com/repos/radical-cybertools/radical.utils/pulls/comments/348151950"},"html":{"href":"https://github.com/radical-cybertools/radical.utils/pull/191#discussion_r348151950"},"pull_request":{"href":"https://api.github.com/repos/radical-cybertools/radical.utils/pulls/191"}},"in_reply_to_id":348065251},"pull_request":{"url":"https://api.github.com/repos/radical-cybertools/radical.utils/pulls/191","id":337302360,"node_id":"MDExOlB1bGxSZXF1ZXN0MzM3MzAyMzYw","html_url":"https://github.com/radical-cybertools/radical.utils/pull/191","diff_url":"https://github.com/radical-cybertools/radical.utils/pull/191.diff","patch_url":"https://github.com/radical-cybertools/radical.utils/pull/191.patch","issue_url":"https://api.github.com/repos/radical-cybertools/radical.utils/issues/191","number":191,"state":"open","locked":false,"title":"Feature/proc mgmt","user":{"login":"andre-merzky","id":1319674,"node_id":"MDQ6VXNlcjEzMTk2NzQ=","avatar_url":"https://avatars2.githubusercontent.com/u/1319674?v=4","gravatar_id":"","url":"https://api.github.com/users/andre-merzky","html_url":"https://github.com/andre-merzky","followers_url":"https://api.github.com/users/andre-merzky/followers","following_url":"https://api.github.com/users/andre-merzky/following{/other_user}","gists_url":"https://api.github.com/users/andre-merzky/gists{/gist_id}","starred_url":"https://api.github.com/users/andre-merzky/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/andre-merzky/subscriptions","organizations_url":"https://api.github.com/users/andre-merzky/orgs","repos_url":"https://api.github.com/users/andre-merzky/repos","events_url":"https://api.github.com/users/andre-merzky/events{/privacy}","received_events_url":"https://api.github.com/users/andre-merzky/received_events","type":"User","site_admin":false},"body":"This PR supports the switch from watcher + signal based process management to a heartbeat based one.  Unfortunately it touches several different parts of RU.  The most important changes are\r\n\r\n  - remove `ru.Process` and `ru.Thread` classes\r\n  - add startup synchronization for heartbeats\r\n  - add callbacks to `ru.Heartbeat` instances (on events and termination)\r\n  - have ZMQ bridges host a heartbeat instance\r\n  - sandbox `ru.Daemon` instances\r\n  - isolate ZMQ bridge and channel configuration\r\n\r\nThere are a number of related minor changes though, which mostly center around configuration, logging and debugging:\r\n\r\n  - add logging capabilities to daemonized processes and bridges\r\n  - simplify debug helper (reduce `ru.Process` support), improve debug of thread locks\r\n  - fixes to the configuration system, specifically to config merges and type preservation / conversion\r\n  - API consistency, specifically wrt. namespaces on logging, profiling, debugging and configuration\r\n\r\nI'd be happy to interactively help with the review process, just let me 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