{"action":"created","issue":{"url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/5","repository_url":"https://api.github.com/repos/Midnighter/BRENDA-Parser","labels_url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/5/labels{/name}","comments_url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/5/comments","events_url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/5/events","html_url":"https://github.com/Midnighter/BRENDA-Parser/issues/5","id":293917562,"number":5,"title":"bug when reading reactions with compounds with \"(\"","user":{"login":"joanarcx","id":18032790,"avatar_url":"https://avatars0.githubusercontent.com/u/18032790?v=4","gravatar_id":"","url":"https://api.github.com/users/joanarcx","html_url":"https://github.com/joanarcx","followers_url":"https://api.github.com/users/joanarcx/followers","following_url":"https://api.github.com/users/joanarcx/following{/other_user}","gists_url":"https://api.github.com/users/joanarcx/gists{/gist_id}","starred_url":"https://api.github.com/users/joanarcx/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/joanarcx/subscriptions","organizations_url":"https://api.github.com/users/joanarcx/orgs","repos_url":"https://api.github.com/users/joanarcx/repos","events_url":"https://api.github.com/users/joanarcx/events{/privacy}","received_events_url":"https://api.github.com/users/joanarcx/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-02-02T15:04:42Z","updated_at":"2018-02-02T16:19:41Z","closed_at":null,"author_association":"NONE","body":"Hey,\r\n\r\nThanks for this nice parser. I have been using it with the new downloadable file from BRENDA and I believe it will be of use to more people now that they made it available. My issue:\r\nExample reaction:\r\n\r\nNSP\t#7# (9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid + tert-butyl\r\n\thydroperoxide = (12Z,15Z)-9,10-epoxyoctadeca-12,15-dienoic aicd +\r\n\t(9Z,12Z)-15,16-epoxy-9,12-octadecadienoic acid + ? <6>\r\n\r\nis parsed as \"-15,16-epoxy-9,12-octadecadienoic acid + ?\" because of the parenthesis in the metabolite names. That part of the reaction starting with the first \"(\" and finishing with the last \")\" is read as a comment.\r\n\r\nCould you maybe help/fix this?\r\n\r\nThanks in advance,\r\n\r\nJ"},"comment":{"url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/comments/362631794","html_url":"https://github.com/Midnighter/BRENDA-Parser/issues/5#issuecomment-362631794","issue_url":"https://api.github.com/repos/Midnighter/BRENDA-Parser/issues/5","id":362631794,"user":{"login":"Midnighter","id":135653,"avatar_url":"https://avatars1.githubusercontent.com/u/135653?v=4","gravatar_id":"","url":"https://api.github.com/users/Midnighter","html_url":"https://github.com/Midnighter","followers_url":"https://api.github.com/users/Midnighter/followers","following_url":"https://api.github.com/users/Midnighter/following{/other_user}","gists_url":"https://api.github.com/users/Midnighter/gists{/gist_id}","starred_url":"https://api.github.com/users/Midnighter/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Midnighter/subscriptions","organizations_url":"https://api.github.com/users/Midnighter/orgs","repos_url":"https://api.github.com/users/Midnighter/repos","events_url":"https://api.github.com/users/Midnighter/events{/privacy}","received_events_url":"https://api.github.com/users/Midnighter/received_events","type":"User","site_admin":false},"created_at":"2018-02-02T16:19:41Z","updated_at":"2018-02-02T16:19:41Z","author_association":"OWNER","body":"Hey, I started working on a complete rewrite of the parser based on @bdelepine's comments."}}
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