{"action":"created","issue":{"url":"https://api.github.com/repos/rrwick/Unicycler/issues/89","repository_url":"https://api.github.com/repos/rrwick/Unicycler","labels_url":"https://api.github.com/repos/rrwick/Unicycler/issues/89/labels{/name}","comments_url":"https://api.github.com/repos/rrwick/Unicycler/issues/89/comments","events_url":"https://api.github.com/repos/rrwick/Unicycler/issues/89/events","html_url":"https://github.com/rrwick/Unicycler/issues/89","id":300211237,"number":89,"title":"problem installing","user":{"login":"martingui","id":36847089,"avatar_url":"https://avatars2.githubusercontent.com/u/36847089?v=4","gravatar_id":"","url":"https://api.github.com/users/martingui","html_url":"https://github.com/martingui","followers_url":"https://api.github.com/users/martingui/followers","following_url":"https://api.github.com/users/martingui/following{/other_user}","gists_url":"https://api.github.com/users/martingui/gists{/gist_id}","starred_url":"https://api.github.com/users/martingui/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/martingui/subscriptions","organizations_url":"https://api.github.com/users/martingui/orgs","repos_url":"https://api.github.com/users/martingui/repos","events_url":"https://api.github.com/users/martingui/events{/privacy}","received_events_url":"https://api.github.com/users/martingui/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-02-26T12:00:52Z","updated_at":"2018-02-26T15:00:01Z","closed_at":null,"author_association":"NONE","body":"Hi,\r\nI have tried installing unicycler in two different ways and neither worked.\r\nI tried the 'build and run without installation' and when checking the dependencies, racon appears as 'bad' even though I used the latest version, I tried entering the path directly with '--racon_path ~/bin/racon/build/bin/racon' but the output is\r\n'Racon was found but does not produce output'\r\n\r\nSo I tried the 'install from source' way.\r\nwhen running 'unicycler' i get the following message:\r\n\r\nTraceback (most recent call last):\r\n  File \"/home/t03mg18/bin/unicyclert/bin/unicycler\", line 6, in <module>\r\n    from pkg_resources import load_entry_point\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 3017, in <module>\r\n    @_call_aside\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 3003, in _call_aside\r\n    f(*args, **kwargs)\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 3030, in _initialize_master_working_set\r\n    working_set = WorkingSet._build_master()\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 659, in _build_master\r\n    ws.require(__requires__)\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 967, in require\r\n    needed = self.resolve(parse_requirements(requirements))\r\n  File \"/usr/local/lib/python3.6/site-packages/pkg_resources/__init__.py\", line 853, in resolve\r\n    raise DistributionNotFound(req, requirers)\r\npkg_resources.DistributionNotFound: The 'unicycler==0.4.4' distribution was not found and is required by the application\r\n\r\nI don't have sudo privileges so I installed in my own folders and not the /usr/bin so maybe that is the problem?\r\nI hope you can help me\r\n\r\nMartin."},"comment":{"url":"https://api.github.com/repos/rrwick/Unicycler/issues/comments/368530605","html_url":"https://github.com/rrwick/Unicycler/issues/89#issuecomment-368530605","issue_url":"https://api.github.com/repos/rrwick/Unicycler/issues/89","id":368530605,"user":{"login":"kapsakcj","id":8172086,"avatar_url":"https://avatars1.githubusercontent.com/u/8172086?v=4","gravatar_id":"","url":"https://api.github.com/users/kapsakcj","html_url":"https://github.com/kapsakcj","followers_url":"https://api.github.com/users/kapsakcj/followers","following_url":"https://api.github.com/users/kapsakcj/following{/other_user}","gists_url":"https://api.github.com/users/kapsakcj/gists{/gist_id}","starred_url":"https://api.github.com/users/kapsakcj/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/kapsakcj/subscriptions","organizations_url":"https://api.github.com/users/kapsakcj/orgs","repos_url":"https://api.github.com/users/kapsakcj/repos","events_url":"https://api.github.com/users/kapsakcj/events{/privacy}","received_events_url":"https://api.github.com/users/kapsakcj/received_events","type":"User","site_admin":false},"created_at":"2018-02-26T15:00:01Z","updated_at":"2018-02-26T15:00:01Z","author_association":"NONE","body":"Somewhat related to your issue (sorry I can't offer a solution for you!) - The new release of Racon (1.0) has caused some problems for me with the Bioconda implementation of Unicycler too. I'm not sure if @rrwick handles the Unicycler Bioconda repository or if others do...but here's what happened to me:\r\n\r\nI installed the latest version of Unicycler via conda\r\n`conda install unicycler racon=0.5`\r\nTested Racon installation with:\r\n`racon --help`\r\n\r\nAnd I got the following error back:\r\n`Illegal instruction (core dumped)`\r\n\r\n[https://twitter.com/CurtisKapsak/status/966812033646759936](https://twitter.com/CurtisKapsak/status/966812033646759936)\r\n\r\nThanks to @druvus 's fix (thank you!), the bioconda route of installing Racon 1.0 works (no error message!), but when I install Racon 0.5 using conda, I get the error message shown above when I run `racon --help`\r\n\r\nCurtis"}}
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