{"action":"created","issue":{"url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/189","repository_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io","labels_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/189/labels{/name}","comments_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/189/comments","events_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/189/events","html_url":"https://github.com/sciprog-sfu/sciprog-sfu.github.io/issues/189","id":351872480,"node_id":"MDU6SXNzdWUzNTE4NzI0ODA=","number":189,"title":"\"Intro to Bioinformatics with R\" by Lisa N. Cao","user":{"login":"lfunderburk","id":13559004,"node_id":"MDQ6VXNlcjEzNTU5MDA0","avatar_url":"https://avatars2.githubusercontent.com/u/13559004?v=4","gravatar_id":"","url":"https://api.github.com/users/lfunderburk","html_url":"https://github.com/lfunderburk","followers_url":"https://api.github.com/users/lfunderburk/followers","following_url":"https://api.github.com/users/lfunderburk/following{/other_user}","gists_url":"https://api.github.com/users/lfunderburk/gists{/gist_id}","starred_url":"https://api.github.com/users/lfunderburk/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lfunderburk/subscriptions","organizations_url":"https://api.github.com/users/lfunderburk/orgs","repos_url":"https://api.github.com/users/lfunderburk/repos","events_url":"https://api.github.com/users/lfunderburk/events{/privacy}","received_events_url":"https://api.github.com/users/lfunderburk/received_events","type":"User","site_admin":false},"labels":[{"id":233977073,"node_id":"MDU6TGFiZWwyMzM5NzcwNzM=","url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/labels/workshop","name":"workshop","color":"009800","default":false}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":{"url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/milestones/7","html_url":"https://github.com/sciprog-sfu/sciprog-sfu.github.io/milestone/7","labels_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/milestones/7/labels","id":3580980,"node_id":"MDk6TWlsZXN0b25lMzU4MDk4MA==","number":7,"title":"Fall 2018","description":null,"creator":{"login":"lfunderburk","id":13559004,"node_id":"MDQ6VXNlcjEzNTU5MDA0","avatar_url":"https://avatars2.githubusercontent.com/u/13559004?v=4","gravatar_id":"","url":"https://api.github.com/users/lfunderburk","html_url":"https://github.com/lfunderburk","followers_url":"https://api.github.com/users/lfunderburk/followers","following_url":"https://api.github.com/users/lfunderburk/following{/other_user}","gists_url":"https://api.github.com/users/lfunderburk/gists{/gist_id}","starred_url":"https://api.github.com/users/lfunderburk/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lfunderburk/subscriptions","organizations_url":"https://api.github.com/users/lfunderburk/orgs","repos_url":"https://api.github.com/users/lfunderburk/repos","events_url":"https://api.github.com/users/lfunderburk/events{/privacy}","received_events_url":"https://api.github.com/users/lfunderburk/received_events","type":"User","site_admin":false},"open_issues":7,"closed_issues":1,"state":"open","created_at":"2018-08-19T04:00:39Z","updated_at":"2018-09-07T22:14:17Z","due_on":null,"closed_at":null},"comments":9,"created_at":"2018-08-19T04:14:18Z","updated_at":"2018-09-24T21:27:21Z","closed_at":null,"author_association":"MEMBER","body":"## Description\r\n\r\nThis workshop covers an introduction to Bioinformatics with R. In this workshop, participants will have an opportunity to learn about packages such as Bioconductor https://www.bioconductor.org/ as well as SeqnR.\r\n\r\n## Requirements\r\n\r\nThe following are instructions on how to set up your environment in preparation for the Introduction to Bioinformatics with R workshop, please save some space (let's say 50mb) for datasets.\r\n\r\nRequires: R version 3.5.0 (version can be changed if multiple versions are installed locally, but takes awhile to download so please have it ahead of time), RStudio. It is also handy to have a text editor that is good for code such as emacs or notepad++.\r\n\r\nEnvironment Setup:\r\nBioconductor official install guide: https://www.bioconductor.org/install/\r\n\r\n#### install bioconductor base and dependencies\r\nsource(\"https://bioconductor.org/biocLite.R\")\r\n\r\n#### update bioconductor base\r\nbiocLite()\r\n\r\n#### Additional packages in Bioconductor (for personal interest only): https://www.bioconductor.org/packages/release/BiocViews.html#___Software\r\n\r\n#### Install package SeqnR instructions http://r-forge.r-project.org/R/?group_id=220\r\n##### if you are having compiling issues try\r\ninstall.packages(\"http://download.r-forge.r-project.org/bin/windows/contrib/latest.old/seqinr_3.4-6.zip\", repos=NULL)\r\n\r\n## Time and Place\r\n\r\n**Where:** Room 7200, Library Research Commons, SFU Burnaby Campus\r\n\r\n**When:** Tuesday, September 25, 2018 at 3:00 PM\r\n\r\n## Registration\r\n\r\n## Lesson"},"comment":{"url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/comments/424131179","html_url":"https://github.com/sciprog-sfu/sciprog-sfu.github.io/issues/189#issuecomment-424131179","issue_url":"https://api.github.com/repos/sciprog-sfu/sciprog-sfu.github.io/issues/189","id":424131179,"node_id":"MDEyOklzc3VlQ29tbWVudDQyNDEzMTE3OQ==","user":{"login":"lisancao","id":20377512,"node_id":"MDQ6VXNlcjIwMzc3NTEy","avatar_url":"https://avatars2.githubusercontent.com/u/20377512?v=4","gravatar_id":"","url":"https://api.github.com/users/lisancao","html_url":"https://github.com/lisancao","followers_url":"https://api.github.com/users/lisancao/followers","following_url":"https://api.github.com/users/lisancao/following{/other_user}","gists_url":"https://api.github.com/users/lisancao/gists{/gist_id}","starred_url":"https://api.github.com/users/lisancao/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lisancao/subscriptions","organizations_url":"https://api.github.com/users/lisancao/orgs","repos_url":"https://api.github.com/users/lisancao/repos","events_url":"https://api.github.com/users/lisancao/events{/privacy}","received_events_url":"https://api.github.com/users/lisancao/received_events","type":"User","site_admin":false},"created_at":"2018-09-24T21:27:21Z","updated_at":"2018-09-24T21:27:21Z","author_association":"NONE","body":"Hi Laura,\n\nMy apologies, I misunderstood. I can meet you before then if you'd like,\nbut 45 minutes early is a lot. Will there be no other organizers able to\nmake it? My email is lncao@sfu.ca, if you could forward them my information\nthat would be great. If not I don't mind coming in super early for setup.\n\nUntil the next,\nLisa N. Cao\n\n\nOn Mon, Sep 24, 2018 at 1:39 PM Laura Gutierrez Funderburk <\nnotifications@github.com> wrote:\n\n> Hello Lisa,\n>\n> I can meet you at the library entrance. Unfortunately my class runs from\n> 2:30 - 3:30 so I would not be able to meet you after my class is over, but\n> I can meet you before.\n>\n> What is your email address? I can forward it to Research Commons so they\n> can get in touch with you. They have provided sticky notes in the past and\n> can help with the room.\n>\n> Laura\n>\n> —\n> You are receiving this because you were mentioned.\n> Reply to this email directly, view it on GitHub\n> <https://github.com/sciprog-sfu/sciprog-sfu.github.io/issues/189#issuecomment-424116857>,\n> or mute the thread\n> <https://github.com/notifications/unsubscribe-auth/ATbvqGB4doBR4ZqwcaDJ2dhbdSqiX0iZks5ueULygaJpZM4WC0gL>\n> .\n>\n"}}
{"actor":{"display_login":"lisancao"}}