{"action":"created","comment":{"url":"https://api.github.com/repos/KratosMultiphysics/Kratos/pulls/comments/172189426","pull_request_review_id":101162853,"id":172189426,"diff_hunk":"@@ -0,0 +1,187 @@\n+from __future__ import print_function, absolute_import, division  # makes KratosMultiphysics backward compatible with python 2.6 and 2.7\n+\n+import KratosMultiphysics\n+import KratosMultiphysics.KratosUnittest as KratosUnittest\n+\n+import os\n+import math\n+\n+class TestMortarMapperCore(KratosUnittest.TestCase):\n+    def setUp(self):\n+        pass\n+\n+    def __base_test_mapping(self, input_filename, num_nodes, pure_implicit):\n+        self.main_model_part = KratosMultiphysics.ModelPart(\"Structure\")\n+        self.main_model_part.SetBufferSize(2)\n+\n+        ## Creation of the Kratos model (build sub_model_parts or submeshes)\n+        self.StructureModel = {\"Structure\": self.main_model_part}\n+\n+        self.main_model_part.AddNodalSolutionStepVariable(KratosMultiphysics.DISPLACEMENT)\n+        self.main_model_part.AddNodalSolutionStepVariable(KratosMultiphysics.TEMPERATURE)\n+        self.main_model_part.AddNodalSolutionStepVariable(KratosMultiphysics.NORMAL)\n+\n+        self.main_model_part.CloneTimeStep(1.01)\n+\n+        KratosMultiphysics.ModelPartIO(input_filename).ReadModelPart(self.main_model_part)\n+\n+        KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_X,self.main_model_part)\n+        KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Y,self.main_model_part)\n+        KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.DISPLACEMENT_Z,self.main_model_part)\n+        KratosMultiphysics.VariableUtils().AddDof(KratosMultiphysics.TEMPERATURE, self.main_model_part)\n+\n+        self.mapping_model_part = self.main_model_part.GetSubModelPart(\"DISPLACEMENT_Displacement_Auto2\")\n+\n+        self.model_part_slave = self.main_model_part.GetSubModelPart(\"Parts_Parts_Auto1\")\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.SLAVE, True, self.model_part_slave.Conditions)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.MASTER, False, self.model_part_slave.Conditions)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.SLAVE, True, self.model_part_slave.Nodes)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.MASTER, False, self.model_part_slave.Nodes)\n+\n+        self.model_part_master = self.main_model_part.GetSubModelPart(\"Parts_Parts_Auto2\")\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.SLAVE, False, self.model_part_master.Conditions)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.MASTER, True, self.model_part_master.Conditions)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.SLAVE, False, self.model_part_master.Nodes)\n+        KratosMultiphysics.VariableUtils().SetFlag(KratosMultiphysics.MASTER, True, self.model_part_master.Nodes)\n+\n+        for node in self.model_part_master.Nodes:\n+            x = node.X\n+            y = node.Y\n+            z = node.Z\n+            node.SetSolutionStepValue(KratosMultiphysics.TEMPERATURE, z)\n+            node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_X, x)\n+            node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Y, y)\n+            node.SetSolutionStepValue(KratosMultiphysics.DISPLACEMENT_Z, z)\n+        del(node)\n+\n+        map_parameters = KratosMultiphysics.Parameters(\"\"\"\n+        {\n+            \"echo_level\"                       : 0,\n+            \"absolute_convergence_tolerance\"   : 1.0e-9,\n+            \"relative_convergence_tolerance\"   : 1.0e-4,\n+            \"max_number_iterations\"            : 10,\n+            \"integration_order\"                : 2\n+        }\n+        \"\"\")\n+\n+        if (pure_implicit == True):\n+            #linear_solver = ExternalSolversApplication.SuperLUSolver()\n+            linear_solver = KratosMultiphysics.SkylineLUFactorizationSolver()\n+\n+            if (num_nodes == 3):\n+                self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDoubleHistorical(self.main_model_part, KratosMultiphysics.TEMPERATURE, map_parameters, linear_solver)\n+                self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVectorHistorical(self.main_model_part, KratosMultiphysics.DISPLACEMENT, map_parameters, linear_solver)\n+            else:\n+                self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDoubleHistorical(self.main_model_part, KratosMultiphysics.TEMPERATURE, map_parameters, linear_solver)\n+                self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVectorHistorical(self.main_model_part, KratosMultiphysics.DISPLACEMENT, map_parameters, linear_solver)\n+        else:\n+            if (num_nodes == 3):\n+                self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D3NDoubleHistorical(self.main_model_part, KratosMultiphysics.TEMPERATURE, map_parameters)\n+                self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D3NVectorHistorical(self.main_model_part, KratosMultiphysics.DISPLACEMENT, map_parameters)\n+            else:\n+                self.mortar_mapping_double = KratosMultiphysics.SimpleMortarMapperProcess3D4NDoubleHistorical(self.main_model_part, KratosMultiphysics.TEMPERATURE, map_parameters)\n+                self.mortar_mapping_vector = KratosMultiphysics.SimpleMortarMapperProcess3D4NVectorHistorical(self.main_model_part, KratosMultiphysics.DISPLACEMENT, map_parameters)\n+\n+    def _mapper_tests(self, input_filename, num_nodes, pure_implicit = False):\n+\n+        self.