{"action":"created","comment":{"url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/comments/176668754","pull_request_review_id":106410506,"id":176668754,"diff_hunk":"@@ -13,13 +13,13 @@ Recipes are a list of ordered commands and subroutines that has a defined input\n 4. Pipeline\n \n ### Install Recipes\n-Used in `mip_install.pl` to handle installation of programs and references.\n+Used in `Install.pm` to handle installation of programs and references.\n \n ### Build Recipes\n-Used in `mip.pl` to build metadatafiles for references. \n+Used in `mip.pl` to build metadatafiles for references.","path":"documentation/Api.md","position":9,"original_position":9,"commit_id":"d1d28a552d9177118521cb52c77926caab267a77","original_commit_id":"d1d28a552d9177118521cb52c77926caab267a77","user":{"login":"henrikstranneheim","id":584738,"avatar_url":"https://avatars0.githubusercontent.com/u/584738?v=4","gravatar_id":"","url":"https://api.github.com/users/henrikstranneheim","html_url":"https://github.com/henrikstranneheim","followers_url":"https://api.github.com/users/henrikstranneheim/followers","following_url":"https://api.github.com/users/henrikstranneheim/following{/other_user}","gists_url":"https://api.github.com/users/henrikstranneheim/gists{/gist_id}","starred_url":"https://api.github.com/users/henrikstranneheim/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/henrikstranneheim/subscriptions","organizations_url":"https://api.github.com/users/henrikstranneheim/orgs","repos_url":"https://api.github.com/users/henrikstranneheim/repos","events_url":"https://api.github.com/users/henrikstranneheim/events{/privacy}","received_events_url":"https://api.github.com/users/henrikstranneheim/received_events","type":"User","site_admin":false},"body":"mip.pl -> Analyse.pm","created_at":"2018-03-23T08:46:14Z","updated_at":"2018-03-23T08:49:24Z","html_url":"https://github.com/Clinical-Genomics/MIP/pull/440#discussion_r176668754","pull_request_url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440","author_association":"COLLABORATOR","_links":{"self":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/comments/176668754"},"html":{"href":"https://github.com/Clinical-Genomics/MIP/pull/440#discussion_r176668754"},"pull_request":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440"}}},"pull_request":{"url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440","id":176768402,"html_url":"https://github.com/Clinical-Genomics/MIP/pull/440","diff_url":"https://github.com/Clinical-Genomics/MIP/pull/440.diff","patch_url":"https://github.com/Clinical-Genomics/MIP/pull/440.patch","issue_url":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/440","number":440,"state":"open","locked":false,"title":"updated the installation documentation, resolves #430","user":{"login":"jemten","id":3168925,"avatar_url":"https://avatars3.githubusercontent.com/u/3168925?v=4","gravatar_id":"","url":"https://api.github.com/users/jemten","html_url":"https://github.com/jemten","followers_url":"https://api.github.com/users/jemten/followers","following_url":"https://api.github.com/users/jemten/following{/other_user}","gists_url":"https://api.github.com/users/jemten/gists{/gist_id}","starred_url":"https://api.github.com/users/jemten/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jemten/subscriptions","organizations_url":"https://api.github.com/users/jemten/orgs","repos_url":"https://api.github.com/users/jemten/repos","events_url":"https://api.github.com/users/jemten/events{/privacy}","received_events_url":"https://api.github.com/users/jemten/received_events","type":"User","site_admin":false},"body":"","created_at":"2018-03-22T12:53:41Z","updated_at":"2018-03-23T08:49:25Z","closed_at":null,"merged_at":null,"merge_commit_sha":"555ef08f643553ac652d246bd11cc84626e1a4b5","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440/commits","review_comments_url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440/comments","review_comment_url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