{"action":"created","issue":{"url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/4","repository_url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4","labels_url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/4/labels{/name}","comments_url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/4/comments","events_url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/4/events","html_url":"https://github.com/verbal-autopsy-software/InterVA4/issues/4","id":392121138,"node_id":"MDU6SXNzdWUzOTIxMjExMzg=","number":4,"title":"Question/Enhancement: directory logic","user":{"login":"mboyas-mitre","id":44816138,"node_id":"MDQ6VXNlcjQ0ODE2MTM4","avatar_url":"https://avatars2.githubusercontent.com/u/44816138?v=4","gravatar_id":"","url":"https://api.github.com/users/mboyas-mitre","html_url":"https://github.com/mboyas-mitre","followers_url":"https://api.github.com/users/mboyas-mitre/followers","following_url":"https://api.github.com/users/mboyas-mitre/following{/other_user}","gists_url":"https://api.github.com/users/mboyas-mitre/gists{/gist_id}","starred_url":"https://api.github.com/users/mboyas-mitre/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mboyas-mitre/subscriptions","organizations_url":"https://api.github.com/users/mboyas-mitre/orgs","repos_url":"https://api.github.com/users/mboyas-mitre/repos","events_url":"https://api.github.com/users/mboyas-mitre/events{/privacy}","received_events_url":"https://api.github.com/users/mboyas-mitre/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-12-18T11:49:53Z","updated_at":"2019-01-02T19:55:04Z","closed_at":null,"author_association":"NONE","body":"https://github.com/verbal-autopsy-software/InterVA4/blob/792fd94fcad1f143f55865e580a4ea0bc233e5bb/InterVA4_1.7/R/InterVA.R#L147-L152\r\n\r\nA `globle.directory` variable is created that is equivalent to the `directory` variable.  Why do these two directory variables exist concurrently?"},"comment":{"url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/comments/450967104","html_url":"https://github.com/verbal-autopsy-software/InterVA4/issues/4#issuecomment-450967104","issue_url":"https://api.github.com/repos/verbal-autopsy-software/InterVA4/issues/4","id":450967104,"node_id":"MDEyOklzc3VlQ29tbWVudDQ1MDk2NzEwNA==","user":{"login":"richardli","id":2946093,"node_id":"MDQ6VXNlcjI5NDYwOTM=","avatar_url":"https://avatars3.githubusercontent.com/u/2946093?v=4","gravatar_id":"","url":"https://api.github.com/users/richardli","html_url":"https://github.com/richardli","followers_url":"https://api.github.com/users/richardli/followers","following_url":"https://api.github.com/users/richardli/following{/other_user}","gists_url":"https://api.github.com/users/richardli/gists{/gist_id}","starred_url":"https://api.github.com/users/richardli/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/richardli/subscriptions","organizations_url":"https://api.github.com/users/richardli/orgs","repos_url":"https://api.github.com/users/richardli/repos","events_url":"https://api.github.com/users/richardli/events{/privacy}","received_events_url":"https://api.github.com/users/richardli/received_events","type":"User","site_admin":false},"created_at":"2019-01-02T19:55:04Z","updated_at":"2019-01-02T19:55:04Z","author_association":"COLLABORATOR","body":"It's used later to reset the working directory back to the one before line 152. Alternatively, one can avoid ```setwd``` but paste directories when writing outputs, so this is just a way to avoid specifying directories later."}}
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