{"action":"created","issue":{"url":"https://api.github.com/repos/I2PC/scipion/issues/1647","repository_url":"https://api.github.com/repos/I2PC/scipion","labels_url":"https://api.github.com/repos/I2PC/scipion/issues/1647/labels{/name}","comments_url":"https://api.github.com/repos/I2PC/scipion/issues/1647/comments","events_url":"https://api.github.com/repos/I2PC/scipion/issues/1647/events","html_url":"https://github.com/I2PC/scipion/issues/1647","id":331111546,"node_id":"MDU6SXNzdWUzMzExMTE1NDY=","number":1647,"title":"Gctf ctf local refinement...feddback","user":{"login":"pconesa","id":785633,"node_id":"MDQ6VXNlcjc4NTYzMw==","avatar_url":"https://avatars2.githubusercontent.com/u/785633?v=4","gravatar_id":"","url":"https://api.github.com/users/pconesa","html_url":"https://github.com/pconesa","followers_url":"https://api.github.com/users/pconesa/followers","following_url":"https://api.github.com/users/pconesa/following{/other_user}","gists_url":"https://api.github.com/users/pconesa/gists{/gist_id}","starred_url":"https://api.github.com/users/pconesa/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pconesa/subscriptions","organizations_url":"https://api.github.com/users/pconesa/orgs","repos_url":"https://api.github.com/users/pconesa/repos","events_url":"https://api.github.com/users/pconesa/events{/privacy}","received_events_url":"https://api.github.com/users/pconesa/received_events","type":"User","site_admin":false},"labels":[{"id":208654810,"node_id":"MDU6TGFiZWwyMDg2NTQ4MTA=","url":"https://api.github.com/repos/I2PC/scipion/labels/bug","name":"bug","color":"fc2929","default":true}],"state":"closed","locked":false,"assignee":{"login":"azazellochg","id":6952870,"node_id":"MDQ6VXNlcjY5NTI4NzA=","avatar_url":"https://avatars3.githubusercontent.com/u/6952870?v=4","gravatar_id":"","url":"https://api.github.com/users/azazellochg","html_url":"https://github.com/azazellochg","followers_url":"https://api.github.com/users/azazellochg/followers","following_url":"https://api.github.com/users/azazellochg/following{/other_user}","gists_url":"https://api.github.com/users/azazellochg/gists{/gist_id}","starred_url":"https://api.github.com/users/azazellochg/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/azazellochg/subscriptions","organizations_url":"https://api.github.com/users/azazellochg/orgs","repos_url":"https://api.github.com/users/azazellochg/repos","events_url":"https://api.github.com/users/azazellochg/events{/privacy}","received_events_url":"https://api.github.com/users/azazellochg/received_events","type":"User","site_admin":false},"assignees":[{"login":"azazellochg","id":6952870,"node_id":"MDQ6VXNlcjY5NTI4NzA=","avatar_url":"https://avatars3.githubusercontent.com/u/6952870?v=4","gravatar_id":"","url":"https://api.github.com/users/azazellochg","html_url":"https://github.com/azazellochg","followers_url":"https://api.github.com/users/azazellochg/followers","following_url":"https://api.github.com/users/azazellochg/following{/other_user}","gists_url":"https://api.github.com/users/azazellochg/gists{/gist_id}","starred_url":"https://api.github.com/users/azazellochg/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/azazellochg/subscriptions","organizations_url":"https://api.github.com/users/azazellochg/orgs","repos_url":"https://api.github.com/users/azazellochg/repos","events_url":"https://api.github.com/users/azazellochg/events{/privacy}","received_events_url":"https://api.github.com/users/azazellochg/received_events","type":"User","site_admin":false}],"milestone":{"url":"https://api.github.com/repos/I2PC/scipion/milestones/7","html_url":"https://github.com/I2PC/scipion/milestone/7","labels_url":"https://api.github.com/repos/I2PC/scipion/milestones/7/labels","id":3244958,"node_id":"MDk6TWlsZXN0b25lMzI0NDk1OA==","number":7,"title":"v1.2.1","description":"To address bug found in v1.2 and other features that will impact performance, specially for streaming processing