{"action":"opened","issue":{"url":"https://api.github.com/repos/kkdey/Logolas/issues/15","repository_url":"https://api.github.com/repos/kkdey/Logolas","labels_url":"https://api.github.com/repos/kkdey/Logolas/issues/15/labels{/name}","comments_url":"https://api.github.com/repos/kkdey/Logolas/issues/15/comments","events_url":"https://api.github.com/repos/kkdey/Logolas/issues/15/events","html_url":"https://github.com/kkdey/Logolas/issues/15","id":392014994,"node_id":"MDU6SXNzdWUzOTIwMTQ5OTQ=","number":15,"title":"Excessive warnings produced without REBayes installed.","user":{"login":"Neato-Nick","id":5849554,"node_id":"MDQ6VXNlcjU4NDk1NTQ=","avatar_url":"https://avatars2.githubusercontent.com/u/5849554?v=4","gravatar_id":"","url":"https://api.github.com/users/Neato-Nick","html_url":"https://github.com/Neato-Nick","followers_url":"https://api.github.com/users/Neato-Nick/followers","following_url":"https://api.github.com/users/Neato-Nick/following{/other_user}","gists_url":"https://api.github.com/users/Neato-Nick/gists{/gist_id}","starred_url":"https://api.github.com/users/Neato-Nick/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Neato-Nick/subscriptions","organizations_url":"https://api.github.com/users/Neato-Nick/orgs","repos_url":"https://api.github.com/users/Neato-Nick/repos","events_url":"https://api.github.com/users/Neato-Nick/events{/privacy}","received_events_url":"https://api.github.com/users/Neato-Nick/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-12-18T06:31:45Z","updated_at":"2018-12-18T06:31:45Z","closed_at":null,"author_association":"NONE","body":"Hi,\r\n\r\nwhen using this package without REBayes installed, using `type = \"EDLogo\"` produces the warning \"Due to absence of package REBayes, switching to EM algorithm.\" This warning is helpful, but is produced *hundreds* of times upon execution. Is it possible to make this warning only display once after `logomaker` is run? It fills up the console otherwise.\r\n\r\n``` r\r\nlibrary(Logolas)\r\ndata(\"seqlogo_example\")\r\nlogomaker(seqlogo_example, type = \"EDLogo\")\r\n#> using a background with equal probability for all symbols\r\n#> The input is a positional weight matrix\r\n#>                 (entries are probabilities)\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> Due to absence of package REBayes, switching to EM algorithm\r\n#> color_type not provided, so switching to per_row option for\r\n#>             color_type\r\n#> using a background with equal probability for all symbols\r\n#> frame width not provided, taken to be 1\r\n#> frame width not provided, taken to be 1\r\n```\r\n\r\n![](https://i.imgur.com/XD9JaVX.png)\r\n\r\n<sup>Created on 2018-12-17 by the [reprex package](https://reprex.tidyverse.org) (v0.2.1)</sup>\r\n"}}
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