{"action":"created","issue":{"url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/9087","repository_url":"https://api.github.com/repos/ContinuumIO/anaconda-issues","labels_url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/9087/labels{/name}","comments_url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/9087/comments","events_url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/9087/events","html_url":"https://github.com/ContinuumIO/anaconda-issues/issues/9087","id":310987672,"node_id":"MDU6SXNzdWUzMTA5ODc2NzI=","number":9087,"title":"Navigator does not update packages","user":{"login":"yazabaza","id":351870,"node_id":"MDQ6VXNlcjM1MTg3MA==","avatar_url":"https://avatars2.githubusercontent.com/u/351870?v=4","gravatar_id":"","url":"https://api.github.com/users/yazabaza","html_url":"https://github.com/yazabaza","followers_url":"https://api.github.com/users/yazabaza/followers","following_url":"https://api.github.com/users/yazabaza/following{/other_user}","gists_url":"https://api.github.com/users/yazabaza/gists{/gist_id}","starred_url":"https://api.github.com/users/yazabaza/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yazabaza/subscriptions","organizations_url":"https://api.github.com/users/yazabaza/orgs","repos_url":"https://api.github.com/users/yazabaza/repos","events_url":"https://api.github.com/users/yazabaza/events{/privacy}","received_events_url":"https://api.github.com/users/yazabaza/received_events","type":"User","site_admin":false},"labels":[{"id":507370569,"node_id":"MDU6TGFiZWw1MDczNzA1Njk=","url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/labels/pending-release","name":"pending-release","color":"d4c5f9","default":false},{"id":355353255,"node_id":"MDU6TGFiZWwzNTUzNTMyNTU=","url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/labels/pkg-navigator","name":"pkg-navigator","color":"fbca04","default":false},{"id":121978342,"node_id":"MDU6TGFiZWwxMjE5NzgzNDI=","url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/labels/reso-completed","name":"reso-completed","color":"1d76db","default":false}],"state":"closed","locked":false,"assignee":{"login":"goanpeca","id":3627835,"node_id":"MDQ6VXNlcjM2Mjc4MzU=","avatar_url":"https://avatars3.githubusercontent.com/u/3627835?v=4","gravatar_id":"","url":"https://api.github.com/users/goanpeca","html_url":"https://github.com/goanpeca","followers_url":"https://api.github.com/users/goanpeca/followers","following_url":"https://api.github.com/users/goanpeca/following{/other_user}","gists_url":"https://api.github.com/users/goanpeca/gists{/gist_id}","starred_url":"https://api.github.com/users/goanpeca/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/goanpeca/subscriptions","organizations_url":"https://api.github.com/users/goanpeca/orgs","repos_url":"https://api.github.com/users/goanpeca/repos","events_url":"https://api.github.com/users/goanpeca/events{/privacy}","received_events_url":"https://api.github.com/users/goanpeca/received_events","type":"User","site_admin":false},"assignees":[{"login":"goanpeca","id":3627835,"node_id":"MDQ6VXNlcjM2Mjc4MzU=","avatar_url":"https://avatars3.githubusercontent.com/u/3627835?v=4","gravatar_id":"","url":"https://api.github.com/users/goanpeca","html_url":"https://github.com/goanpeca","followers_url":"https://api.github.com/users/goanpeca/followers","following_url":"https://api.github.com/users/goanpeca/following{/other_user}","gists_url":"https://api.github.com/users/goanpeca/gists{/gist_id}","starred_url":"https://api.github.com/users/goanpeca/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/goanpeca/subscriptions","organizations_url":"https://api.github.com/users/goanpeca/orgs","repos_url":"https://api.github.com/users/goanpeca/repos","events_url":"https://api.github.com/users/goanpeca/events{/privacy}","received_events_url":"https://api.github.com/users/goanpeca/received_events","type":"User","site_admin":false}],"milestone":null,"comments":16,"created_at":"2018-04-03T20:32:02Z","updated_at":"2018-09-18T11:57:45Z","closed_at":"2018-05-30T20:58:58Z","author_association":"NONE","body":"In Navigator, Environments > select environment, select \"Updatable\", right-click packages > \"Mark for Update\", click \"Apply\". See \"The following packages will be modified\", click \"Apply\". --> Nothing happens! After doing this about 10 times it seems that some of the packages updated behind the scenes, but not all. Update Index does not help. Restart Navigator does not help.