{"action":"created","issue":{"url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/1109","repository_url":"https://api.github.com/repos/opencobra/cobratoolbox","labels_url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/1109/labels{/name}","comments_url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/1109/comments","events_url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/1109/events","html_url":"https://github.com/opencobra/cobratoolbox/pull/1109","id":295594092,"number":1109,"title":"Allows gene merging genes to be optional in createMultipleSpeciesModel","user":{"login":"almut-heinken","id":10808349,"avatar_url":"https://avatars0.githubusercontent.com/u/10808349?v=4","gravatar_id":"","url":"https://api.github.com/users/almut-heinken","html_url":"https://github.com/almut-heinken","followers_url":"https://api.github.com/users/almut-heinken/followers","following_url":"https://api.github.com/users/almut-heinken/following{/other_user}","gists_url":"https://api.github.com/users/almut-heinken/gists{/gist_id}","starred_url":"https://api.github.com/users/almut-heinken/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/almut-heinken/subscriptions","organizations_url":"https://api.github.com/users/almut-heinken/orgs","repos_url":"https://api.github.com/users/almut-heinken/repos","events_url":"https://api.github.com/users/almut-heinken/events{/privacy}","received_events_url":"https://api.github.com/users/almut-heinken/received_events","type":"User","site_admin":false},"labels":[{"id":554296846,"url":"https://api.github.com/repos/opencobra/cobratoolbox/labels/do%20not%20merge","name":"do not merge","color":"b60205","default":false},{"id":490122491,"url":"https://api.github.com/repos/opencobra/cobratoolbox/labels/requires%20changes","name":"requires changes","color":"de2080","default":false}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2018-02-08T17:10:31Z","updated_at":"2018-02-12T11:02:10Z","closed_at":null,"author_association":"CONTRIBUTOR","pull_request":{"url":"https://api.github.com/repos/opencobra/cobratoolbox/pulls/1109","html_url":"https://github.com/opencobra/cobratoolbox/pull/1109","diff_url":"https://github.com/opencobra/cobratoolbox/pull/1109.diff","patch_url":"https://github.com/opencobra/cobratoolbox/pull/1109.patch"},"body":"I changed the function createMultipleSpeciesModel to make the merging of genes optional. It causes the function to take much longer and is usually unnecessary.\r\n\r\n**I hereby confirm that I have:**\r\n\r\n- [X] Tested my code on my own machine\r\n- [X] Followed the guidelines in the [Contributing Guide](https://opencobra.github.io/cobratoolbox/docs/contributing.html)\r\n- [X] Selected `develop` as a target branch (top left drop-down menu)\r\n\r\n*(Note: You may replace [] with [X] to check the box)*\r\n"},"comment":{"url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/comments/364890702","html_url":"https://github.com/opencobra/cobratoolbox/pull/1109#issuecomment-364890702","issue_url":"https://api.github.com/repos/opencobra/cobratoolbox/issues/1109","id":364890702,"user":{"login":"almut-heinken","id":10808349,"avatar_url":"https://avatars0.githubusercontent.com/u/10808349?v=4","gravatar_id":"","url":"https://api.github.com/users/almut-heinken","html_url":"https://github.com/almut-heinken","followers_url":"https://api.github.com/users/almut-heinken/followers","following_url":"https://api.github.com/users/almut-heinken/following{/other_user}","gists_url":"https://api.github.com/users/almut-heinken/gists{/gist_id}","starred_url":"https://api.github.com/users/almut-heinken/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/almut-heinken/subscriptions","organizations_url":"https://api.github.com/users/almut-heinken/orgs","repos_url":"https://api.github.com/users/almut-heinken/repos","events_url":"https://api.github.com/users/almut-heinken/events{/privacy}","received_events_url":"https://api.github.com/users/almut-heinken/received_events","type":"User","site_admin":false},"created_at":"2018-02-12T11:02:10Z","updated_at":"2018-02-12T11:02:10Z","author_association":"CONTRIBUTOR","body":"@laurentheirendt @tpfau  I have opened a new pull request where the gene flag is at the end of the list. Please close this one. Sorry for the inconvenience. I think there shouldn't be problems with other scripts using this function now."}}
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