{"action":"created","issue":{"url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/1441","repository_url":"https://api.github.com/repos/Clinical-Genomics/scout","labels_url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/1441/labels{/name}","comments_url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/1441/comments","events_url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/1441/events","html_url":"https://github.com/Clinical-Genomics/scout/pull/1441","id":516108187,"node_id":"MDExOlB1bGxSZXF1ZXN0MzM1NDE4NzUw","number":1441,"title":"bugfix: Case loading crashes if CLNACC is an integer","user":{"login":"bjhall","id":11991860,"node_id":"MDQ6VXNlcjExOTkxODYw","avatar_url":"https://avatars2.githubusercontent.com/u/11991860?v=4","gravatar_id":"","url":"https://api.github.com/users/bjhall","html_url":"https://github.com/bjhall","followers_url":"https://api.github.com/users/bjhall/followers","following_url":"https://api.github.com/users/bjhall/following{/other_user}","gists_url":"https://api.github.com/users/bjhall/gists{/gist_id}","starred_url":"https://api.github.com/users/bjhall/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bjhall/subscriptions","organizations_url":"https://api.github.com/users/bjhall/orgs","repos_url":"https://api.github.com/users/bjhall/repos","events_url":"https://api.github.com/users/bjhall/events{/privacy}","received_events_url":"https://api.github.com/users/bjhall/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2019-11-01T13:20:43Z","updated_at":"2019-11-01T13:25:04Z","closed_at":null,"author_association":"CONTRIBUTOR","pull_request":{"url":"https://api.github.com/repos/Clinical-Genomics/scout/pulls/1441","html_url":"https://github.com/Clinical-Genomics/scout/pull/1441","diff_url":"https://github.com/Clinical-Genomics/scout/pull/1441.diff","patch_url":"https://github.com/Clinical-Genomics/scout/pull/1441.patch"},"body":"We have CLNACC as an integer in our VCFs. Since 59559116901fe189fa7b46e7f7bdeb3bed6e95a6 this causes case loading to crash with this error:\r\n\r\n```\r\n  File \"/opt/scout/scout/parse/variant/clnsig.py\", line 45, in parse_clnsig\r\n    if acc.isdigit():\r\nAttributeError: 'int' object has no attribute 'isdigit'\r\n```\r\n\r\nWhich makes sense, since isdigit() is a string method. \r\n\r\nThis PR fixes this error. :)"},"comment":{"url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/comments/548786595","html_url":"https://github.com/Clinical-Genomics/scout/pull/1441#issuecomment-548786595","issue_url":"https://api.github.com/repos/Clinical-Genomics/scout/issues/1441","id":548786595,"node_id":"MDEyOklzc3VlQ29tbWVudDU0ODc4NjU5NQ==","user":{"login":"dnil","id":758570,"node_id":"MDQ6VXNlcjc1ODU3MA==","avatar_url":"https://avatars3.githubusercontent.com/u/758570?v=4","gravatar_id":"","url":"https://api.github.com/users/dnil","html_url":"https://github.com/dnil","followers_url":"https://api.github.com/users/dnil/followers","following_url":"https://api.github.com/users/dnil/following{/other_user}","gists_url":"https://api.github.com/users/dnil/gists{/gist_id}","starred_url":"https://api.github.com/users/dnil/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dnil/subscriptions","organizations_url":"https://api.github.com/users/dnil/orgs","repos_url":"https://api.github.com/users/dnil/repos","events_url":"https://api.github.com/users/dnil/events{/privacy}","received_events_url":"https://api.github.com/users/dnil/received_events","type":"User","site_admin":false},"created_at":"2019-11-01T13:25:04Z","updated_at":"2019-11-01T13:25:04Z","author_association":"COLLABORATOR","body":"> As usual I've forgotten to update CHANGELOG. But I think this falls under \"various bugfixes\"\r\n\r\nHehe, ok!"}}
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