\r\n\r\n##### Anaconda or Miniconda version:\r\nAnaconda Navigator 1.82\r\n##### Operating System:\r\nMacOS 10.13.3\r\n##### `conda info`\r\n```\r\n     active environment : None\r\n       user config file : /Users/r/.condarc\r\n populated config files : /Users/r/.condarc\r\n          conda version : 4.4.4\r\n    conda-build version : 3.0.27\r\n         python version : 3.6.3.final.0\r\n       base environment : /Users/r/anaconda3  (writable)\r\n           channel URLs : https://repo.continuum.io/pkgs/main/osx-64\r\n                          https://repo.continuum.io/pkgs/main/noarch\r\n                          https://repo.continuum.io/pkgs/free/osx-64\r\n                          https://repo.continuum.io/pkgs/free/noarch\r\n                          https://repo.continuum.io/pkgs/r/osx-64\r\n                          https://repo.continuum.io/pkgs/r/noarch\r\n                          https://repo.continuum.io/pkgs/pro/osx-64\r\n                          https://repo.continuum.io/pkgs/pro/noarch\r\n          package cache : /Users/r/anaconda3/pkgs\r\n                          /Users/r/.conda/pkgs\r\n       envs directories : /Users/r/anaconda3/envs\r\n                          /Users/r/.conda/envs\r\n               platform : osx-64\r\n             user-agent : conda/4.4.4 requests/2.18.4 CPython/3.6.3 Darwin/17.4.0 OSX/10.13.3\r\n                UID:GID : 502:20\r\n             netrc file : /Users/r/.netrc\r\n           offline mode : False\r\n\r\n```\r\n\r\n##### `conda list --show-channel-urls`\r\n```\r\n# packages in environment at /Users/r/anaconda3:\r\n#\r\n_ipyw_jlab_nb_ext_conf    0.1.0            py36h2fc01ae_0    defaults\r\nalabaster                 0.7.10           py36h174008c_0    defaults\r\nanaconda                  custom           py36ha4fed55_0    defaults\r\nanaconda-client           1.6.12                   py36_0    defaults\r\nanaconda-navigator        1.8.2                    py36_0    defaults\r\nanaconda-project          0.8.0            py36h99320b2_0    defaults\r\nappnope                   0.1.0            py36hf537a9a_0    defaults\r\nappscript                 1.0.1            py36h9e71e49_1    defaults\r\nasn1crypto                0.22.0           py36hb705621_1    defaults\r\nastroid                   1.5.3            py36h1333018_0    defaults\r\nastropy                   2.0.2            py36hf79c81d_4    defaults\r\nbabel                     2.5.0            py36h9f161ff_0    defaults\r\nbackports                 1.0              py36ha3c1827_1    defaults\r\nbackports.shutil_get_terminal_size 1.0.0            py36hd7a2ee4_2    defaults\r\nbeautifulsoup4            4.6.0            py36h72d3c9f_1    defaults\r\nbitarray                  0.8.1            py36h20fa61d_0    defaults\r\nbkcharts                  0.2              py36h073222e_0    defaults\r\nblaze                     0.11.3           py36h02e7a37_0    defaults\r\nbleach                    2.0.0            py36h8fcea71_0    defaults\r\nbokeh                     0.12.10          py36hfd5be35_0    defaults\r\nboto                      2.48.0           py36hdbc59ac_1    defaults\r\nbottleneck                1.2.1            py36hbd380ad_0    defaults\r\nbzip2                     1.0.6                h92991f9_1    defaults\r\nca-certificates           2018.03.07                    0    defaults\r\ncertifi                   2018.1.18                py36_0    defaults\r\ncffi                      1.10.0           py36h880867e_1    defaults\r\nchardet                   3.0.4            py36h96c241c_1    defaults\r\nclick                     6.7              py36hec950be_0    defaults\r\ncloudpickle               0.4.0            py36h13b7e56_0    defaults\r\nclyent                    1.2.2            py36hae3ad88_0    