{"action":"created","issue":{"url":"https://api.github.com/repos/jotsetung/ensembldb/issues/77","repository_url":"https://api.github.com/repos/jotsetung/ensembldb","labels_url":"https://api.github.com/repos/jotsetung/ensembldb/issues/77/labels{/name}","comments_url":"https://api.github.com/repos/jotsetung/ensembldb/issues/77/comments","events_url":"https://api.github.com/repos/jotsetung/ensembldb/issues/77/events","html_url":"https://github.com/jotsetung/ensembldb/issues/77","id":302673119,"number":77,"title":"Add mapping of transcripts to NCBI RefSeq","user":{"login":"jotsetung","id":5506112,"avatar_url":"https://avatars3.githubusercontent.com/u/5506112?v=4","gravatar_id":"","url":"https://api.github.com/users/jotsetung","html_url":"https://github.com/jotsetung","followers_url":"https://api.github.com/users/jotsetung/followers","following_url":"https://api.github.com/users/jotsetung/following{/other_user}","gists_url":"https://api.github.com/users/jotsetung/gists{/gist_id}","starred_url":"https://api.github.com/users/jotsetung/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jotsetung/subscriptions","organizations_url":"https://api.github.com/users/jotsetung/orgs","repos_url":"https://api.github.com/users/jotsetung/repos","events_url":"https://api.github.com/users/jotsetung/events{/privacy}","received_events_url":"https://api.github.com/users/jotsetung/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2018-03-06T11:59:29Z","updated_at":"2018-03-07T10:10:39Z","closed_at":null,"author_association":"OWNER","body":"Could add a mapping of Ensembl transcript IDs to NCBI RefSeq ID(s?).\r\n\r\nIn the Perl API:\r\n```\r\nmy @dbentries = @{ $transcript->get_all_DBEntries() };\r\n```\r\nOn the db entry: `dbname()` to get the name of the database, `primary_id()` or `display_id()` to get the externtal identifier."},"comment":{"url":"https://api.github.com/repos/jotsetung/ensembldb/issues/comments/371089566","html_url":"https://github.com/jotsetung/ensembldb/issues/77#issuecomment-371089566","issue_url":"https://api.github.com/repos/jotsetung/ensembldb/issues/77","id":371089566,"user":{"login":"jotsetung","id":5506112,"avatar_url":"https://avatars3.githubusercontent.com/u/5506112?v=4","gravatar_id":"","url":"https://api.github.com/users/jotsetung","html_url":"https://github.com/jotsetung","followers_url":"https://api.github.com/users/jotsetung/followers","following_url":"https://api.github.com/users/jotsetung/following{/other_user}","gists_url":"https://api.github.com/users/jotsetung/gists{/gist_id}","starred_url":"https://api.github.com/users/jotsetung/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jotsetung/subscriptions","organizations_url":"https://api.github.com/users/jotsetung/orgs","repos_url":"https://api.github.com/users/jotsetung/repos","events_url":"https://api.github.com/users/jotsetung/events{/privacy}","received_events_url":"https://api.github.com/users/jotsetung/received_events","type":"User","site_admin":false},"created_at":"2018-03-07T10:10:39Z","updated_at":"2018-03-07T10:10:39Z","author_association":"OWNER","body":"While adding the mapping of Ensembl ids to RefSeq ids is trivial, providing a mapping between positions in RefSeq sequences to positions in Ensembl transcript sequences is not: we can not assume the sequences being identical, even if the IDs are mapped."}}
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