{"action":"created","issue":{"url":"https://api.github.com/repos/RobertsLab/resources/issues/252","repository_url":"https://api.github.com/repos/RobertsLab/resources","labels_url":"https://api.github.com/repos/RobertsLab/resources/issues/252/labels{/name}","comments_url":"https://api.github.com/repos/RobertsLab/resources/issues/252/comments","events_url":"https://api.github.com/repos/RobertsLab/resources/issues/252/events","html_url":"https://github.com/RobertsLab/resources/issues/252","id":321282999,"number":252,"title":"Deduplication error","user":{"login":"yaaminiv","id":22335838,"avatar_url":"https://avatars0.githubusercontent.com/u/22335838?v=4","gravatar_id":"","url":"https://api.github.com/users/yaaminiv","html_url":"https://github.com/yaaminiv","followers_url":"https://api.github.com/users/yaaminiv/followers","following_url":"https://api.github.com/users/yaaminiv/following{/other_user}","gists_url":"https://api.github.com/users/yaaminiv/gists{/gist_id}","starred_url":"https://api.github.com/users/yaaminiv/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/yaaminiv/subscriptions","organizations_url":"https://api.github.com/users/yaaminiv/orgs","repos_url":"https://api.github.com/users/yaaminiv/repos","events_url":"https://api.github.com/users/yaaminiv/events{/privacy}","received_events_url":"https://api.github.com/users/yaaminiv/received_events","type":"User","site_admin":false},"labels":[{"id":664409261,"url":"https://api.github.com/repos/RobertsLab/resources/labels/question","name":"question","color":"cc317c","default":true}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":4,"created_at":"2018-05-08T17:47:36Z","updated_at":"2018-05-08T18:11:05Z","closed_at":null,"author_association":"CONTRIBUTOR","body":"Using the same code from [Steven's lab notebook](https://github.com/sr320/nb-2018/blob/master/C_virginica/13-OAKL-fullpipe.ipynb) for `deduplicate_bismark`. Got the following error:\r\n\r\n![untitled2](https://user-images.githubusercontent.com/22335838/39773435-f74a87ac-52ac-11e8-8763-c2962c8fcff6.png)\r\n\r\nThere is nothing in the help menu that says I need to specify a number for -p!\r\n\r\n![untitled3](https://user-images.githubusercontent.com/22335838/39773495-2b836c5a-52ad-11e8-937a-0805a5b0dfeb.png)\r\n\r\nDid I misinterpret something?"},"comment":{"url":"https://api.github.com/repos/RobertsLab/resources/issues/comments/387492659","html_url":"https://github.com/RobertsLab/resources/issues/252#issuecomment-387492659","issue_url":"https://api.github.com/repos/RobertsLab/resources/issues/252","id":387492659,"user":{"login":"sr320","id":4442039,"avatar_url":"https://avatars1.githubusercontent.com/u/4442039?v=4","gravatar_id":"","url":"https://api.github.com/users/sr320","html_url":"https://github.com/sr320","followers_url":"https://api.github.com/users/sr320/followers","following_url":"https://api.github.com/users/sr320/following{/other_user}","gists_url":"https://api.github.com/users/sr320/gists{/gist_id}","starred_url":"https://api.github.com/users/sr320/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sr320/subscriptions","organizations_url":"https://api.github.com/users/sr320/orgs","repos_url":"https://api.github.com/users/sr320/repos","events_url":"https://api.github.com/users/sr320/events{/privacy}","received_events_url":"https://api.github.com/users/sr320/received_events","type":"User","site_admin":false},"created_at":"2018-05-08T18:11:05Z","updated_at":"2018-05-08T18:11:05Z","author_association":"OWNER","body":"Also you should get in habit of writing standard error out to file so notebook can be viewed more readily."}}
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