defaults\r\ncolorama                  0.3.9            py36hd29a30c_0    defaults\r\nconda                     4.4.4                    py36_0    defaults\r\nconda-build               3.0.27           py36hb78d8cd_0    defaults\r\nconda-env                 2.6.0                h36134e3_0    defaults\r\nconda-verify              2.0.0            py36he837df3_0    defaults\r\ncontextlib2               0.5.5            py36hd66e5e7_0    defaults\r\ncryptography              2.0.3            py36h22d4226_1    defaults\r\ncurl                      7.55.1               h7601780_3    defaults\r\ncycler                    0.10.0           py36hfc81398_0    defaults\r\ncython                    0.26.1           py36hd51f8eb_0    defaults\r\ncytoolz                   0.8.2            py36h290905f_0    defaults\r\ndask                      0.15.3           py36hc3ad2d6_0    defaults\r\ndask-core                 0.15.3           py36hc0be6b7_0    defaults\r\ndatashape                 0.5.4            py36hfb22df8_0    defaults\r\ndbus                      1.10.22              h50d9ad6_0    defaults\r\ndecorator                 4.1.2            py36h69a1b52_0    defaults\r\ndistributed               1.19.1           py36h4ae75d2_0    defaults\r\ndocutils                  0.14             py36hbfde631_0    defaults\r\nentrypoints               0.2.3            py36hd81d71f_2    defaults\r\net_xmlfile                1.0.1            py36h1315bdc_0    defaults\r\nexpat                     2.2.4                h8f26bf8_1    defaults\r\nfastcache                 1.0.2            py36h8606a76_0    defaults\r\nfilelock                  2.0.12           py36h0d0b4fb_0    defaults\r\nflask                     0.12.2           py36h5658096_0    defaults\r\nflask-cors                3.0.3            py36h7387b97_0    defaults\r\nfreetype                  2.8                  h143eb01_0    defaults\r\nget_terminal_size         1.0.0                h7520d66_0    defaults\r\ngettext                   0.19.8.1             hb0f4f8b_2    defaults\r\ngevent                    1.2.2            py36ha70b9d6_0    defaults\r\nglib                      2.53.6               ha08cb78_1    defaults\r\nglob2                     0.5              py36h12393a9_0    defaults\r\ngmp                       6.1.2                h4a9834d_0    defaults\r\ngmpy2                     2.0.8            py36h7ef02cb_1    defaults\r\ngreenlet                  0.4.12           py36hf09ba7b_0    defaults\r\nh5py                      2.7.0            py36h6400cee_1    defaults\r\nhdf5                      1.10.1               h6090a45_0    defaults\r\nheapdict                  1.0.0            py36h27a9ac6_0    defaults\r\nhtml5lib                  0.999999999      py36h79312fd_0    defaults\r\nicu                       58.2                 hea21ae5_0    defaults\r\nidna                      2.6              py36h8628d0a_1    defaults\r\nimageio                   2.2.0            py36h5e01289_0    defaults\r\nimagesize                 0.7.1            py36h3495948_0    defaults\r\nintel-openmp              2018.0.0             h68bdfb3_7    defaults\r\nipykernel                 4.6.1            py36h3208c25_0    defaults\r\nipython                   6.1.0            py36hf612aae_1    defaults\r\nipython_genutils          0.2.0            py36h241746c_0    defaults\r\nipywidgets                7.0.0            py36h24d3910_0    defaults\r\nisort                     4.2.15           py36hceb2a01_0    defaults\r\nitsdangerous              0.24             py36h49fbb8d_1    defaults\r\njbig                      2.1                  h4d881f8_0    defaults\r\njdcal                     1.3              py36h1986823_0    defaults\r\njedi                      0.10.2           py36h6325097_0    defaults\r\njinja2                    2.9.6            py36hde4beb4_1    defaults\r\njpeg                      9b                   haccd157_1    defaults\r\njsonschema                2.6.0            py36hb385e00_0    defaults\r\njupyter                   1.0.0            py36h598a6cc_0    defaults\r\njupyter_client            