{"action":"created","comment":{"url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/comments/226534987","pull_request_review_id":166380648,"id":226534987,"node_id":"MDI0OlB1bGxSZXF1ZXN0UmV2aWV3Q29tbWVudDIyNjUzNDk4Nw==","diff_hunk":"@@ -0,0 +1,37 @@\n+#!/usr/bin/env python3\n+\n+import os\n+import sqlite3\n+\n+data_folder = \"../../../mirna_target_prediction/data/\"\n+\n+required_files = [\"raw/UTR_Sequences.txt\",\n+\t\t\t\t  \"processed/mirna_id_dictionary.tsv\",\n+\t\t\t\t  \"processed/gene_id_dictionary.tsv\",\n+\t\t\t\t  \"processed/scored_interactions_processed.tsv\"]","path":"mirna_explorer/repository/create_database.py","position":11,"original_position":11,"commit_id":"695338c8133923ef3bfd651f54889f5105b762ac","original_commit_id":"695338c8133923ef3bfd651f54889f5105b762ac","user":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"body":"Integrated `pycodestyle` which Emacs, we are not going to have PEP8 style errors anymore ;-)\r\n","created_at":"2018-10-19T05:06:21Z","updated_at":"2018-10-19T05:06:21Z","html_url":"https://github.com/LucaMarconato/mirna_explorer/pull/2#discussion_r226534987","pull_request_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2","author_association":"OWNER","_links":{"self":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/comments/226534987"},"html":{"href":"https://github.com/LucaMarconato/mirna_explorer/pull/2#discussion_r226534987"},"pull_request":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2"}},"in_reply_to_id":226314413},"pull_request":{"url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2","id":223823144,"node_id":"MDExOlB1bGxSZXF1ZXN0MjIzODIzMTQ0","html_url":"https://github.com/LucaMarconato/mirna_explorer/pull/2","diff_url":"https://github.com/LucaMarconato/mirna_explorer/pull/2.diff","patch_url":"https://github.com/LucaMarconato/mirna_explorer/pull/2.patch","issue_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/2","number":2,"state":"open","locked":false,"title":"Written a Python script for creating the db from a .sql script. ","user":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"body":"The database does not populated with the data yet, I am still working on it.","created_at":"2018-10-18T04:35:40Z","updated_at":"2018-10-19T05:06:21Z","closed_at":null,"merged_at":null,"merge_commit_sha":"ffc786b8e845c1e9378f4f70e7c304ac215b08ea","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[{"id":1089329188,"node_id":"MDU6TGFiZWwxMDg5MzI5MTg4","url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/labels/enhancement","name":"enhancement","color":"a2eeef","default":true}],"milestone":null,"commits_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2/commits","review_comments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2/comments","review_comment_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/comments{/number}","comments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/2/comments","statuses_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/statuses/695338c8133923ef3bfd651f54889f5105b762ac","head":{"label":"LucaMarconato:creating_the_db","ref":"creating_the_db","sha":"695338c8133923ef3bfd651f54889f5105b762ac","user":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"repo":{"id":152818652,"node_id":"MDEwOlJlcG9zaXRvcnkxNTI4MTg2NTI=","name":"mirna_explorer","full_name":"LucaMarconato/mirna_explorer","private":false,"owner":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"html_url":"https://github.com/LucaMarconato/mirna_explorer","description":"A set of curated graphical representations to explore the simultaneous effect of hundreds of microRNAs onto thousands of genes.","fork":false,"url":"https://api.github.com/repos/LucaMarconato/mirna_explorer","forks_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/forks","keys_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/keys{/key_id}","collaborators_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/teams","hooks_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/hooks","issue_events_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/events{/number}","events_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/events","assignees_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/assignees{/user}","branches_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/branches{/branch}","tags_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/tags","blobs_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/refs{/sha}","trees_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/trees{/sha}","statuses_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/statuses/{sha}","languages_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/languages","stargazers_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/stargazers","contributors_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/contributors","subscribers_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/subscribers","subscription_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/subscription","commits_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/commits{/sha}","git_commits_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/commits{/sha}","comments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/comments{/number}","issue_comment_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/comments{/number}","contents_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/contents/{+path}","compare_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/compare/{base}...