in facilities.","creator":{"login":"pconesa","id":785633,"node_id":"MDQ6VXNlcjc4NTYzMw==","avatar_url":"https://avatars2.githubusercontent.com/u/785633?v=4","gravatar_id":"","url":"https://api.github.com/users/pconesa","html_url":"https://github.com/pconesa","followers_url":"https://api.github.com/users/pconesa/followers","following_url":"https://api.github.com/users/pconesa/following{/other_user}","gists_url":"https://api.github.com/users/pconesa/gists{/gist_id}","starred_url":"https://api.github.com/users/pconesa/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pconesa/subscriptions","organizations_url":"https://api.github.com/users/pconesa/orgs","repos_url":"https://api.github.com/users/pconesa/repos","events_url":"https://api.github.com/users/pconesa/events{/privacy}","received_events_url":"https://api.github.com/users/pconesa/received_events","type":"User","site_admin":false},"open_issues":1,"closed_issues":13,"state":"open","created_at":"2018-04-05T12:25:03Z","updated_at":"2018-06-12T08:00:04Z","due_on":"2018-06-27T07:00:00Z","closed_at":null},"comments":1,"created_at":"2018-06-11T09:29:35Z","updated_at":"2018-06-12T08:00:04Z","closed_at":"2018-06-12T08:00:04Z","author_association":"MEMBER","body":"One of our user here has used it. After 8 day it has failed in step 2nd which can't be resumed.\r\nFirstime it died without info in the log, second....fails because a mic is not found....She was warned that se was using a non released code and that she was somehow \"betatesting\" this.\r\n\r\nRuns/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic.mrc` > Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/ctfEstimation.txt--do_validation 0 Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic.mrc > Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/ctfEstimation.txt--do_validation 0 Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic.mrc > Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/ctfEstimation.txt\r\n00032:   2018-06-09 04:10:55,476 ERROR:  Protocol failed: [Errno 2] No such file or directory: 'Runs/011216_ProtGctfRefine/tmp/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic/GridSquare_9629623_Data_FoilHole_9633779_Data_9633547_9633548_20180410_1735-1901_aligned_mic.ctf'\r\n\r\n\r\nAnd after this she tried to continue and got this:\r\n0049:   2018-06-11 09:17:21,234 INFO:  STARTED: refineCtfStep, step 2\r\n00050:   2018-06-11 09:17:21,234 INFO:    2018-06-11 09:17:21.234008\r\n00051:   2018-06-11 09:17:21,287 ERROR:  Protocol failed: 'ProtGctfRefine' object has no attribute 'downFactor'"},"comment":{"url":"https://api.github.com/repos/I2PC/scipion/issues/comments/396501578","html_url":"https://github.com/I2PC/scipion/issues/1647#issuecomment-396501578","issue_url":"https://api.github.com/repos/I2PC/scipion/issues/1647","id":396501578,"node_id":"MDEyOklzc3VlQ29tbWVudDM5NjUwMTU3OA==","user":{"login":"pconesa","id":785633,"node_id":"MDQ6VXNlcjc4NTYzMw==","avatar_url":"https://avatars2.githubusercontent.com/u/785633?v=4","gravatar_id":"","url":"https://api.github.com/users/pconesa","html_url":"https://github.com/pconesa","followers_url":"https://api.github.com/users/pconesa/followers","following_url":"https://api.github.com/users/pconesa/following{/other_user}","gists_url":"https://api.github.com/users/pconesa/gists{/gist_id}","starred_url":"https://api.github.com/users/pconesa/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pconesa/subscriptions","organizations_url":"https://api.github.com/users/pconesa/orgs","repos_url":"https://api.github.com/users/pconesa/repos","events_url":"https://api.github.com/users/pconesa/events{/privacy}","received_events_url":"https://api.github.com/users/pconesa/received_events","type":"User","site_admin":false},"created_at":"2018-06-12T08:00:03Z","updated_at":"2018-06-12T08:00:03Z","author_association":"MEMBER","body":"Then I close this one."}}
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