{"action":"created","issue":{"url":"https://api.github.com/repos/biosustain/OpenMS/issues/4","repository_url":"https://api.github.com/repos/biosustain/OpenMS","labels_url":"https://api.github.com/repos/biosustain/OpenMS/issues/4/labels{/name}","comments_url":"https://api.github.com/repos/biosustain/OpenMS/issues/4/comments","events_url":"https://api.github.com/repos/biosustain/OpenMS/issues/4/events","html_url":"https://github.com/biosustain/OpenMS/issues/4","id":257627700,"number":4,"title":"SpectrumExtractor::MatchSpectrum","user":{"login":"dmccloskey","id":5378614,"avatar_url":"https://avatars1.githubusercontent.com/u/5378614?v=4","gravatar_id":"","url":"https://api.github.com/users/dmccloskey","html_url":"https://github.com/dmccloskey","followers_url":"https://api.github.com/users/dmccloskey/followers","following_url":"https://api.github.com/users/dmccloskey/following{/other_user}","gists_url":"https://api.github.com/users/dmccloskey/gists{/gist_id}","starred_url":"https://api.github.com/users/dmccloskey/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dmccloskey/subscriptions","organizations_url":"https://api.github.com/users/dmccloskey/orgs","repos_url":"https://api.github.com/users/dmccloskey/repos","events_url":"https://api.github.com/users/dmccloskey/events{/privacy}","received_events_url":"https://api.github.com/users/dmccloskey/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"pasqoo","id":1009863,"avatar_url":"https://avatars2.githubusercontent.com/u/1009863?v=4","gravatar_id":"","url":"https://api.github.com/users/pasqoo","html_url":"https://github.com/pasqoo","followers_url":"https://api.github.com/users/pasqoo/followers","following_url":"https://api.github.com/users/pasqoo/following{/other_user}","gists_url":"https://api.github.com/users/pasqoo/gists{/gist_id}","starred_url":"https://api.github.com/users/pasqoo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pasqoo/subscriptions","organizations_url":"https://api.github.com/users/pasqoo/orgs","repos_url":"https://api.github.com/users/pasqoo/repos","events_url":"https://api.github.com/users/pasqoo/events{/privacy}","received_events_url":"https://api.github.com/users/pasqoo/received_events","type":"User","site_admin":false},"assignees":[{"login":"pasqoo","id":1009863,"avatar_url":"https://avatars2.githubusercontent.com/u/1009863?v=4","gravatar_id":"","url":"https://api.github.com/users/pasqoo","html_url":"https://github.com/pasqoo","followers_url":"https://api.github.com/users/pasqoo/followers","following_url":"https://api.github.com/users/pasqoo/following{/other_user}","gists_url":"https://api.github.com/users/pasqoo/gists{/gist_id}","starred_url":"https://api.github.com/users/pasqoo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pasqoo/subscriptions","organizations_url":"https://api.github.com/users/pasqoo/orgs","repos_url":"https://api.github.com/users/pasqoo/repos","events_url":"https://api.github.com/users/pasqoo/events{/privacy}","received_events_url":"https://api.github.com/users/pasqoo/received_events","type":"User","site_admin":false}],"milestone":null,"comments":4,"created_at":"2017-09-14T07:56:27Z","updated_at":"2018-03-05T12:23:59Z","closed_at":null,"author_association":"NONE","body":"#Objectives\n- [ ] method to match a spectrum to a spectrum database\n- [ ] support for the mzIdentML format to report match\n- [ ] integration with 3rd party databases (e.g., NIST GC-MS database)\n- [ ] test support with example data\n\n#Feature plan\n- What is the format of the DB?\n- What support does OpenMS have for reading the DB format?\n- How can we modify existing classes to get our functionality?\n\nPre-existing OpenMS classes that maybe of help:\n- SpectraSTAdapter\n- SpectralLIbSearch (peptides)\n- MetaboliteSpectralMatcher (compounds)"},"comment":{"url":"https://api.github.com/repos/biosustain/OpenMS/issues/comments/370403325","html_url":"https://github.com/biosustain/OpenMS/issues/4#issuecomment-370403325","issue_url":"https://api.github.com/repos/biosustain/OpenMS/issues/4","id":370403325,"user":{"login":"dmccloskey","id":5378614,"avatar_url":"https://avatars1.githubusercontent.com/u/5378614?v=4","gravatar_id":"","url":"https://api.github.com/users/dmccloskey","html_url":"https://github.com/dmccloskey","followers_url":"https://api.github.com/users/dmccloskey/followers","following_url":"https://api.github.com/users/dmccloskey/following{/other_user}","gists_url":"https://api.github.com/users/dmccloskey/gists{/gist_id}","starred_url":"https://api.github.com/users/dmccloskey/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dmccloskey/subscriptions","organizations_url":"https://api.github.com/users/dmccloskey/orgs","repos_url":"https://api.github.com/users/dmccloskey/repos","events_url":"https://api.github.com/users/dmccloskey/events{/privacy}","received_events_url":"https://api.github.com/users/dmccloskey/received_events","type":"User","site_admin":false},"created_at":"2018-03-05T12:23:59Z","updated_at":"2018-03-05T12:23:59Z","author_association":"NONE","body":"Hi @timosachsenberg, we should have some time to tackle this problem.  Do you mind giving us an overview of what is required to parse the spectral databases?  We can also setup a Skype meeting to go over it if there are too many technical aspects needed to discuss on the comments."}}
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