5.1.0            py36hf6c435f_0    defaults\r\njupyter_console           5.2.0            py36hccf5b1c_1    defaults\r\njupyter_core              4.3.0            py36h93810fe_0    defaults\r\njupyterlab                0.27.0           py36hd3092eb_2    defaults\r\njupyterlab_launcher       0.4.0            py36h93e02e9_0    defaults\r\nlazy-object-proxy         1.3.1            py36h2fbbe47_0    defaults\r\nlibcxx                    4.0.1                h579ed51_0    defaults\r\nlibcxxabi                 4.0.1                hebd6815_0    defaults\r\nlibedit                   3.1                  hb4e282d_0    defaults\r\nlibffi                    3.2.1                hd939716_3    defaults\r\nlibgfortran               3.0.1                h93005f0_2    defaults\r\nlibiconv                  1.15                 h99df5da_5    defaults\r\nlibpng                    1.6.32               hce72d48_2    defaults\r\nlibsodium                 1.0.13               hba5e272_2    defaults\r\nlibssh2                   1.8.0                h1218725_2    defaults\r\nlibtiff                   4.0.8                h8cd0352_9    defaults\r\nlibxml2                   2.9.4                hbd0960b_5    defaults\r\nlibxslt                   1.1.29               h95a2935_5    defaults\r\nllvmlite                  0.20.0                   py36_0    defaults\r\nlocket                    0.2.0            py36hca03003_1    defaults\r\nlxml                      4.1.0            py36h8179fc0_0    defaults\r\nlzo                       2.10                 hb6b8854_1    defaults\r\nmarkupsafe                1.0              py36h3a1e703_1    defaults\r\nmatplotlib                2.1.0            py36h5068139_0    defaults\r\nmccabe                    0.6.1            py36hdaeb55d_0    defaults\r\nmistune                   0.7.4            py36hccd6237_0    defaults\r\nmkl                       2018.0.0             h5ef208c_6    defaults\r\nmkl-service               1.1.2            py36h7ea6df4_4    defaults\r\nmpc                       1.0.3                hc455b36_4    defaults\r\nmpfr                      3.1.5                h7fa3772_1    defaults\r\nmpmath                    0.19             py36h9185fea_2    defaults\r\nmsgpack-python            0.4.8            py36h46767b2_0    defaults\r\nmultipledispatch          0.4.9            py36hc5f92b5_0    defaults\r\nnavigator-updater         0.1.0            py36h7aee5fb_0    defaults\r\nnbconvert                 5.3.1            py36h810822e_0    defaults\r\nnbformat                  4.4.0            py36h827af21_0    defaults\r\nncurses                   6.0                  ha932d30_1    defaults\r\nnetworkx                  2.0              py36hefccab9_0    defaults\r\nnltk                      3.2.4            py36h27d1ea0_0    defaults\r\nnose                      1.3.7            py36h73fae2b_2    defaults\r\nnotebook                  5.0.0            py36h462289e_2    defaults\r\nnumba                     0.35.0              np113py36_6    defaults\r\nnumexpr                   2.6.2            py36h0f4f1da_1    defaults\r\nnumpy                     1.13.3           py36h2cdce51_0    defaults\r\nnumpydoc                  0.7.0            py36he54d08e_0    defaults\r\nodo                       0.5.1            py36hc1af34a_0    defaults\r\nolefile                   0.44             py36ha08bf50_0    defaults\r\nopenpyxl                  2.4.8            py36he899640_1    defaults\r\nopenssl                   1.0.2o               h26aff7b_0    defaults\r\npackaging                 16.8             py36he5e8135_0    defaults\r\npandas                    0.20.3           py36hd6655d8_2    defaults\r\npandoc                    1.19.2.1             ha5e8f32_1    defaults\r\npandocfilters             1.4.2            py36h3b0b094_1    defaults\r\npartd                     0.3.8            py36hf5c4cb8_0    defaults\r\npath.py                   10.3.1           py36hd33c240_0    defaults\r\npathlib2                  2.3.0            py36h877a6d8_0    defaults\r\npatsy                     0.4.1            py36ha1b3fa5_0    