{"action":"created","issue":{"url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/11","repository_url":"https://api.github.com/repos/hyunhwaj/SalmonTE","labels_url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/11/labels{/name}","comments_url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/11/comments","events_url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/11/events","html_url":"https://github.com/hyunhwaj/SalmonTE/issues/11","id":328166101,"node_id":"MDU6SXNzdWUzMjgxNjYxMDE=","number":11,"title":"UnicodeDecodeError","user":{"login":"wjyzidane","id":34944811,"node_id":"MDQ6VXNlcjM0OTQ0ODEx","avatar_url":"https://avatars0.githubusercontent.com/u/34944811?v=4","gravatar_id":"","url":"https://api.github.com/users/wjyzidane","html_url":"https://github.com/wjyzidane","followers_url":"https://api.github.com/users/wjyzidane/followers","following_url":"https://api.github.com/users/wjyzidane/following{/other_user}","gists_url":"https://api.github.com/users/wjyzidane/gists{/gist_id}","starred_url":"https://api.github.com/users/wjyzidane/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wjyzidane/subscriptions","organizations_url":"https://api.github.com/users/wjyzidane/orgs","repos_url":"https://api.github.com/users/wjyzidane/repos","events_url":"https://api.github.com/users/wjyzidane/events{/privacy}","received_events_url":"https://api.github.com/users/wjyzidane/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":6,"created_at":"2018-05-31T14:38:03Z","updated_at":"2018-05-31T19:57:16Z","closed_at":null,"author_association":"NONE","body":"Hi hyunhwaj,\r\n\r\nPreviously, SalmonTE works fine for me but recently when I run the program, it gives the error as below and any comments?\r\n\r\n~/software/SalmonTE-master/SalmonTE.py quant --reference=m S17_R1_001.fastq.gz S17_R2_001.fastq.gz\r\n\r\n![image](https://user-images.githubusercontent.com/34944811/40788647-8deb4dd6-64be-11e8-92fe-019eb453d670.png)\r\n\r\nJingyi"},"comment":{"url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/comments/393660442","html_url":"https://github.com/hyunhwaj/SalmonTE/issues/11#issuecomment-393660442","issue_url":"https://api.github.com/repos/hyunhwaj/SalmonTE/issues/11","id":393660442,"node_id":"MDEyOklzc3VlQ29tbWVudDM5MzY2MDQ0Mg==","user":{"login":"wjyzidane","id":34944811,"node_id":"MDQ6VXNlcjM0OTQ0ODEx","avatar_url":"https://avatars0.githubusercontent.com/u/34944811?v=4","gravatar_id":"","url":"https://api.github.com/users/wjyzidane","html_url":"https://github.com/wjyzidane","followers_url":"https://api.github.com/users/wjyzidane/followers","following_url":"https://api.github.com/users/wjyzidane/following{/other_user}","gists_url":"https://api.github.com/users/wjyzidane/gists{/gist_id}","starred_url":"https://api.github.com/users/wjyzidane/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wjyzidane/subscriptions","organizations_url":"https://api.github.com/users/wjyzidane/orgs","repos_url":"https://api.github.com/users/wjyzidane/repos","events_url":"https://api.github.com/users/wjyzidane/events{/privacy}","received_events_url":"https://api.github.com/users/wjyzidane/received_events","type":"User","site_admin":false},"created_at":"2018-05-31T19:57:16Z","updated_at":"2018-05-31T19:57:16Z","author_association":"NONE","body":"If I run the pair end unzip file, it gives the error as below, no SalmonTE_output folder generated. I suspect it is because the file name is not correct?\r\n\r\n![image](https://user-images.githubusercontent.com/34944811/40804974-dc0a8280-64ea-11e8-9780-9af8a8e1f3b1.png)\r\n\r\nIf I run the single end unzip file, it gives the error as I reported in the last post. There is SalmonTE folder with a dir called S17_R1_001 generated and files included are shown in the last post.\r\n\r\nLooks like the \"numpy\" script is missing?\r\n\r\n![image](https://user-images.githubusercontent.com/34944811/40805089-385c5a90-64eb-11e8-8ced-87a6187e14b0.png)\r\n\r\n\r\n\r\n"}}
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