{"action":"closed","issue":{"url":"https://api.github.com/repos/bedops/bedops/issues/212","repository_url":"https://api.github.com/repos/bedops/bedops","labels_url":"https://api.github.com/repos/bedops/bedops/issues/212/labels{/name}","comments_url":"https://api.github.com/repos/bedops/bedops/issues/212/comments","events_url":"https://api.github.com/repos/bedops/bedops/issues/212/events","html_url":"https://github.com/bedops/bedops/issues/212","id":379287997,"node_id":"MDU6SXNzdWUzNzkyODc5OTc=","number":212,"title":"bedops --intersect outputs empty file when input contains comments","user":{"login":"rioualen","id":12270885,"node_id":"MDQ6VXNlcjEyMjcwODg1","avatar_url":"https://avatars0.githubusercontent.com/u/12270885?v=4","gravatar_id":"","url":"https://api.github.com/users/rioualen","html_url":"https://github.com/rioualen","followers_url":"https://api.github.com/users/rioualen/followers","following_url":"https://api.github.com/users/rioualen/following{/other_user}","gists_url":"https://api.github.com/users/rioualen/gists{/gist_id}","starred_url":"https://api.github.com/users/rioualen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rioualen/subscriptions","organizations_url":"https://api.github.com/users/rioualen/orgs","repos_url":"https://api.github.com/users/rioualen/repos","events_url":"https://api.github.com/users/rioualen/events{/privacy}","received_events_url":"https://api.github.com/users/rioualen/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2018-11-09T19:15:54Z","updated_at":"2018-11-09T21:10:21Z","closed_at":"2018-11-09T21:10:21Z","author_association":"NONE","body":"Hello, \r\nI'm using bedops intersect with bed files obtained from peak-calling. However the output turns out to be empty when the input files contain commented lines (homer output contains a rather large commented header). Deleting said lines seems to fix the problem."}}
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