/comments{/number}","comments_url":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/440/comments","statuses_url":"https://api.github.com/repos/Clinical-Genomics/MIP/statuses/d1d28a552d9177118521cb52c77926caab267a77","head":{"label":"jemten:feature/installation_documentation","ref":"feature/installation_documentation","sha":"d1d28a552d9177118521cb52c77926caab267a77","user":{"login":"jemten","id":3168925,"avatar_url":"https://avatars3.githubusercontent.com/u/3168925?v=4","gravatar_id":"","url":"https://api.github.com/users/jemten","html_url":"https://github.com/jemten","followers_url":"https://api.github.com/users/jemten/followers","following_url":"https://api.github.com/users/jemten/following{/other_user}","gists_url":"https://api.github.com/users/jemten/gists{/gist_id}","starred_url":"https://api.github.com/users/jemten/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jemten/subscriptions","organizations_url":"https://api.github.com/users/jemten/orgs","repos_url":"https://api.github.com/users/jemten/repos","events_url":"https://api.github.com/users/jemten/events{/privacy}","received_events_url":"https://api.github.com/users/jemten/received_events","type":"User","site_admin":false},"repo":{"id":92943276,"name":"MIP","full_name":"jemten/MIP","owner":{"login":"jemten","id":3168925,"avatar_url":"https://avatars3.githubusercontent.com/u/3168925?v=4","gravatar_id":"","url":"https://api.github.com/users/jemten","html_url":"https://github.com/jemten","followers_url":"https://api.github.com/users/jemten/followers","following_url":"https://api.github.com/users/jemten/following{/other_user}","gists_url":"https://api.github.com/users/jemten/gists{/gist_id}","starred_url":"https://api.github.com/users/jemten/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jemten/subscriptions","organizations_url":"https://api.github.com/users/jemten/orgs","repos_url":"https://api.github.com/users/jemten/repos","events_url":"https://api.github.com/users/jemten/events{/privacy}","received_events_url":"https://api.github.com/users/jemten/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/jemten/MIP","description":"Mutation Identification Pipeline. Read the latest documentation:","fork":true,"url":"https://api.github.com/repos/jemten/MIP","forks_url":"https://api.github.com/repos/jemten/MIP/forks","keys_url":"https://api.github.com/repos/jemten/MIP/keys{/key_id}","collaborators_url":"https://api.github.com/repos/jemten/MIP/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/jemten/MIP/teams","hooks_url":"https://api.github.com/repos/jemten/MIP/hooks","issue_events_url":"https://api.github.com/repos/jemten/MIP/issues/events{/number}","events_url":"https://api.github.com/repos/jemten/MIP/events","assignees_url":"https://api.github.com/repos/jemten/MIP/assignees{/user}","branches_url":"https://api.github.com/repos/jemten/MIP/branches{/branch}","tags_url":"https://api.github.com/repos/jemten/MIP/tags","blobs_url":"https://api.github.com/repos/jemten/MIP/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/jemten/MIP/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/jemten/MIP/git/refs{/sha}","trees_url":"https://api.github.com/repos/jemten/MIP/git/trees{/sha}","statuses_url":"https://api.github.com/repos/jemten/MIP/statuses/{sha}","languages_url":"https://api.github.com/repos/jemten/MIP/languages","stargazers_url":"https://api.github.com/repos/jemten/MIP/stargazers","contributors_url":"https://api.github.com/repos/jemten/MIP/contributors","subscribers_url":"https://api.github.com/repos/jemten/MIP/subscribers","subscription_url":"https://api.github.com/repos/jemten/MIP/subscription","commits_url":"https://api.github.com/repos/jemten/MIP/commits{/sha}","git_commits_url":"https://api.github.com/repos/jemten/MIP/git/commits{/sha}","comments_url":"https://api.github.com/repos/jemten/MIP/comments{/number}","issue_comment_url":"https://api.github.com/repos/jemten/MIP/issues/comments{/number}","contents_url":"https://api.github.com/repos/jemten/MIP/contents/{+path}","compare_url":"https://api.github.com/repos/jemten/MIP/compare/{base}...