{"action":"created","issue":{"url":"https://api.github.com/repos/pints-team/pints/issues/562","repository_url":"https://api.github.com/repos/pints-team/pints","labels_url":"https://api.github.com/repos/pints-team/pints/issues/562/labels{/name}","comments_url":"https://api.github.com/repos/pints-team/pints/issues/562/comments","events_url":"https://api.github.com/repos/pints-team/pints/issues/562/events","html_url":"https://github.com/pints-team/pints/issues/562","id":380686138,"node_id":"MDU6SXNzdWUzODA2ODYxMzg=","number":562,"title":"Should we func. test MCMC methods with the logistic model too?","user":{"login":"MichaelClerx","id":517644,"node_id":"MDQ6VXNlcjUxNzY0NA==","avatar_url":"https://avatars1.githubusercontent.com/u/517644?v=4","gravatar_id":"","url":"https://api.github.com/users/MichaelClerx","html_url":"https://github.com/MichaelClerx","followers_url":"https://api.github.com/users/MichaelClerx/followers","following_url":"https://api.github.com/users/MichaelClerx/following{/other_user}","gists_url":"https://api.github.com/users/MichaelClerx/gists{/gist_id}","starred_url":"https://api.github.com/users/MichaelClerx/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/MichaelClerx/subscriptions","organizations_url":"https://api.github.com/users/MichaelClerx/orgs","repos_url":"https://api.github.com/users/MichaelClerx/repos","events_url":"https://api.github.com/users/MichaelClerx/events{/privacy}","received_events_url":"https://api.github.com/users/MichaelClerx/received_events","type":"User","site_admin":false},"labels":[{"id":1002266302,"node_id":"MDU6TGFiZWwxMDAyMjY2MzAy","url":"https://api.github.com/repos/pints-team/pints/labels/functional-testing","name":"functional-testing","color":"b60205","default":false}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-11-14T12:57:34Z","updated_at":"2018-11-14T15:41:36Z","closed_at":null,"author_association":"MEMBER","body":"We can't say much about the distribution, but they should be able to get a good MAP prediction of the true parameters, when started near the ~true~ best parameters?\r\n\r\nSee e.g. https://github.com/pints-team/pints/blob/master/examples/sampling-hamiltoniam-mcmc.ipynb which doesn't\r\n\r\n@ben18785 @martinjrobins ?\r\n\r\n\r\n*best params being those found by a reliable optimiser, so including noise bias"},"comment":{"url":"https://api.github.com/repos/pints-team/pints/issues/comments/438707509","html_url":"https://github.com/pints-team/pints/issues/562#issuecomment-438707509","issue_url":"https://api.github.com/repos/pints-team/pints/issues/562","id":438707509,"node_id":"MDEyOklzc3VlQ29tbWVudDQzODcwNzUwOQ==","user":{"login":"ben18785","id":4490664,"node_id":"MDQ6VXNlcjQ0OTA2NjQ=","avatar_url":"https://avatars3.githubusercontent.com/u/4490664?v=4","gravatar_id":"","url":"https://api.github.com/users/ben18785","html_url":"https://github.com/ben18785","followers_url":"https://api.github.com/users/ben18785/followers","following_url":"https://api.github.com/users/ben18785/following{/other_user}","gists_url":"https://api.github.com/users/ben18785/gists{/gist_id}","starred_url":"https://api.github.com/users/ben18785/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ben18785/subscriptions","organizations_url":"https://api.github.com/users/ben18785/orgs","repos_url":"https://api.github.com/users/ben18785/repos","events_url":"https://api.github.com/users/ben18785/events{/privacy}","received_events_url":"https://api.github.com/users/ben18785/received_events","type":"User","site_admin":false},"created_at":"2018-11-14T15:41:36Z","updated_at":"2018-11-14T15:41:36Z","author_association":"CONTRIBUTOR","body":"Strange that HMC fails this. I don't think it should...\n\nOn Wed, Nov 14, 2018 at 3:39 PM Martin Robinson <notifications@github.com>\nwrote:\n\n> So the HMC would fail this proposed test? Does that mean it is incorrectly\n> implemented, or just bad in a performance sense?\n>\n> —\n> You are receiving this because you were mentioned.\n> Reply to this email directly, view it on GitHub\n> <https://github.com/pints-team/pints/issues/562#issuecomment-438706652>,\n> or mute the thread\n> <https://github.com/notifications/unsubscribe-auth/AESFqEB_6rI9thQLTny7MmXN9g5n3dZtks5uvDkrgaJpZM4YdsE2>\n> .\n>\n"}}
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