{"action":"created","issue":{"url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/13","repository_url":"https://api.github.com/repos/BFL-lab/Mfannot","labels_url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/13/labels{/name}","comments_url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/13/comments","events_url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/13/events","html_url":"https://github.com/BFL-lab/Mfannot/issues/13","id":361988900,"node_id":"MDU6SXNzdWUzNjE5ODg5MDA=","number":13,"title":"HMMsearch issue","user":{"login":"natacha-beck","id":777590,"node_id":"MDQ6VXNlcjc3NzU5MA==","avatar_url":"https://avatars1.githubusercontent.com/u/777590?v=4","gravatar_id":"","url":"https://api.github.com/users/natacha-beck","html_url":"https://github.com/natacha-beck","followers_url":"https://api.github.com/users/natacha-beck/followers","following_url":"https://api.github.com/users/natacha-beck/following{/other_user}","gists_url":"https://api.github.com/users/natacha-beck/gists{/gist_id}","starred_url":"https://api.github.com/users/natacha-beck/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/natacha-beck/subscriptions","organizations_url":"https://api.github.com/users/natacha-beck/orgs","repos_url":"https://api.github.com/users/natacha-beck/repos","events_url":"https://api.github.com/users/natacha-beck/events{/privacy}","received_events_url":"https://api.github.com/users/natacha-beck/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-09-20T01:55:31Z","updated_at":"2018-09-20T01:59:33Z","closed_at":null,"author_association":"COLLABORATOR","body":"Here is the message from  @JFWolters, reference in #6: \r\n\r\n> I am still getting an error message related to HMMsearch:\r\n> \"Error in execution of HMMsearch in RunHMMSearchForLowConservedGenes subroutine\"\r\n> \r\n> Unfortunatley I don't see where this issue is stemming from as both the executables HMMsearchCombiner and HMMsearchWrapper are in my PATH, as well as all the executables from HMMER.\r\n> \r\n> I have included another test run using the version of mfannot linked in your most recent reply, which I saved as mfannot_test_091918.\r\n> \r\n> This run was done using the command:\r\n> mfannot_test_091918 --d --T ~/packages/Mfannot-master/examples/mfannot_test_09192018 allomyces.fna >& mfannot_log"},"comment":{"url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/comments/423014667","html_url":"https://github.com/BFL-lab/Mfannot/issues/13#issuecomment-423014667","issue_url":"https://api.github.com/repos/BFL-lab/Mfannot/issues/13","id":423014667,"node_id":"MDEyOklzc3VlQ29tbWVudDQyMzAxNDY2Nw==","user":{"login":"natacha-beck","id":777590,"node_id":"MDQ6VXNlcjc3NzU5MA==","avatar_url":"https://avatars1.githubusercontent.com/u/777590?v=4","gravatar_id":"","url":"https://api.github.com/users/natacha-beck","html_url":"https://github.com/natacha-beck","followers_url":"https://api.github.com/users/natacha-beck/followers","following_url":"https://api.github.com/users/natacha-beck/following{/other_user}","gists_url":"https://api.github.com/users/natacha-beck/gists{/gist_id}","starred_url":"https://api.github.com/users/natacha-beck/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/natacha-beck/subscriptions","organizations_url":"https://api.github.com/users/natacha-beck/orgs","repos_url":"https://api.github.com/users/natacha-beck/repos","events_url":"https://api.github.com/users/natacha-beck/events{/privacy}","received_events_url":"https://api.github.com/users/natacha-beck/received_events","type":"User","site_admin":false},"created_at":"2018-09-20T01:59:33Z","updated_at":"2018-09-20T01:59:33Z","author_association":"COLLABORATOR","body":"@JFWolters: Can you please provide me the temporary directory to take a look. "}}
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