{head}","merges_url":"https://api.github.com/repos/jemten/MIP/merges","archive_url":"https://api.github.com/repos/jemten/MIP/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/jemten/MIP/downloads","issues_url":"https://api.github.com/repos/jemten/MIP/issues{/number}","pulls_url":"https://api.github.com/repos/jemten/MIP/pulls{/number}","milestones_url":"https://api.github.com/repos/jemten/MIP/milestones{/number}","notifications_url":"https://api.github.com/repos/jemten/MIP/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/jemten/MIP/labels{/name}","releases_url":"https://api.github.com/repos/jemten/MIP/releases{/id}","deployments_url":"https://api.github.com/repos/jemten/MIP/deployments","created_at":"2017-05-31T12:18:39Z","updated_at":"2017-05-31T12:18:41Z","pushed_at":"2018-03-22T14:50:13Z","git_url":"git://github.com/jemten/MIP.git","ssh_url":"git@github.com:jemten/MIP.git","clone_url":"https://github.com/jemten/MIP.git","svn_url":"https://github.com/jemten/MIP","homepage":"http://mip-api.readthedocs.org/en/latest/index.html","size":18690,"stargazers_count":0,"watchers_count":0,"language":"Perl","has_issues":false,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":0,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit"},"forks":0,"open_issues":0,"watchers":0,"default_branch":"develop"}},"base":{"label":"Clinical-Genomics:develop","ref":"develop","sha":"3490386ea41d9f030359e5779d30a16155af4ea3","user":{"login":"Clinical-Genomics","id":6412433,"avatar_url":"https://avatars1.githubusercontent.com/u/6412433?v=4","gravatar_id":"","url":"https://api.github.com/users/Clinical-Genomics","html_url":"https://github.com/Clinical-Genomics","followers_url":"https://api.github.com/users/Clinical-Genomics/followers","following_url":"https://api.github.com/users/Clinical-Genomics/following{/other_user}","gists_url":"https://api.github.com/users/Clinical-Genomics/gists{/gist_id}","starred_url":"https://api.github.com/users/Clinical-Genomics/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Clinical-Genomics/subscriptions","organizations_url":"https://api.github.com/users/Clinical-Genomics/orgs","repos_url":"https://api.github.com/users/Clinical-Genomics/repos","events_url":"https://api.github.com/users/Clinical-Genomics/events{/privacy}","received_events_url":"https://api.github.com/users/Clinical-Genomics/received_events","type":"Organization","site_admin":false},"repo":{"id":7667877,"name":"MIP","full_name":"Clinical-Genomics/MIP","owner":{"login":"Clinical-Genomics","id":6412433,"avatar_url":"https://avatars1.githubusercontent.com/u/6412433?v=4","gravatar_id":"","url":"https://api.github.com/users/Clinical-Genomics","html_url":"https://github.com/Clinical-Genomics","followers_url":"https://api.github.com/users/Clinical-Genomics/followers","following_url":"https://api.github.com/users/Clinical-Genomics/following{/other_user}","gists_url":"https://api.github.com/users/Clinical-Genomics/gists{/gist_id}","starred_url":"https://api.github.com/users/Clinical-Genomics/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Clinical-Genomics/subscriptions","organizations_url":"https://api.github.com/users/Clinical-Genomics/orgs","repos_url":"https://api.github.com/users/Clinical-Genomics/repos","events_url":"https://api.github.com/users/Clinical-Genomics/events{/privacy}","received_events_url":"https://api.github.com/users/Clinical-Genomics/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/Clinical-Genomics/MIP","description":"Mutation Identification Pipeline. Read the latest