{head}","merges_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/merges","archive_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/downloads","issues_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues{/number}","pulls_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls{/number}","milestones_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/milestones{/number}","notifications_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/labels{/name}","releases_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/releases{/id}","deployments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/deployments","created_at":"2018-10-12T23:51:44Z","updated_at":"2018-10-16T20:43:50Z","pushed_at":"2018-10-19T03:28:24Z","git_url":"git://github.com/LucaMarconato/mirna_explorer.git","ssh_url":"git@github.com:LucaMarconato/mirna_explorer.git","clone_url":"https://github.com/LucaMarconato/mirna_explorer.git","svn_url":"https://github.com/LucaMarconato/mirna_explorer","homepage":"","size":1059,"stargazers_count":0,"watchers_count":0,"language":null,"has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":1,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit","node_id":"MDc6TGljZW5zZTEz"},"forks":0,"open_issues":1,"watchers":0,"default_branch":"master"}},"base":{"label":"LucaMarconato:master","ref":"master","sha":"6a98aa31e2de79bf3b26e6a86bcc69b8310522a4","user":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"repo":{"id":152818652,"node_id":"MDEwOlJlcG9zaXRvcnkxNTI4MTg2NTI=","name":"mirna_explorer","full_name":"LucaMarconato/mirna_explorer","private":false,"owner":{"login":"LucaMarconato","id":2664412,"node_id":"MDQ6VXNlcjI2NjQ0MTI=","avatar_url":"https://avatars3.githubusercontent.com/u/2664412?v=4","gravatar_id":"","url":"https://api.github.com/users/LucaMarconato","html_url":"https://github.com/LucaMarconato","followers_url":"https://api.github.com/users/LucaMarconato/followers","following_url":"https://api.github.com/users/LucaMarconato/following{/other_user}","gists_url":"https://api.github.com/users/LucaMarconato/gists{/gist_id}","starred_url":"https://api.github.com/users/LucaMarconato/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/LucaMarconato/subscriptions","organizations_url":"https://api.github.com/users/LucaMarconato/orgs","repos_url":"https://api.github.com/users/LucaMarconato/repos","events_url":"https://api.github.com/users/LucaMarconato/events{/privacy}","received_events_url":"https://api.github.com/users/LucaMarconato/received_events","type":"User","site_admin":false},"html_url":"https://github.com/LucaMarconato/mirna_explorer","description":"A set of curated graphical representations to explore the simultaneous effect of hundreds of microRNAs onto thousands of genes.","fork":false,"url":"https://api.github.com/repos/LucaMarconato/mirna_explorer","forks_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/forks","keys_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/keys{/key_id}","collaborators_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/teams","hooks_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/hooks","issue_events_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/events{/number}","events_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/events","assignees_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/assignees{/user}","branches_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/branches{/branch}","tags_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/tags","blobs_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/refs{/sha}","trees_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/trees{/sha}","statuses_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/statuses/{sha}","languages_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/languages","stargazers_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/stargazers","contributors_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/contributors","subscribers_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/subscribers","subscription_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/subscription","commits_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/commits{/sha}","git_commits_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/git/commits{/sha}","comments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/comments{/number}","issue_comment_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/comments{/number}","contents_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/contents/{+path}","compare_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/compare/{base}...{head}","merges_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/merges","archive_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/downloads","issues_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues{/number}","pulls_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls{/number}","milestones_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/milestones{/number}","notifications_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/labels{/name}","releases_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/releases{/id}","deployments_url":"https://api.github.com/repos/LucaMarconato/mirna_explorer/deployments","created_at":"2018-10-12T23:51:44Z","updated_at":"2018-10-16T20:43:50Z","pushed_at":"2018-10-19T03:28:24Z","git_url":"git://github.com/LucaMarconato/mirna_explorer.git","ssh_url":"git@github.com:LucaMarconato/mirna_explorer.git","clone_url":"https://github.com/LucaMarconato/mirna_explorer.git","svn_url":"https://github.com/LucaMarconato/mirna_explorer","homepage":"","size":1059,"stargazers_count":0,"watchers_count":0,"language":null,"has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":1,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit","node_id":"MDc6TGljZW5zZTEz"},"forks":0,"open_issues":1,"watchers":0,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2"},"html":{"href":"https://github.com/LucaMarconato/mirna_explorer/pull/2"},"issue":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/2"},"comments":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/issues/2/comments"},"review_comments":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2/comments"},"review_comment":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/pulls/2/commits"},"statuses":{"href":"https://api.github.com/repos/LucaMarconato/mirna_explorer/statuses/695338c8133923ef3bfd651f54889f5105b762ac"}},"author_association":"OWNER"}}
{"actor":{"display_login":"LucaMarconato"}}