defaults\r\npcre                      8.41                 h29eefc5_0    defaults\r\npep8                      1.7.0            py36hc268eb1_0    defaults\r\npexpect                   4.2.1            py36h3eac828_0    defaults\r\npickleshare               0.7.4            py36hf512f8e_0    defaults\r\npillow                    4.2.1            py36h0263179_0    defaults\r\npip                       9.0.1            py36hbd95645_3    defaults\r\npkginfo                   1.4.1            py36h25bf955_0    defaults\r\nply                       3.10             py36h10e714e_0    defaults\r\nprompt_toolkit            1.0.15           py36haeda067_0    defaults\r\npsutil                    5.4.0            py36ha052210_0    defaults\r\nptyprocess                0.5.2            py36he6521c3_0    defaults\r\npy                        1.4.34           py36hecf431b_1    defaults\r\npycodestyle               2.3.1            py36h83e8646_0    defaults\r\npycosat                   0.6.3            py36hee92d8f_0    defaults\r\npycparser                 2.18             py36h724b2fc_1    defaults\r\npycrypto                  2.6.1            py36h72f2894_1    defaults\r\npycurl                    7.43.0           py36hdb90038_3    defaults\r\npyflakes                  1.6.0            py36hea45e83_0    defaults\r\npygments                  2.2.0            py36h240cd3f_0    defaults\r\npylint                    1.7.4            py36hdee9077_0    defaults\r\npyodbc                    4.0.17           py36h5478161_0    defaults\r\npyopenssl                 17.2.0           py36h5d7bf08_0    defaults\r\npyparsing                 2.2.0            py36hb281f35_0    defaults\r\npyqt                      5.6.0            py36he5c6137_6    defaults\r\npysocks                   1.6.7            py36hfa33cec_1    defaults\r\npytables                  3.4.2            py36hfbd7ab0_2    defaults\r\npytest                    3.2.1            py36h9963153_1    defaults\r\npython                    3.6.3                h6804ab2_0    defaults\r\npython-dateutil           2.6.1            py36h86d2abb_1    defaults\r\npython.app                2                py36h7fe2238_6    defaults\r\npytz                      2017.2           py36h2e7dfbc_1    defaults\r\npywavelets                0.5.2            py36h2710a04_0    defaults\r\npyyaml                    3.12             py36h2ba1e63_1    defaults\r\npyzmq                     16.0.2           py36h087ffad_2    defaults\r\nqt                        5.6.2               h9975529_14    defaults\r\nqtawesome                 0.4.4            py36h468c6fb_0    defaults\r\nqtconsole                 4.3.1            py36hd96c0ff_0    defaults\r\nqtpy                      1.3.1            py36h16bb863_0    defaults\r\nreadline                  7.0                  h81b24a6_3    defaults\r\nrequests                  2.18.4           py36h4516966_1    defaults\r\nrope                      0.10.5           py36h5764ad1_0    defaults\r\nruamel_yaml               0.11.14          py36h9d7ade0_2    defaults\r\nscikit-image              0.13.0           py36h398857d_1    defaults\r\nscikit-learn              0.19.1           py36hffbff8c_0    defaults\r\nscipy                     0.19.1           py36h3e758e1_3    defaults\r\nseaborn                   0.8.0            py36h74df97e_0    defaults\r\nsetuptools                36.5.0           py36h2134326_0    defaults\r\nsimplegeneric             0.8.1            py36he5b5b09_0    defaults\r\nsingledispatch            3.4.0.3          py36hf20db9d_0    defaults\r\nsip                       4.18.1           py36h2824476_2    defaults\r\nsix                       1.11.0           py36h0e22d5e_1    defaults\r\nsnowballstemmer           1.2.1            py36h6c7b616_0    defaults\r\nsortedcollections         0.5.3            py36he9c3ed6_0    defaults\r\nsortedcontainers          1.5.7            py36ha982688_0    defaults\r\nsphinx                    1.6.3            py36hcd1b3e7_0    defaults\r\nsphinxcontrib             1.0              py36h9364dc8_1    defaults\r\nsphinxcontrib-websupport  