{"action":"created","issue":{"url":"https://api.github.com/repos/stephenslab/susieR/issues/27","repository_url":"https://api.github.com/repos/stephenslab/susieR","labels_url":"https://api.github.com/repos/stephenslab/susieR/issues/27/labels{/name}","comments_url":"https://api.github.com/repos/stephenslab/susieR/issues/27/comments","events_url":"https://api.github.com/repos/stephenslab/susieR/issues/27/events","html_url":"https://github.com/stephenslab/susieR/issues/27","id":341969091,"node_id":"MDU6SXNzdWUzNDE5NjkwOTE=","number":27,"title":"Rename susie plot functions","user":{"login":"gaow","id":917985,"node_id":"MDQ6VXNlcjkxNzk4NQ==","avatar_url":"https://avatars1.githubusercontent.com/u/917985?v=4","gravatar_id":"","url":"https://api.github.com/users/gaow","html_url":"https://github.com/gaow","followers_url":"https://api.github.com/users/gaow/followers","following_url":"https://api.github.com/users/gaow/following{/other_user}","gists_url":"https://api.github.com/users/gaow/gists{/gist_id}","starred_url":"https://api.github.com/users/gaow/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gaow/subscriptions","organizations_url":"https://api.github.com/users/gaow/orgs","repos_url":"https://api.github.com/users/gaow/repos","events_url":"https://api.github.com/users/gaow/events{/privacy}","received_events_url":"https://api.github.com/users/gaow/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"gaow","id":917985,"node_id":"MDQ6VXNlcjkxNzk4NQ==","avatar_url":"https://avatars1.githubusercontent.com/u/917985?v=4","gravatar_id":"","url":"https://api.github.com/users/gaow","html_url":"https://github.com/gaow","followers_url":"https://api.github.com/users/gaow/followers","following_url":"https://api.github.com/users/gaow/following{/other_user}","gists_url":"https://api.github.com/users/gaow/gists{/gist_id}","starred_url":"https://api.github.com/users/gaow/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gaow/subscriptions","organizations_url":"https://api.github.com/users/gaow/orgs","repos_url":"https://api.github.com/users/gaow/repos","events_url":"https://api.github.com/users/gaow/events{/privacy}","received_events_url":"https://api.github.com/users/gaow/received_events","type":"User","site_admin":false},"assignees":[{"login":"gaow","id":917985,"node_id":"MDQ6VXNlcjkxNzk4NQ==","avatar_url":"https://avatars1.githubusercontent.com/u/917985?v=4","gravatar_id":"","url":"https://api.github.com/users/gaow","html_url":"https://github.com/gaow","followers_url":"https://api.github.com/users/gaow/followers","following_url":"https://api.github.com/users/gaow/following{/other_user}","gists_url":"https://api.github.com/users/gaow/gists{/gist_id}","starred_url":"https://api.github.com/users/gaow/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gaow/subscriptions","organizations_url":"https://api.github.com/users/gaow/orgs","repos_url":"https://api.github.com/users/gaow/repos","events_url":"https://api.github.com/users/gaow/events{/privacy}","received_events_url":"https://api.github.com/users/gaow/received_events","type":"User","site_admin":false},{"login":"stephens999","id":1800389,"node_id":"MDQ6VXNlcjE4MDAzODk=","avatar_url":"https://avatars2.githubusercontent.com/u/1800389?v=4","gravatar_id":"","url":"https://api.github.com/users/stephens999","html_url":"https://github.com/stephens999","followers_url":"https://api.github.com/users/stephens999/followers","following_url":"https://api.github.com/users/stephens999/following{/other_user}","gists_url":"https://api.github.com/users/stephens999/gists{/gist_id}","starred_url":"https://api.github.com/users/stephens999/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/stephens999/subscriptions","organizations_url":"https://api.github.com/users/stephens999/orgs","repos_url":"https://api.github.com/users/stephens999/repos","events_url":"https://api.github.com/users/stephens999/events{/privacy}","received_events_url":"https://api.github.com/users/stephens999/received_events","type":"User","site_admin":false}],"milestone":null,"comments":8,"created_at":"2018-07-17T15:24:28Z","updated_at":"2018-09-11T22:35:06Z","closed_at":null,"author_association":"MEMBER","body":"Currently we've got `susie_pplot` that plots p-values (convert to -log(p)), PIP or z-scores (convert to -log(p)), and `susie_iterplot` that plots an animation for the VEM fitting process, as you can see [on this page](https://gaow.github.io/mvarbvs/analysis/20180709_SplicingQTL_Detailed.html).\r\n\r\nMatthew has commented that we should make the function name `susie_verb_noun`, and in this case `susie_plot_something`. Are there any name suggestions for the `something`? eg. for current `susie_iterplot` change to  `susie_plot_path`? or `susie_plot_fit`? For `susie_pplot`, change to `susie_plot_features`?"},"comment":{"url":"https://api.github.com/repos/stephenslab/susieR/issues/comments/420449147","html_url":"https://github.com/stephenslab/susieR/issues/27#issuecomment-420449147","issue_url":"https://api.github.com/repos/stephenslab/susieR/issues/27","id":420449147,"node_id":"MDEyOklzc3VlQ29tbWVudDQyMDQ0OTE0Nw==","user":{"login":"gaow","id":917985,"node_id":"MDQ6VXNlcjkxNzk4NQ==","avatar_url":"https://avatars1.githubusercontent.com/u/917985?v=4","gravatar_id":"","url":"https://api.github.com/users/gaow","html_url":"https://github.com/gaow","followers_url":"https://api.github.com/users/gaow/followers","following_url":"https://api.github.com/users/gaow/following{/other_user}","gists_url":"https://api.github.com/users/gaow/gists{/gist_id}","starred_url":"https://api.github.com/users/gaow/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gaow/subscriptions","organizations_url":"https://api.github.com/users/gaow/orgs","repos_url":"https://api.github.com/users/gaow/repos","events_url":"https://api.github.com/users/gaow/events{/privacy}","received_events_url":"https://api.github.com/users/gaow/received_events","type":"User","site_admin":false},"created_at":"2018-09-11T22:35:06Z","updated_at":"2018-09-11T22:35:06Z","author_association":"MEMBER","body":"> maybe yaxis should be yval ?\r\n\r\nSure\r\n\r\n> I suggest by default we set `CS=NULL` \r\n\r\nThe problem is `susie_get_CS` does need `Xcorr` to filter CS. So we are back to providing input data `X`. I do not like the idea of adding `Xcorr` to susie object ...\r\n"}}
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