{"action":"created","issue":{"url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/33","repository_url":"https://api.github.com/repos/Ecogenomics/GTDBTk","labels_url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/33/labels{/name}","comments_url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/33/comments","events_url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/33/events","html_url":"https://github.com/Ecogenomics/GTDBTk/issues/33","id":356354989,"node_id":"MDU6SXNzdWUzNTYzNTQ5ODk=","number":33,"title":"Interpretation of the results","user":{"login":"zhssakura","id":27931331,"node_id":"MDQ6VXNlcjI3OTMxMzMx","avatar_url":"https://avatars2.githubusercontent.com/u/27931331?v=4","gravatar_id":"","url":"https://api.github.com/users/zhssakura","html_url":"https://github.com/zhssakura","followers_url":"https://api.github.com/users/zhssakura/followers","following_url":"https://api.github.com/users/zhssakura/following{/other_user}","gists_url":"https://api.github.com/users/zhssakura/gists{/gist_id}","starred_url":"https://api.github.com/users/zhssakura/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/zhssakura/subscriptions","organizations_url":"https://api.github.com/users/zhssakura/orgs","repos_url":"https://api.github.com/users/zhssakura/repos","events_url":"https://api.github.com/users/zhssakura/events{/privacy}","received_events_url":"https://api.github.com/users/zhssakura/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-09-03T04:32:42Z","updated_at":"2018-09-03T04:40:10Z","closed_at":null,"author_association":"NONE","body":"Hi @dparks1134 ,\r\n\r\nIn the file ‘gtdbtk.ar122.summary.tsv’, the red values are as following:\r\n\r\n**user_genome\t\t\tclassification_method\t\tred_value\r\nD6_st10_Refined_2\tRED\t\t\t\t\t0.922680053818\r\nB06_st5_Refined_1\tRED\t\t\t\t\t0.922131231105\r\nH8_st7_Refined_2\t\tRED\t\t\t\t\t0.921282265825\r\nH13_st5_Refined_3\tRED\t\t\t\t\t0.921264499811**\r\n\r\nAnd I also found this info in the file of 'gtdbtk.ar122.red_dictionary.tsv’:\r\nPhylum\t0.227534847987\r\nClass\t0.35320600176\r\nOrder\t0.553905413445\r\nFamily\t0.732652342427\r\nGenus\t0.910973866402\r\n\r\nDoes that mean, these four genomes (D6, B06, H8 and H13) belong to the same genus, however can not sure if they belong to the same species?\r\n\r\nThank you very much!"},"comment":{"url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/comments/417998334","html_url":"https://github.com/Ecogenomics/GTDBTk/issues/33#issuecomment-417998334","issue_url":"https://api.github.com/repos/Ecogenomics/GTDBTk/issues/33","id":417998334,"node_id":"MDEyOklzc3VlQ29tbWVudDQxNzk5ODMzNA==","user":{"login":"dparks1134","id":3688336,"node_id":"MDQ6VXNlcjM2ODgzMzY=","avatar_url":"https://avatars3.githubusercontent.com/u/3688336?v=4","gravatar_id":"","url":"https://api.github.com/users/dparks1134","html_url":"https://github.com/dparks1134","followers_url":"https://api.github.com/users/dparks1134/followers","following_url":"https://api.github.com/users/dparks1134/following{/other_user}","gists_url":"https://api.github.com/users/dparks1134/gists{/gist_id}","starred_url":"https://api.github.com/users/dparks1134/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dparks1134/subscriptions","organizations_url":"https://api.github.com/users/dparks1134/orgs","repos_url":"https://api.github.com/users/dparks1134/repos","events_url":"https://api.github.com/users/dparks1134/events{/privacy}","received_events_url":"https://api.github.com/users/dparks1134/received_events","type":"User","site_admin":false},"created_at":"2018-09-03T04:40:10Z","updated_at":"2018-09-03T04:40:10Z","author_association":"COLLABORATOR","body":"What was the taxonomy assigned to each of these genomes by the GTDB-Tk?"}}
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