{"action":"created","issue":{"url":"https://api.github.com/repos/deeptools/deepTools/issues/672","repository_url":"https://api.github.com/repos/deeptools/deepTools","labels_url":"https://api.github.com/repos/deeptools/deepTools/issues/672/labels{/name}","comments_url":"https://api.github.com/repos/deeptools/deepTools/issues/672/comments","events_url":"https://api.github.com/repos/deeptools/deepTools/issues/672/events","html_url":"https://github.com/deeptools/deepTools/issues/672","id":300060241,"number":672,"title":"[Feature Request]: New plotting function: Plot track","user":{"login":"zfrenchee","id":2761597,"avatar_url":"https://avatars0.githubusercontent.com/u/2761597?v=4","gravatar_id":"","url":"https://api.github.com/users/zfrenchee","html_url":"https://github.com/zfrenchee","followers_url":"https://api.github.com/users/zfrenchee/followers","following_url":"https://api.github.com/users/zfrenchee/following{/other_user}","gists_url":"https://api.github.com/users/zfrenchee/gists{/gist_id}","starred_url":"https://api.github.com/users/zfrenchee/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/zfrenchee/subscriptions","organizations_url":"https://api.github.com/users/zfrenchee/orgs","repos_url":"https://api.github.com/users/zfrenchee/repos","events_url":"https://api.github.com/users/zfrenchee/events{/privacy}","received_events_url":"https://api.github.com/users/zfrenchee/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":7,"created_at":"2018-02-25T20:54:56Z","updated_at":"2018-02-27T22:10:38Z","closed_at":"2018-02-25T21:23:43Z","author_association":"NONE","body":"@bgruening (and others) feel free to close this if you believe it is out of scope. \r\n\r\nI'd love to see a function added to this library for plotting tracks. E.g.:\r\n\r\n![image](https://user-images.githubusercontent.com/2761597/36646313-12603ca4-1a44-11e8-8067-1e0c6ddc1c7f.png)\r\n\r\nI know these can be visualized on a genome browser (e.g. UCSC) but I'd like to just generate images, ideally beautiful ones like the other deepTools visualization tools. \r\n\r\nThanks,\r\n\r\n"},"comment":{"url":"https://api.github.com/repos/deeptools/deepTools/issues/comments/369044829","html_url":"https://github.com/deeptools/deepTools/issues/672#issuecomment-369044829","issue_url":"https://api.github.com/repos/deeptools/deepTools/issues/672","id":369044829,"user":{"login":"fidelram","id":4964309,"avatar_url":"https://avatars3.githubusercontent.com/u/4964309?v=4","gravatar_id":"","url":"https://api.github.com/users/fidelram","html_url":"https://github.com/fidelram","followers_url":"https://api.github.com/users/fidelram/followers","following_url":"https://api.github.com/users/fidelram/following{/other_user}","gists_url":"https://api.github.com/users/fidelram/gists{/gist_id}","starred_url":"https://api.github.com/users/fidelram/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/fidelram/subscriptions","organizations_url":"https://api.github.com/users/fidelram/orgs","repos_url":"https://api.github.com/users/fidelram/repos","events_url":"https://api.github.com/users/fidelram/events{/privacy}","received_events_url":"https://api.github.com/users/fidelram/received_events","type":"User","site_admin":false},"created_at":"2018-02-27T22:10:37Z","updated_at":"2018-02-27T22:10:37Z","author_association":"COLLABORATOR","body":"you can use hicPlotTADs without Hi-C data.. at least for the command line\nversion. I am not sure if the galaxy wrapper force to have Hi-C data\n\nOn Mon, Feb 26, 2018 at 3:59 PM Alexander Lenail <notifications@github.com>\nwrote:\n\n> @fidelram <https://github.com/fidelram> This might not be an optimal\n> solution, since I'm not hoping to plot TADs from HiC data. @dpryan79\n> <https://github.com/dpryan79> I would definitely much appreciate if\n> plotting BEDs/bigwigs with pyGenomeTracks were possible on Galaxy, but I\n> wouldn't say it's the most important thing to me.\n>\n> —\n> You are receiving this because you were mentioned.\n>\n>\n> Reply to this email directly, view it on GitHub\n> <https://github.com/deeptools/deepTools/issues/672#issuecomment-368530226>,\n> or mute the thread\n> <https://github.com/notifications/unsubscribe-auth/AEu_1Q1Dp4yG6p8y6Zh6YT_CZDdt8mbAks5tYsa1gaJpZM4SSdFR>\n> .\n>\n"}}
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