{"action":"created","issue":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/2203","repository_url":"https://api.github.com/repos/galaxyproject/tools-iuc","labels_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/2203/labels{/name}","comments_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/2203/comments","events_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/2203/events","html_url":"https://github.com/galaxyproject/tools-iuc/pull/2203","id":388343143,"node_id":"MDExOlB1bGxSZXF1ZXN0MjM2NjMwMDM0","number":2203,"title":"Fix DESeq2 with tximport from Ensembl GTF annotation. Add test","user":{"login":"nsoranzo","id":4924623,"node_id":"MDQ6VXNlcjQ5MjQ2MjM=","avatar_url":"https://avatars2.githubusercontent.com/u/4924623?v=4","gravatar_id":"","url":"https://api.github.com/users/nsoranzo","html_url":"https://github.com/nsoranzo","followers_url":"https://api.github.com/users/nsoranzo/followers","following_url":"https://api.github.com/users/nsoranzo/following{/other_user}","gists_url":"https://api.github.com/users/nsoranzo/gists{/gist_id}","starred_url":"https://api.github.com/users/nsoranzo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nsoranzo/subscriptions","organizations_url":"https://api.github.com/users/nsoranzo/orgs","repos_url":"https://api.github.com/users/nsoranzo/repos","events_url":"https://api.github.com/users/nsoranzo/events{/privacy}","received_events_url":"https://api.github.com/users/nsoranzo/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-12-06T18:35:58Z","updated_at":"2018-12-06T20:18:12Z","closed_at":"2018-12-06T20:18:09Z","author_association":"MEMBER","pull_request":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/pulls/2203","html_url":"https://github.com/galaxyproject/tools-iuc/pull/2203","diff_url":"https://github.com/galaxyproject/tools-iuc/pull/2203.diff","patch_url":"https://github.com/galaxyproject/tools-iuc/pull/2203.patch"},"body":"FOR CONTRIBUTOR:\r\n* [x] - I have read the [CONTRIBUTING.md](https://github.com/galaxyproject/tools-iuc/blob/master/CONTRIBUTING.md) document and this tool is appropriate for the tools-iuc repo.\r\n* [ ] - License permits unrestricted use (educational + commercial)\r\n* [ ] - This PR adds a new tool or tool collection\r\n* [x] - This PR updates an existing tool or tool collection\r\n* [ ] - This PR does something else (explain below)\r\n\r\nFOR REVIEWER:\r\n* [ ] .shed.yml file ok\r\n    - [ ] Toolshed user `iuc` has access to associated toolshed repo(s)\r\n* [ ] Indentation is correct (4 spaces)\r\n* [ ] Tool version/build ok\r\n* [ ] `<command/>`\r\n  - [ ] Text parameters, input and output files `'single quoted'`\r\n  - [ ] Use of `<![CDATA[ ... ]]>` tags\r\n  - [ ] Parameters of type `text` or having `optional=\"true\"` attribute are checked with `if str($param)` before being used\r\n* [ ] Data parameters have a `format` attribute containing datatypes recognised by Galaxy\r\n* [ ] Tests\r\n  - [ ] Parameters are reasonably covered\r\n  - [ ] Test files are appropriate\r\n* [ ] Help\r\n  - [ ] Valid restructuredText and uses `<![CDATA[ ... ]]>` tags\r\n* [ ] Complies with other best practice in [Best Practices Doc](http://galaxy-iuc-standards.readthedocs.io/en/latest/best_practices/tool_xml.html)\r\n"},"comment":{"url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/comments/445015319","html_url":"https://github.com/galaxyproject/tools-iuc/pull/2203#issuecomment-445015319","issue_url":"https://api.github.com/repos/galaxyproject/tools-iuc/issues/2203","id":445015319,"node_id":"MDEyOklzc3VlQ29tbWVudDQ0NTAxNTMxOQ==","user":{"login":"bgruening","id":469983,"node_id":"MDQ6VXNlcjQ2OTk4Mw==","avatar_url":"https://avatars2.githubusercontent.com/u/469983?v=4","gravatar_id":"","url":"https://api.github.com/users/bgruening","html_url":"https://github.com/bgruening","followers_url":"https://api.github.com/users/bgruening/followers","following_url":"https://api.github.com/users/bgruening/following{/other_user}","gists_url":"https://api.github.com/users/bgruening/gists{/gist_id}","starred_url":"https://api.github.com/users/bgruening/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgruening/subscriptions","organizations_url":"https://api.github.com/users/bgruening/orgs","repos_url":"https://api.github.com/users/bgruening/repos","events_url":"https://api.github.com/users/bgruening/events{/privacy}","received_events_url":"https://api.github.com/users/bgruening/received_events","type":"User","site_admin":false},"created_at":"2018-12-06T20:18:12Z","updated_at":"2018-12-06T20:18:12Z","author_association":"MEMBER","body":"Merci."}}
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