{"action":"created","issue":{"url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/79","repository_url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl","labels_url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/79/labels{/name}","comments_url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/79/comments","events_url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/79/events","html_url":"https://github.com/crsl4/PhyloNetworks.jl/pull/79","id":337391019,"node_id":"MDExOlB1bGxSZXF1ZXN0MTk4NTg3NDA2","number":79,"title":"Using Documenter's new options","user":{"login":"pbastide","id":9268479,"node_id":"MDQ6VXNlcjkyNjg0Nzk=","avatar_url":"https://avatars2.githubusercontent.com/u/9268479?v=4","gravatar_id":"","url":"https://api.github.com/users/pbastide","html_url":"https://github.com/pbastide","followers_url":"https://api.github.com/users/pbastide/followers","following_url":"https://api.github.com/users/pbastide/following{/other_user}","gists_url":"https://api.github.com/users/pbastide/gists{/gist_id}","starred_url":"https://api.github.com/users/pbastide/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pbastide/subscriptions","organizations_url":"https://api.github.com/users/pbastide/orgs","repos_url":"https://api.github.com/users/pbastide/repos","events_url":"https://api.github.com/users/pbastide/events{/privacy}","received_events_url":"https://api.github.com/users/pbastide/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":12,"created_at":"2018-07-02T06:55:27Z","updated_at":"2018-07-04T16:09:47Z","closed_at":"2018-07-04T14:55:24Z","author_association":"COLLABORATOR","pull_request":{"url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/pulls/79","html_url":"https://github.com/crsl4/PhyloNetworks.jl/pull/79","diff_url":"https://github.com/crsl4/PhyloNetworks.jl/pull/79.diff","patch_url":"https://github.com/crsl4/PhyloNetworks.jl/pull/79.patch"},"body":"This is a rewrite of the documentation to run Julia example code with `Documenter` instead of `Weave`.\r\n\r\nSee `docs/readme.md` for details.\r\n\r\nFor the rewriting to be complete, all the files `docs/src/man/src/*.jmd` must be translated into `docs/src/man/*.md`. When such a file is translated, the associated line in `docs/mkdocs/yml` can be un-commented."},"comment":{"url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/comments/402518695","html_url":"https://github.com/crsl4/PhyloNetworks.jl/pull/79#issuecomment-402518695","issue_url":"https://api.github.com/repos/crsl4/PhyloNetworks.jl/issues/79","id":402518695,"node_id":"MDEyOklzc3VlQ29tbWVudDQwMjUxODY5NQ==","user":{"login":"pbastide","id":9268479,"node_id":"MDQ6VXNlcjkyNjg0Nzk=","avatar_url":"https://avatars2.githubusercontent.com/u/9268479?v=4","gravatar_id":"","url":"https://api.github.com/users/pbastide","html_url":"https://github.com/pbastide","followers_url":"https://api.github.com/users/pbastide/followers","following_url":"https://api.github.com/users/pbastide/following{/other_user}","gists_url":"https://api.github.com/users/pbastide/gists{/gist_id}","starred_url":"https://api.github.com/users/pbastide/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pbastide/subscriptions","organizations_url":"https://api.github.com/users/pbastide/orgs","repos_url":"https://api.github.com/users/pbastide/repos","events_url":"https://api.github.com/users/pbastide/events{/privacy}","received_events_url":"https://api.github.com/users/pbastide/received_events","type":"User","site_admin":false},"created_at":"2018-07-04T16:09:47Z","updated_at":"2018-07-04T16:09:47Z","author_association":"COLLABORATOR","body":"Could this be just an issue related to the merging ?\r\n\r\nThe doc page you point to does not have the latest changes: for instance, it does not have the warning we added about model orders in function `ftest` (that should be in [this section](http://crsl4.github.io/PhyloNetworks.jl/latest/man/trait_tree/#Fit-of-a-Shifted-BM-1)).\r\n\r\nOn the [gh-pages](https://github.com/crsl4/PhyloNetworks.jl/tree/gh-pages/latest) branch, the figures are based on the latest merge commit (6204bc4), but the man pages on the one before (e29fc38). Maybe the issue could go away at the next commit on master ? (I'm optimistic...)"}}
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