{"action":"created","issue":{"url":"https://api.github.com/repos/merenlab/anvio/issues/999","repository_url":"https://api.github.com/repos/merenlab/anvio","labels_url":"https://api.github.com/repos/merenlab/anvio/issues/999/labels{/name}","comments_url":"https://api.github.com/repos/merenlab/anvio/issues/999/comments","events_url":"https://api.github.com/repos/merenlab/anvio/issues/999/events","html_url":"https://github.com/merenlab/anvio/issues/999","id":365812875,"node_id":"MDU6SXNzdWUzNjU4MTI4NzU=","number":999,"title":"Anvio functional annotations problems","user":{"login":"pbravakos","id":15817939,"node_id":"MDQ6VXNlcjE1ODE3OTM5","avatar_url":"https://avatars3.githubusercontent.com/u/15817939?v=4","gravatar_id":"","url":"https://api.github.com/users/pbravakos","html_url":"https://github.com/pbravakos","followers_url":"https://api.github.com/users/pbravakos/followers","following_url":"https://api.github.com/users/pbravakos/following{/other_user}","gists_url":"https://api.github.com/users/pbravakos/gists{/gist_id}","starred_url":"https://api.github.com/users/pbravakos/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pbravakos/subscriptions","organizations_url":"https://api.github.com/users/pbravakos/orgs","repos_url":"https://api.github.com/users/pbravakos/repos","events_url":"https://api.github.com/users/pbravakos/events{/privacy}","received_events_url":"https://api.github.com/users/pbravakos/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"meren","id":197307,"node_id":"MDQ6VXNlcjE5NzMwNw==","avatar_url":"https://avatars2.githubusercontent.com/u/197307?v=4","gravatar_id":"","url":"https://api.github.com/users/meren","html_url":"https://github.com/meren","followers_url":"https://api.github.com/users/meren/followers","following_url":"https://api.github.com/users/meren/following{/other_user}","gists_url":"https://api.github.com/users/meren/gists{/gist_id}","starred_url":"https://api.github.com/users/meren/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/meren/subscriptions","organizations_url":"https://api.github.com/users/meren/orgs","repos_url":"https://api.github.com/users/meren/repos","events_url":"https://api.github.com/users/meren/events{/privacy}","received_events_url":"https://api.github.com/users/meren/received_events","type":"User","site_admin":false},"assignees":[{"login":"meren","id":197307,"node_id":"MDQ6VXNlcjE5NzMwNw==","avatar_url":"https://avatars2.githubusercontent.com/u/197307?v=4","gravatar_id":"","url":"https://api.github.com/users/meren","html_url":"https://github.com/meren","followers_url":"https://api.github.com/users/meren/followers","following_url":"https://api.github.com/users/meren/following{/other_user}","gists_url":"https://api.github.com/users/meren/gists{/gist_id}","starred_url":"https://api.github.com/users/meren/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/meren/subscriptions","organizations_url":"https://api.github.com/users/meren/orgs","repos_url":"https://api.github.com/users/meren/repos","events_url":"https://api.github.com/users/meren/events{/privacy}","received_events_url":"https://api.github.com/users/meren/received_events","type":"User","site_admin":false},{"login":"ozcan","id":940884,"node_id":"MDQ6VXNlcjk0MDg4NA==","avatar_url":"https://avatars3.githubusercontent.com/u/940884?v=4","gravatar_id":"","url":"https://api.github.com/users/ozcan","html_url":"https://github.com/ozcan","followers_url":"https://api.github.com/users/ozcan/followers","following_url":"https://api.github.com/users/ozcan/following{/other_user}","gists_url":"https://api.github.com/users/ozcan/gists{/gist_id}","starred_url":"https://api.github.com/users/ozcan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ozcan/subscriptions","organizations_url":"https://api.github.com/users/ozcan/orgs","repos_url":"https://api.github.com/users/ozcan/repos","events_url":"https://api.github.com/users/ozcan/events{/privacy}","received_events_url":"https://api.github.com/users/ozcan/received_events","type":"User","site_admin":false}],"milestone":null,"comments":11,"created_at":"2018-10-02T09:27:16Z","updated_at":"2018-10-16T18:00:06Z","closed_at":null,"author_association":"NONE","body":"PAnvi'o version ...............................: margaret (v5.1)\r\nProfile DB version ...........................: 29\r\nContigs DB version ...........................: 12\r\nPan DB version ...............................: 12\r\nGenome data storage version ..................: 6\r\nAuxiliary data storage version ...............: 2\r\nStructure DB version .........................: 1\r\n\r\nHello, I am using Debian 9 to run anvio commands on a server and Ubuntu 18.04 to run anvi-interactive on a personal computer. \r\nI have followed the metagenomics tutorial workflow and have imported interpro annotations. What i notice is that when i search for a term in search functions i get a different result about the unique gene calls on the terminal and on the anvio running on the browser.  Moreover, in the anvio interface on the browser i get multiple hits of the same result e.g. the same gene caller and the same source with the same accession are repeated multiple times for some of the results, which is confusing. Finally when i import some functions with the anvi-import-functions I notice that the results i get from the \"Show results down bellow\" option and the actual annotations when i inspect the split gene calls are sometimes different.\r\nThanks \r\nPanos"},"comment":{"url":"https://api.github.com/repos/merenlab/anvio/issues/comments/430336936","html_url":"https://github.com/merenlab/anvio/issues/999#issuecomment-430336936","issue_url":"https://api.github.com/repos/merenlab/anvio/issues/999","id":430336936,"node_id":"MDEyOklzc3VlQ29tbWVudDQzMDMzNjkzNg==","user":{"login":"meren","id":197307,"node_id":"MDQ6VXNlcjE5NzMwNw==","avatar_url":"https://avatars2.githubusercontent.com/u/197307?v=4","gravatar_id":"","url":"https://api.github.com/users/meren","html_url":"https://github.com/meren","followers_url":"https://api.github.com/users/meren/followers","following_url":"https://api.github.com/users/meren/following{/other_user}","gists_url":"https://api.github.com/users/meren/gists{/gist_id}","starred_url":"https://api.github.com/users/meren/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/meren/subscriptions","organizations_url":"https://api.github.com/users/meren/orgs","repos_url":"https://api.github.com/users/meren/repos","events_url":"https://api.github.com/users/meren/events{/privacy}","received_events_url":"https://api.github.com/users/meren/received_events","type":"User","site_admin":false},"created_at":"2018-10-16T18:00:06Z","updated_at":"2018-10-16T18:00:06Z","author_association":"MEMBER","body":"The most likely explanation is the presence of multiple amino acid sequences in the source database that align different parts of the gene (i.e., different start-stop positions) yet resolve to the same function name."}}
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