{"action":"closed","issue":{"url":"https://api.github.com/repos/lh3/minimap2/issues/137","repository_url":"https://api.github.com/repos/lh3/minimap2","labels_url":"https://api.github.com/repos/lh3/minimap2/issues/137/labels{/name}","comments_url":"https://api.github.com/repos/lh3/minimap2/issues/137/comments","events_url":"https://api.github.com/repos/lh3/minimap2/issues/137/events","html_url":"https://github.com/lh3/minimap2/issues/137","id":307989577,"number":137,"title":"MD FLAG","user":{"login":"tambua81","id":18420162,"avatar_url":"https://avatars3.githubusercontent.com/u/18420162?v=4","gravatar_id":"","url":"https://api.github.com/users/tambua81","html_url":"https://github.com/tambua81","followers_url":"https://api.github.com/users/tambua81/followers","following_url":"https://api.github.com/users/tambua81/following{/other_user}","gists_url":"https://api.github.com/users/tambua81/gists{/gist_id}","starred_url":"https://api.github.com/users/tambua81/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tambua81/subscriptions","organizations_url":"https://api.github.com/users/tambua81/orgs","repos_url":"https://api.github.com/users/tambua81/repos","events_url":"https://api.github.com/users/tambua81/events{/privacy}","received_events_url":"https://api.github.com/users/tambua81/received_events","type":"User","site_admin":false},"labels":[{"id":649711879,"url":"https://api.github.com/repos/lh3/minimap2/labels/duplicate","name":"duplicate","color":"cccccc","default":true},{"id":845569288,"url":"https://api.github.com/repos/lh3/minimap2/labels/feature-request","name":"feature-request","color":"c6ffb2","default":false}],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2018-03-23T11:15:35Z","updated_at":"2018-03-23T14:09:28Z","closed_at":"2018-03-23T14:09:28Z","author_association":"NONE","body":"Hello,\r\nwe have noticed that in minimap2 output there is no MD TAG. We need it for using our pacbio alignment output with pysam module.\r\nIs there possibility to implement this feature in minimap2?\r\nThere is also the possibility to filter out chimeras?\r\n\r\nThanx in advance,\r\nClaudio\r\n"}}
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