{"action":"created","issue":{"url":"https://api.github.com/repos/theislab/scanpy/issues/94","repository_url":"https://api.github.com/repos/theislab/scanpy","labels_url":"https://api.github.com/repos/theislab/scanpy/issues/94/labels{/name}","comments_url":"https://api.github.com/repos/theislab/scanpy/issues/94/comments","events_url":"https://api.github.com/repos/theislab/scanpy/issues/94/events","html_url":"https://github.com/theislab/scanpy/issues/94","id":300866232,"number":94,"title":"\"Compare to a single cluster\" can not work","user":{"login":"AnatoleKing","id":19552392,"avatar_url":"https://avatars1.githubusercontent.com/u/19552392?v=4","gravatar_id":"","url":"https://api.github.com/users/AnatoleKing","html_url":"https://github.com/AnatoleKing","followers_url":"https://api.github.com/users/AnatoleKing/followers","following_url":"https://api.github.com/users/AnatoleKing/following{/other_user}","gists_url":"https://api.github.com/users/AnatoleKing/gists{/gist_id}","starred_url":"https://api.github.com/users/AnatoleKing/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/AnatoleKing/subscriptions","organizations_url":"https://api.github.com/users/AnatoleKing/orgs","repos_url":"https://api.github.com/users/AnatoleKing/repos","events_url":"https://api.github.com/users/AnatoleKing/events{/privacy}","received_events_url":"https://api.github.com/users/AnatoleKing/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":9,"created_at":"2018-02-28T02:20:54Z","updated_at":"2018-03-05T02:30:23Z","closed_at":null,"author_association":"NONE","body":"code:\r\n\r\n```py\r\nsc.tl.rank_genes_groups(adata, 'louvain_groups', groups=['13'], reference= '18' )\r\n\r\nError:\r\nValueError: reference = 18 needs to be one of group_by = [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23]\r\n```\r\n\r\nI think the problem is the code comfuse str(18) and int(18).\r\n\r\ncould you solve it? Thanks"},"comment":{"url":"https://api.github.com/repos/theislab/scanpy/issues/comments/370292754","html_url":"https://github.com/theislab/scanpy/issues/94#issuecomment-370292754","issue_url":"https://api.github.com/repos/theislab/scanpy/issues/94","id":370292754,"user":{"login":"AnatoleKing","id":19552392,"avatar_url":"https://avatars1.githubusercontent.com/u/19552392?v=4","gravatar_id":"","url":"https://api.github.com/users/AnatoleKing","html_url":"https://github.com/AnatoleKing","followers_url":"https://api.github.com/users/AnatoleKing/followers","following_url":"https://api.github.com/users/AnatoleKing/following{/other_user}","gists_url":"https://api.github.com/users/AnatoleKing/gists{/gist_id}","starred_url":"https://api.github.com/users/AnatoleKing/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/AnatoleKing/subscriptions","organizations_url":"https://api.github.com/users/AnatoleKing/orgs","repos_url":"https://api.github.com/users/AnatoleKing/repos","events_url":"https://api.github.com/users/AnatoleKing/events{/privacy}","received_events_url":"https://api.github.com/users/AnatoleKing/received_events","type":"User","site_admin":false},"created_at":"2018-03-05T02:30:23Z","updated_at":"2018-03-05T02:30:23Z","author_association":"NONE","body":"@falexwolf , I used '0.4.2' version, I will update to the latest.\r\nThanks, scanpy is powerful tool for single cell RNASeq data."}}
{"actor":{"display_login":"AnatoleKing"}}