{"action":"closed","issue":{"url":"https://api.github.com/repos/OpenGene/fastp/issues/46","repository_url":"https://api.github.com/repos/OpenGene/fastp","labels_url":"https://api.github.com/repos/OpenGene/fastp/issues/46/labels{/name}","comments_url":"https://api.github.com/repos/OpenGene/fastp/issues/46/comments","events_url":"https://api.github.com/repos/OpenGene/fastp/issues/46/events","html_url":"https://github.com/OpenGene/fastp/issues/46","id":309478084,"number":46,"title":"Read names do not match with dual UMIs","user":{"login":"carlandt","id":4896180,"avatar_url":"https://avatars0.githubusercontent.com/u/4896180?v=4","gravatar_id":"","url":"https://api.github.com/users/carlandt","html_url":"https://github.com/carlandt","followers_url":"https://api.github.com/users/carlandt/followers","following_url":"https://api.github.com/users/carlandt/following{/other_user}","gists_url":"https://api.github.com/users/carlandt/gists{/gist_id}","starred_url":"https://api.github.com/users/carlandt/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/carlandt/subscriptions","organizations_url":"https://api.github.com/users/carlandt/orgs","repos_url":"https://api.github.com/users/carlandt/repos","events_url":"https://api.github.com/users/carlandt/events{/privacy}","received_events_url":"https://api.github.com/users/carlandt/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":10,"created_at":"2018-03-28T18:23:23Z","updated_at":"2018-04-17T18:38:04Z","closed_at":"2018-04-17T18:38:03Z","author_association":"NONE","body":"Thank you for making your wonderful tool!\r\n\r\nFor dual-UMI experiments, there may/should be different UMI tags on the forward and reverse read of a pair. Is there an option (now or in development) to remove the UMI tags from each read and place them on both of the resultant reads? Downstream tools require that the read names be the same so if there are different UMI tags on the forward and reverse of a pair, it will fail. Instead it should have the read name, followed by a delimiter between the forward and reverse UMI tags. \r\n\r\nFor instance, in fastq_1.fq.gz\r\nread_1_name:etc:etc:etc:etc:etc:etc:read_1_tag<delim>read_2_tag\r\n\r\nAnd in the pair, fastq_2.fq.gz\r\nread_2_name:etc:etc:etc:etc:etc:etc:read_1_tag<delim>read_2_tag\r\n"}}
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