1.0.1            py36h92f4a7a_1    defaults\r\nspyder                    3.2.4            py36h908396f_0    defaults\r\nsqlalchemy                1.1.13           py36h156b851_0    defaults\r\nsqlite                    3.20.1               h900c3b0_1    defaults\r\nstatsmodels               0.8.0            py36h9c68fc9_0    defaults\r\nsympy                     1.1.1            py36h7f3cf04_0    defaults\r\ntblib                     1.3.2            py36hda67792_0    defaults\r\nterminado                 0.6              py36h656782e_0    defaults\r\ntestpath                  0.3.1            py36h625a49b_0    defaults\r\ntk                        8.6.7                hcdce994_1    defaults\r\ntoolz                     0.8.2            py36h7b95164_0    defaults\r\ntornado                   4.5.2            py36h468dda9_0    defaults\r\ntraitlets                 4.3.2            py36h65bd3ce_0    defaults\r\ntyping                    3.6.2            py36haa2d9ef_0    defaults\r\nunicodecsv                0.14.1           py36he531d66_0    defaults\r\nunixodbc                  2.3.4                h4cb4dde_1    defaults\r\nurllib3                   1.22             py36h68b9469_0    defaults\r\nwcwidth                   0.1.7            py36h8c6ec74_0    defaults\r\nwebencodings              0.5.1            py36h3b9701d_1    defaults\r\nwerkzeug                  0.12.2           py36h168efa1_0    defaults\r\nwheel                     0.29.0           py36h3597b6d_1    defaults\r\nwidgetsnbextension        3.0.2            py36h91f43ea_1    defaults\r\nwrapt                     1.10.11          py36hc29e774_0    defaults\r\nxlrd                      1.1.0            py36h336f4a2_1    defaults\r\nxlsxwriter                1.0.2            py36h3736301_0    defaults\r\nxlwings                   0.11.4           py36hc75f156_0    defaults\r\nxlwt                      1.2.0            py36h5ad1178_0    defaults\r\nxz                        5.2.3                ha24016e_1    defaults\r\nyaml                      0.1.7                hff548bb_1    defaults\r\nzeromq                    4.2.2                h131e0f7_1    defaults\r\nzict                      0.1.3            py36h71da714_0    defaults\r\nzlib                      1.2.11               h60db283_1    defaults\r\n```\r\n"},"comment":{"url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/comments/422364053","html_url":"https://github.com/ContinuumIO/anaconda-issues/issues/9087#issuecomment-422364053","issue_url":"https://api.github.com/repos/ContinuumIO/anaconda-issues/issues/9087","id":422364053,"node_id":"MDEyOklzc3VlQ29tbWVudDQyMjM2NDA1Mw==","user":{"login":"wilfriedh","id":1798524,"node_id":"MDQ6VXNlcjE3OTg1MjQ=","avatar_url":"https://avatars0.githubusercontent.com/u/1798524?v=4","gravatar_id":"","url":"https://api.github.com/users/wilfriedh","html_url":"https://github.com/wilfriedh","followers_url":"https://api.github.com/users/wilfriedh/followers","following_url":"https://api.github.com/users/wilfriedh/following{/other_user}","gists_url":"https://api.github.com/users/wilfriedh/gists{/gist_id}","starred_url":"https://api.github.com/users/wilfriedh/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wilfriedh/subscriptions","organizations_url":"https://api.github.com/users/wilfriedh/orgs","repos_url":"https://api.github.com/users/wilfriedh/repos","events_url":"https://api.github.com/users/wilfriedh/events{/privacy}","received_events_url":"https://api.github.com/users/wilfriedh/received_events","type":"User","site_admin":false},"created_at":"2018-09-18T11:57:45Z","updated_at":"2018-09-18T11:57:45Z","author_association":"NONE","body":"It looks like I have the same problem, \r\nbut the real problem is that Navigator displays a package as updateable while in fact it is already up to date. \r\nE.g. \r\n- Navigator displays that Spyder can be updated to 3.2.8 while Sypder's Help-About already displays version 3.2.8. \r\n- Navigator displays numpy can be updated to 1.14.3 while .../numpy/version.py lists version 1.14.3.\r\n"}}
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