{"action":"created","issue":{"url":"https://api.github.com/repos/biopython/biopython/issues/232","repository_url":"https://api.github.com/repos/biopython/biopython","labels_url":"https://api.github.com/repos/biopython/biopython/issues/232/labels{/name}","comments_url":"https://api.github.com/repos/biopython/biopython/issues/232/comments","events_url":"https://api.github.com/repos/biopython/biopython/issues/232/events","html_url":"https://github.com/biopython/biopython/issues/232","id":19008839,"node_id":"MDU6SXNzdWUxOTAwODgzOQ==","number":232,"title":"Minimal MEME format support in Bio.motifs.MEME parser","user":{"login":"xguse","id":138931,"node_id":"MDQ6VXNlcjEzODkzMQ==","avatar_url":"https://avatars0.githubusercontent.com/u/138931?v=4","gravatar_id":"","url":"https://api.github.com/users/xguse","html_url":"https://github.com/xguse","followers_url":"https://api.github.com/users/xguse/followers","following_url":"https://api.github.com/users/xguse/following{/other_user}","gists_url":"https://api.github.com/users/xguse/gists{/gist_id}","starred_url":"https://api.github.com/users/xguse/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/xguse/subscriptions","organizations_url":"https://api.github.com/users/xguse/orgs","repos_url":"https://api.github.com/users/xguse/repos","events_url":"https://api.github.com/users/xguse/events{/privacy}","received_events_url":"https://api.github.com/users/xguse/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":25,"created_at":"2013-09-04T23:02:40Z","updated_at":"2018-07-11T19:58:40Z","closed_at":null,"author_association":"NONE","body":"The MEME parser fails to even load X.meme files downloaded FROM MEME.\n\nThe complaint is:\n\n```\nValueError(\"Unexpected end of stream: 'TRAINING SET' not found.\")\n```\n\nLooking at the code, it will fail again even if that worked bc it expects `****` to follow.\n\nit seems the parser only understands the FULL MEME output format, not the minimal format that seems to be what MEME actually stores its motifs in.  This seems a MAJOR oversight.  At the very least it limits the usefulness of the module greatly. \n\nIs there any plan to support the minimal MEME format?  IS it supported?  Am I just being a dunce?  I am good at being a dunce.\n\nAnyway thanks.\n"},"comment":{"url":"https://api.github.com/repos/biopython/biopython/issues/comments/404291612","html_url":"https://github.com/biopython/biopython/issues/232#issuecomment-404291612","issue_url":"https://api.github.com/repos/biopython/biopython/issues/232","id":404291612,"node_id":"MDEyOklzc3VlQ29tbWVudDQwNDI5MTYxMg==","user":{"login":"aralap","id":17768358,"node_id":"MDQ6VXNlcjE3NzY4MzU4","avatar_url":"https://avatars1.githubusercontent.com/u/17768358?v=4","gravatar_id":"","url":"https://api.github.com/users/aralap","html_url":"https://github.com/aralap","followers_url":"https://api.github.com/users/aralap/followers","following_url":"https://api.github.com/users/aralap/following{/other_user}","gists_url":"https://api.github.com/users/aralap/gists{/gist_id}","starred_url":"https://api.github.com/users/aralap/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/aralap/subscriptions","organizations_url":"https://api.github.com/users/aralap/orgs","repos_url":"https://api.github.com/users/aralap/repos","events_url":"https://api.github.com/users/aralap/events{/privacy}","received_events_url":"https://api.github.com/users/aralap/received_events","type":"User","site_admin":false},"created_at":"2018-07-11T19:58:39Z","updated_at":"2018-07-11T19:58:39Z","author_association":"CONTRIBUTOR","body":"Initial commit of code #1734 to make this work, will add test for it soon."}}
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