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to keep a running log here since there will be a large number of small issues\r\n\r\n- ~Docker instructions link to Docker EE instructions rather than CE~\r\nhttps://docs.docker.com/install/linux/docker-ce/ubuntu/\r\n- ~Under \"Testing Locally\" sample_configs.local.json is missing a file format and thus crashes cwltool with the new cwltool version~\r\n- https://docs.dockstore.org/docs/prereqs/getting-started-with-cwl/#describe-your-tool-in-cwl uses 1.25-6_1.1 but that doesn't exist and doesn't match the docker image built in  https://docs.dockstore.org/docs/prereqs/getting-started-with-docker/#testing-the-docker-image-locally failing the local launch command. (we actually create 1.25-6_1.1 later, doesn't flow well) When fixing this, try out the whole tutorial to check the flow of things\r\n- ~https://docs.dockstore.org/docs/publisher-tutorials/getting-started-with-dockstore/#linking-with-external-services needs updates~\r\n- ~Can mention beta sharing https://docs.dockstore.org/docs/publisher-tutorials/getting-started-with-dockstore/#sharing-the-tool~\r\n  - ~should probably document how to use SAM based sharing in detail on a page linked to this~\r\n- ~next steps should probably link to workflow tutorial with increasing importance of workflows~\r\n- ~https://docs.dockstore.org/docs/publisher-tutorials/workflows/ should talk about difference between tools and workflows in the CWL/WDL context~\r\n\r\n- More TBD"},"comment":{"url":"https://api.github.com/repos/ga4gh/dockstore/issues/comments/420381981","html_url":"https://github.com/ga4gh/dockstore/issues/1758#issuecomment-420381981","issue_url":"https://api.github.com/repos/ga4gh/dockstore/issues/1758","id":420381981,"node_id":"MDEyOklzc3VlQ29tbWVudDQyMDM4MTk4MQ==","user":{"login":"denis-yuen","id":1730679,"node_id":"MDQ6VXNlcjE3MzA2Nzk=","avatar_url":"https://avatars0.githubusercontent.com/u/1730679?v=4","gravatar_id":"","url":"https://api.github.com/users/denis-yuen","html_url":"https://github.com/denis-yuen","followers_url":"https://api.github.com/users/denis-yuen/followers","following_url":"https://api.github.com/users/denis-yuen/following{/other_user}","gists_url":"https://api.github.com/users/denis-yuen/gists{/gist_id}","starred_url":"https://api.github.com/users/denis-yuen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/denis-yuen/subscriptions","organizations_url":"https://api.github.com/users/denis-yuen/orgs","repos_url":"https://api.github.com/users/denis-yuen/repos","events_url":"https://api.github.com/users/denis-yuen/events{/privacy}","received_events_url":"https://api.github.com/users/denis-yuen/received_events","type":"User","site_admin":false},"created_at":"2018-09-11T18:52:34Z","updated_at":"2018-09-11T18:52:34Z","author_association":"MEMBER","body":"Closing in favour of more focused issues"}}
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