documentation:","fork":false,"url":"https://api.github.com/repos/Clinical-Genomics/MIP","forks_url":"https://api.github.com/repos/Clinical-Genomics/MIP/forks","keys_url":"https://api.github.com/repos/Clinical-Genomics/MIP/keys{/key_id}","collaborators_url":"https://api.github.com/repos/Clinical-Genomics/MIP/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/Clinical-Genomics/MIP/teams","hooks_url":"https://api.github.com/repos/Clinical-Genomics/MIP/hooks","issue_events_url":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/events{/number}","events_url":"https://api.github.com/repos/Clinical-Genomics/MIP/events","assignees_url":"https://api.github.com/repos/Clinical-Genomics/MIP/assignees{/user}","branches_url":"https://api.github.com/repos/Clinical-Genomics/MIP/branches{/branch}","tags_url":"https://api.github.com/repos/Clinical-Genomics/MIP/tags","blobs_url":"https://api.github.com/repos/Clinical-Genomics/MIP/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/Clinical-Genomics/MIP/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/Clinical-Genomics/MIP/git/refs{/sha}","trees_url":"https://api.github.com/repos/Clinical-Genomics/MIP/git/trees{/sha}","statuses_url":"https://api.github.com/repos/Clinical-Genomics/MIP/statuses/{sha}","languages_url":"https://api.github.com/repos/Clinical-Genomics/MIP/languages","stargazers_url":"https://api.github.com/repos/Clinical-Genomics/MIP/stargazers","contributors_url":"https://api.github.com/repos/Clinical-Genomics/MIP/contributors","subscribers_url":"https://api.github.com/repos/Clinical-Genomics/MIP/subscribers","subscription_url":"https://api.github.com/repos/Clinical-Genomics/MIP/subscription","commits_url":"https://api.github.com/repos/Clinical-Genomics/MIP/commits{/sha}","git_commits_url":"https://api.github.com/repos/Clinical-Genomics/MIP/git/commits{/sha}","comments_url":"https://api.github.com/repos/Clinical-Genomics/MIP/comments{/number}","issue_comment_url":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/comments{/number}","contents_url":"https://api.github.com/repos/Clinical-Genomics/MIP/contents/{+path}","compare_url":"https://api.github.com/repos/Clinical-Genomics/MIP/compare/{base}...{head}","merges_url":"https://api.github.com/repos/Clinical-Genomics/MIP/merges","archive_url":"https://api.github.com/repos/Clinical-Genomics/MIP/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/Clinical-Genomics/MIP/downloads","issues_url":"https://api.github.com/repos/Clinical-Genomics/MIP/issues{/number}","pulls_url":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls{/number}","milestones_url":"https://api.github.com/repos/Clinical-Genomics/MIP/milestones{/number}","notifications_url":"https://api.github.com/repos/Clinical-Genomics/MIP/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/Clinical-Genomics/MIP/labels{/name}","releases_url":"https://api.github.com/repos/Clinical-Genomics/MIP/releases{/id}","deployments_url":"https://api.github.com/repos/Clinical-Genomics/MIP/deployments","created_at":"2013-01-17T14:45:55Z","updated_at":"2018-03-19T13:57:49Z","pushed_at":"2018-03-23T08:32:15Z","git_url":"git://github.com/Clinical-Genomics/MIP.git","ssh_url":"git@github.com:Clinical-Genomics/MIP.git","clone_url":"https://github.com/Clinical-Genomics/MIP.git","svn_url":"https://github.com/Clinical-Genomics/MIP","homepage":"http://mip-api.readthedocs.org/en/latest/index.html","size":18690,"stargazers_count":9,"watchers_count":9,"language":"Perl","has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":6,"mirror_url":null,"archived":false,"open_issues_count":31,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit"},"forks":6,"open_issues":31,"watchers":9,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440"},"html":{"href":"https://github.com/Clinical-Genomics/MIP/pull/440"},"issue":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/440"},"comments":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/issues/440/comments"},"review_comments":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440/comments"},"review_comment":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/pulls/440/commits"},"statuses":{"href":"https://api.github.com/repos/Clinical-Genomics/MIP/statuses/d1d28a552d9177118521cb52c77926caab267a77"}},"author_association":"CONTRIBUTOR"}}
{"actor":{"display_login":"henrikstranneheim"}}