{"action":"opened","issue":{"url":"https://api.github.com/repos/jmtyszka/atlaskit/issues/1","repository_url":"https://api.github.com/repos/jmtyszka/atlaskit","labels_url":"https://api.github.com/repos/jmtyszka/atlaskit/issues/1/labels{/name}","comments_url":"https://api.github.com/repos/jmtyszka/atlaskit/issues/1/comments","events_url":"https://api.github.com/repos/jmtyszka/atlaskit/issues/1/events","html_url":"https://github.com/jmtyszka/atlaskit/issues/1","id":316333390,"number":1,"title":"enhancements to tmp2ind_T1T2.sh (and tmp2ind_T1.sh)","user":{"login":"jcrdubois","id":5529616,"avatar_url":"https://avatars3.githubusercontent.com/u/5529616?v=4","gravatar_id":"","url":"https://api.github.com/users/jcrdubois","html_url":"https://github.com/jcrdubois","followers_url":"https://api.github.com/users/jcrdubois/followers","following_url":"https://api.github.com/users/jcrdubois/following{/other_user}","gists_url":"https://api.github.com/users/jcrdubois/gists{/gist_id}","starred_url":"https://api.github.com/users/jcrdubois/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jcrdubois/subscriptions","organizations_url":"https://api.github.com/users/jcrdubois/orgs","repos_url":"https://api.github.com/users/jcrdubois/repos","events_url":"https://api.github.com/users/jcrdubois/events{/privacy}","received_events_url":"https://api.github.com/users/jcrdubois/received_events","type":"User","site_admin":false},"labels":[{"id":196821906,"url":"https://api.github.com/repos/jmtyszka/atlaskit/labels/enhancement","name":"enhancement","color":"84b6eb","default":true}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-04-20T16:28:51Z","updated_at":"2018-04-20T16:28:51Z","closed_at":null,"author_association":"COLLABORATOR","body":"A few suggestions:\r\n- add an input argument for nthreads\r\n- if probability atlas is 4d, then WarpImageMultiTransform is not appropriate; you need to use WarpTimeSeriesImageMultiTransform (currently only the first volume of the probability atlas gets transformed)\r\n- make input probability atlas optional; it can be transformed at a later step using the learned affine & warp\r\n\r\nHappy to make & push these edits if you agree.\r\n"}}
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