{"action":"created","issue":{"url":"https://api.github.com/repos/elabftw/elabftw/issues/813","repository_url":"https://api.github.com/repos/elabftw/elabftw","labels_url":"https://api.github.com/repos/elabftw/elabftw/issues/813/labels{/name}","comments_url":"https://api.github.com/repos/elabftw/elabftw/issues/813/comments","events_url":"https://api.github.com/repos/elabftw/elabftw/issues/813/events","html_url":"https://github.com/elabftw/elabftw/issues/813","id":350920580,"node_id":"MDU6SXNzdWUzNTA5MjA1ODA=","number":813,"title":"Linux upgrade broke elabftw","user":{"login":"cbgorman","id":18536785,"node_id":"MDQ6VXNlcjE4NTM2Nzg1","avatar_url":"https://avatars3.githubusercontent.com/u/18536785?v=4","gravatar_id":"","url":"https://api.github.com/users/cbgorman","html_url":"https://github.com/cbgorman","followers_url":"https://api.github.com/users/cbgorman/followers","following_url":"https://api.github.com/users/cbgorman/following{/other_user}","gists_url":"https://api.github.com/users/cbgorman/gists{/gist_id}","starred_url":"https://api.github.com/users/cbgorman/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cbgorman/subscriptions","organizations_url":"https://api.github.com/users/cbgorman/orgs","repos_url":"https://api.github.com/users/cbgorman/repos","events_url":"https://api.github.com/users/cbgorman/events{/privacy}","received_events_url":"https://api.github.com/users/cbgorman/received_events","type":"User","site_admin":false},"labels":[{"id":522451757,"node_id":"MDU6TGFiZWw1MjI0NTE3NTc=","url":"https://api.github.com/repos/elabftw/elabftw/labels/support","name":"support","color":"0052cc","default":false}],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":11,"created_at":"2018-08-15T18:43:44Z","updated_at":"2018-08-17T03:46:11Z","closed_at":"2018-08-17T03:46:11Z","author_association":"NONE","body":"# Description of the problem\r\n\r\nI updated my digital ocean droplet to the latest version of linux, and now elab doesn't work.  It looks like the update got rid of php and nginx and broke mysql.\r\n\r\nroot@Gorman:~# elabctl restart\r\nRemoving elabftw ... done\r\nRemoving mysql ... done\r\nCreating mysql\r\n\r\nERROR: for mysql  Cannot start service mysql: invalid header field value \"oci runtime error: container_linux.go:247: starting container process caused \\\"process_linux.go:359: container init caused \\\\\\\"rootfs_linux.go:53: mounting \\\\\\\\\\\\\\\"cgroup\\\\\\\\\\\\\\\" to rootfs \\\\\\\\\\\\\\\"/var/lib/docker/aufs/mnt/8032577a45d6a3087a98940431d358262f5c849054fee30fd3c18860b1d29bea\\\\\\\\\\\\\\\" at \\\\\\\\\\\\\\\"/sys/fs/cgroup\\\\\\\\\\\\\\\" caused \\\\\\\\\\\\\\\"no subsystem for mount\\\\\\\\\\\\\\\"\\\\\\\"\\\"\\n\"\r\nERROR: Encountered errors while bringing up the project.\r\n\r\nroot@Gorman:~# mysql\r\nERROR 2002 (HY000): Can't connect to local MySQL server through socket '/var/run/mysqld/mysqld.sock' (2)\r\n\r\nroot@Gorman:/var/log/apt# php -v\r\n\r\nCommand 'php' not found, but can be installed with:\r\n\r\napt install php7.2-cli\r\napt install hhvm\r\n\r\nroot@Gorman:/var/log/apt# nginx -v\r\n\r\nCommand 'nginx' not found, but can be installed with:\r\n\r\napt install nginx-core\r\napt install nginx-extras\r\napt install nginx-full\r\napt install nginx-light\r\n\r\n\r\n\r\n# Informations\r\n\r\n* Elabftw version (visible in Sysadmin panel) : 2.0\r\n* Installation method (git, docker or zip archive) : docker\r\n* Operating system + version : Ubuntu 18.04.1 LTS\r\n* Browser used (firefox/chrome) : chrome\r\n\r\nFor git/zip installation method:\r\n\r\n* PHP version: \r\n* MySQL version:\r\n* Webserver (apache/nginx) + version :\r\n"},"comment":{"url":"https://api.github.com/repos/elabftw/elabftw/issues/comments/413749459","html_url":"https://github.com/elabftw/elabftw/issues/813#issuecomment-413749459","issue_url":"https://api.github.com/repos/elabftw/elabftw/issues/813","id":413749459,"node_id":"MDEyOklzc3VlQ29tbWVudDQxMzc0OTQ1OQ==","user":{"login":"NicolasCARPi","id":3043706,"node_id":"MDQ6VXNlcjMwNDM3MDY=","avatar_url":"https://avatars3.githubusercontent.com/u/3043706?v=4","gravatar_id":"","url":"https://api.github.com/users/NicolasCARPi","html_url":"https://github.com/NicolasCARPi","followers_url":"https://api.github.com/users/NicolasCARPi/followers","following_url":"https://api.github.com/users/NicolasCARPi/following{/other_user}","gists_url":"https://api.github.com/users/NicolasCARPi/gists{/gist_id}","starred_url":"https://api.github.com/users/NicolasCARPi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/NicolasCARPi/subscriptions","organizations_url":"https://api.github.com/users/NicolasCARPi/orgs","repos_url":"https://api.github.com/users/NicolasCARPi/repos","events_url":"https://api.github.com/users/NicolasCARPi/events{/privacy}","received_events_url":"https://api.github.com/users/NicolasCARPi/received_events","type":"User","site_admin":false},"created_at":"2018-08-17T03:46:11Z","updated_at":"2018-08-17T03:46:11Z","author_association":"CONTRIBUTOR","body":"Yes upgrading docker is probably the correct way to deal with the situation :)"}}
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