__base_test_mapping(input_filename, num_nodes, pure_implicit)\n+\n+        self.mortar_mapping_double.Execute()\n+        self.mortar_mapping_vector.Execute()\n+\n+        ### DEBUG\n+        #self.__post_process()\n+\n+        import from_json_check_result_process\n+\n+        check_parameters = KratosMultiphysics.Parameters(\"\"\"\n+        {\n+            \"check_variables\"      : [\"TEMPERATURE\",\"DISPLACEMENT\"],\n+            \"input_file_name\"      : \"\",\n+            \"model_part_name\"      : \"Structure\",\n+            \"sub_model_part_name\"  : \"Parts_Parts_Auto1\"\n+        }\n+        \"\"\")\n+\n+        check_parameters[\"input_file_name\"].SetString(input_filename+\".json\")\n+\n+        check = from_json_check_result_process.FromJsonCheckResultProcess(self.StructureModel, check_parameters)\n+        check.ExecuteInitialize()\n+        check.ExecuteBeforeSolutionLoop()\n+        check.ExecuteFinalizeSolutionStep()\n+\n+        #import json_output_process\n+\n+        #out_parameters = KratosMultiphysics.Parameters(\"\"\"\n+        #{\n+            #\"output_variables\"     : [\"TEMPERATURE\",\"DISPLACEMENT\"],\n+            #\"output_file_name\"     : \"\",\n+            #\"model_part_name\"      : \"Structure\",\n+            #\"sub_model_part_name\"  : \"Parts_Parts_Auto1\"\n+        #}\n+        #\"\"\")\n+\n+        #out_parameters[\"output_file_name\"].SetString(input_filename+\".json\")\n+\n+        #out = json_output_process.JsonOutputProcess(self.StructureModel, out_parameters)\n+        #out.ExecuteInitialize()\n+        #out.ExecuteBeforeSolutionLoop()\n+        #out.ExecuteFinalizeSolutionStep()\n+\n+    def test_less_basic_mortar_mapping_triangle(self):\n+        input_filename = os.path.dirname(os.path.realpath(__file__)) + \"/mortar_mapper_python_tests/test_integration_several_triangles\"\n+        self._mapper_tests(input_filename, 3, False)\n+\n+    def test_simple_curvature_mortar_mapping_triangle(self):\n+        input_filename = os.path.dirname(os.path.realpath(__file__)) + \"/mortar_mapper_python_tests/test_simple_curvature\"\n+        self._mapper_tests(input_filename, 3, False)\n+\n+    def test_mortar_mapping_triangle(self):\n+        input_filename = os.path.dirname(os.path.realpath(__file__)) + \"/mortar_mapper_python_tests/test_double_curvature_integration_triangle\"\n+        self._mapper_tests(input_filename, 3, False)\n+\n+    def test_mortar_mapping_quad(self):\n+        input_filename = os.path.dirname(os.path.realpath(__file__)) + \"/mortar_mapper_python_tests/test_double_curvature_integration_quadrilateral\"\n+        self._mapper_tests(input_filename, 4, False)\n+\n+    def __post_process(self):\n+        from gid_output_process import GiDOutputProcess\n+        self.gid_output = GiDOutputProcess(self.main_model_part,\n+                                    \"gid_output\",\n+                                    KratosMultiphysics.Parameters(\"\"\"\n+                                        {\n+                                            \"result_file_configuration\" : {\n+                                                \"gidpost_flags\": {\n+                                                    \"GiDPostMode\": \"GiD_PostBinary\",\n+                                                    \"WriteDeformedMeshFlag\": \"WriteUndeformed\",\n+                                                    \"WriteConditionsFlag\": \"WriteElementsOnly\",\n+                                                    \"MultiFileFlag\": \"SingleFile\"\n+                                                },\n+                                                \"nodal_results\"       : [\"DISPLACEMENT\",\"NORMAL\",\"TEMPERATURE\"],\n+                                                \"nodal_nonhistorical_results\": [\"NODAL_AREA\",\"NODAL_MAUX\",\"NODAL_VAUX\"]\n+                                            }\n+                                        }\n+                                        \"\"\")\n+                                    )\n+\n+        self.gid_output.ExecuteInitialize()\n+        self.gid_output.ExecuteBeforeSolutionLoop()\n+        self.gid_output.ExecuteInitializeSolutionStep()\n+        self.gid_output.PrintOutput()\n+        self.gid_output.ExecuteFinalizeSolutionStep()\n+        self.gid_output.ExecuteFinalize()\n+\n+    def __sci_str(self, x):","path":"kratos/tests/test_mortar_mapper.py","position":174,"original_position":174,"commit_id":"59b8ccc3fe3c8eb5072373b9c45cfedbc4a7cc1e","original_commit_id":"b428e30bbab67f3e21ab8a460f8d5aba0a74dd72","user":{"login":"loumalouomega","id":19991680,"avatar_url":"https://avatars2.githubusercontent.com/u/19991680?v=4","gravatar_id":"","url":"https://api.github.com/users/loumalouomega","html_url":"https://github.com/loumalouomega","followers_url":"https://api.github.com/users/loumalouomega/followers","following_url":"https://api.github.com/users/loumalouomega/following{/other_user}","gists_url":"https://api.github.com/users/loumalouomega/gists{/gist_id}","starred_url":"https://api.github.com/users/loumalouomega/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/loumalouomega/subscriptions","organizations_url":"https://api.github.com/users/loumalouomega/orgs","repos_url":"https://api.github.com/users/loumalouomega/repos","events_url":"https://api.github.com/users/loumalouomega/events{/privacy}","received_events_url":"https://api.github.com/users/loumalouomega/received_events","type":"User","site_admin":false},"body":"It forces the scientific notation","created_at":"2018-03-05T13:41:46Z","updated_at":"2018-03-05T13:41:46Z","html_url":"https://github.com/KratosMultiphysics/Kratos/pull/1569#discussion_r172189426","pull_request_url":"https://api.github.com/repos/KratosMultiphysics/Kratos/pulls/1569","author_association":"MEMBER","_links":{"self":{"href":"https://api.github.com/repos/KratosMultiphysics/Kratos/pulls/comments/172189426"},"html":{"href":"https://github.com/KratosMultiphysics/Kratos/pull/1569#discussion_r172189426"},"pull_request":{"href":"https://api.github.com/repos/KratosMultiphysics/Kratos/pulls/1569"}},"in_reply_to_id":171320858},"pull_request":{"url":"https://api.github.com/repos/KratosMultiphysics/Kratos/pulls/1569","id":171234752,"html_url":"https://github.com/KratosMultiphysics/Kratos/pull/1569","diff_url":"https://github.com/KratosMultiphysics/Kratos/pull/1569.diff","patch_url":"https://github.com/KratosMultiphysics/Kratos/pull/1569.patch","issue_url":"https://api.github.com/repos/KratosMultiphysics/Kratos/issues/1569","number":1569,"state":"open","locked":false,"title":"Improving mortar mapper","user":{"login":"loumalouomega","id":19991680,"avatar_url":"https://avatars2.githubusercontent.com/u/19991680?v=4","gravatar_id":"","url":"https://api.github.com/users/loumalouomega","html_url":"https://github.com/loumalouomega","followers_url":"https://api.github.com/users/loumalouomega/followers","following_url":"https://api.github.com/users/loumalouomega/following{/other_user}","gists_url":"https://api.github.com/users/loumalouomega/gists{/gist_id}","starred_url":"https://api.github.com/users/loumalouomega/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/loumalouomega/subscriptions","organizations_url":"https://api.github.com/users/loumalouomega/orgs","repos_url":"https://api.github.com/users/loumalouomega/repos","events_url":"https://api.github.com/users/loumalouomega/events{/privacy}","received_events_url":"https://api.github.com/users/loumalouomega/received_events","type":"User","site_admin":false},"body":"This PR provides functionalities asked by @ddiezrod : \r\n\r\n- Capability of using two separates model parts instead of just one (with master/slave flags)\r\n- Capability of mapping from historical to non historical variable and vice versa\r\n- Internal search on the mapper (instead of depending of an external utility)\r\n\r\nThe PR is not so big, but the mdpa files for the tests are\r\nBesides, many lines are detected as changed, but actually are the same, i don't know why\r\n\r\nPS: @philbucher suggestions to make the interface of mapper more homogeneous?","created_at":"2018-02-25T15:15:21Z","updated_at":"2018-03-05T13:41:46Z","closed_at":null,"merged_at":null,"merge_commit_sha":"95b21c458c1e4c2510fbb5dd576b2c47fcd228f3","assignee":null,"assignees":[],"requested_reviewers":[{"login":"ddiezrod","id":25667299,"avatar_url":"https://avatars1.githubusercontent.com/u/25667299?v=4","gravatar_id":"","url":"https://api.github.com/users/ddiezrod","html_url":"https://github.com/ddiezrod","followers_url":"https://api.github.com/users/ddiezrod/followers","following_url":"https://api.github.com/users/ddiezrod/following{/other_user}","gists_url":"https://api.github.com/users/ddiezrod/gists{/gist_id}","starred_url":"https://api.github.com/users/ddiezrod/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ddiezrod/subscriptions","organizations_url":"https://api.github.com/users/ddiezrod/orgs","repos_url":"https://api.github.com/users/ddiezrod/repos","events_url":"https://api.github.com/users/ddiezrod/events{/privacy}","received_events_url":"https://api.github.com/users/ddiezrod/received_events","type":"User","site_admin":false}],"requested_teams":[],"labels":[{"id":538395921,"url":"https://api.github.com/repos/KratosMultiphysics/Kratos/labels/enhancement","name":"enhancement","color":"84b6eb","default":true},{"id":539268135,"url":"https://api.github.com/repos/KratosMultiphysics/Kratos/labels/kratos%20core","name":"kratos 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