{"action":"created","issue":{"url":"https://api.github.com/repos/satijalab/seurat/issues/371","repository_url":"https://api.github.com/repos/satijalab/seurat","labels_url":"https://api.github.com/repos/satijalab/seurat/issues/371/labels{/name}","comments_url":"https://api.github.com/repos/satijalab/seurat/issues/371/comments","events_url":"https://api.github.com/repos/satijalab/seurat/issues/371/events","html_url":"https://github.com/satijalab/seurat/issues/371","id":306502107,"number":371,"title":"Count number of cells expressing a gene","user":{"login":"nicodemus88","id":24598265,"avatar_url":"https://avatars3.githubusercontent.com/u/24598265?v=4","gravatar_id":"","url":"https://api.github.com/users/nicodemus88","html_url":"https://github.com/nicodemus88","followers_url":"https://api.github.com/users/nicodemus88/followers","following_url":"https://api.github.com/users/nicodemus88/following{/other_user}","gists_url":"https://api.github.com/users/nicodemus88/gists{/gist_id}","starred_url":"https://api.github.com/users/nicodemus88/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nicodemus88/subscriptions","organizations_url":"https://api.github.com/users/nicodemus88/orgs","repos_url":"https://api.github.com/users/nicodemus88/repos","events_url":"https://api.github.com/users/nicodemus88/events{/privacy}","received_events_url":"https://api.github.com/users/nicodemus88/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2018-03-19T15:06:01Z","updated_at":"2018-03-21T10:16:17Z","closed_at":"2018-03-21T00:10:28Z","author_association":"NONE","body":"Hi Seurat team,\r\n\r\nI was wondering if you could show me how can I calculate the number of cells expressing the given genes. \r\n\r\nFor example, I have the violin plot for 3 different genes below. I wanted to add the information of the number of cells expressing those genes for each cluster.\r\n \r\nhttps://imgur.com/a/WzMjq\r\n\r\nHow can I do that? Are there any function in seurat which can do this?\r\n\r\nThank you very much."},"comment":{"url":"https://api.github.com/repos/satijalab/seurat/issues/comments/374889177","html_url":"https://github.com/satijalab/seurat/issues/371#issuecomment-374889177","issue_url":"https://api.github.com/repos/satijalab/seurat/issues/371","id":374889177,"user":{"login":"nicodemus88","id":24598265,"avatar_url":"https://avatars3.githubusercontent.com/u/24598265?v=4","gravatar_id":"","url":"https://api.github.com/users/nicodemus88","html_url":"https://github.com/nicodemus88","followers_url":"https://api.github.com/users/nicodemus88/followers","following_url":"https://api.github.com/users/nicodemus88/following{/other_user}","gists_url":"https://api.github.com/users/nicodemus88/gists{/gist_id}","starred_url":"https://api.github.com/users/nicodemus88/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nicodemus88/subscriptions","organizations_url":"https://api.github.com/users/nicodemus88/orgs","repos_url":"https://api.github.com/users/nicodemus88/repos","events_url":"https://api.github.com/users/nicodemus88/events{/privacy}","received_events_url":"https://api.github.com/users/nicodemus88/received_events","type":"User","site_admin":false},"created_at":"2018-03-21T10:16:17Z","updated_at":"2018-03-21T10:16:17Z","author_association":"NONE","body":"I see.\r\nYes, I am doing that but to count them by clusters it's quite the hassle.\r\nThat's fine then, I will stick to my current method.\r\nThank you for your reply. "}}
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