{"action":"closed","issue":{"url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/599","repository_url":"https://api.github.com/repos/PacificBiosciences/FALCON","labels_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/599/labels{/name}","comments_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/599/comments","events_url":"https://api.github.com/repos/PacificBiosciences/FALCON/issues/599/events","html_url":"https://github.com/PacificBiosciences/FALCON/issues/599","id":287628588,"number":599,"title":"Deprecated setting in config","user":{"login":"mictadlo","id":588297,"avatar_url":"https://avatars3.githubusercontent.com/u/588297?v=4","gravatar_id":"","url":"https://api.github.com/users/mictadlo","html_url":"https://github.com/mictadlo","followers_url":"https://api.github.com/users/mictadlo/followers","following_url":"https://api.github.com/users/mictadlo/following{/other_user}","gists_url":"https://api.github.com/users/mictadlo/gists{/gist_id}","starred_url":"https://api.github.com/users/mictadlo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mictadlo/subscriptions","organizations_url":"https://api.github.com/users/mictadlo/orgs","repos_url":"https://api.github.com/users/mictadlo/repos","events_url":"https://api.github.com/users/mictadlo/events{/privacy}","received_events_url":"https://api.github.com/users/mictadlo/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-01-11T00:54:01Z","updated_at":"2018-02-26T21:43:58Z","closed_at":"2018-02-26T21:43:58Z","author_association":"NONE","body":"Hi,\r\nCould you please update the `cfg` files inside `example` folder with the latest setting names?\r\n\r\n```\r\n/home/mictadlo/projects/FALCON/falcon_kit/run_support.py:194: UserWarning: Deprecated setting in config: 'pa_concurrent_jobs' -- Prefer da_concurrent_jobs and la_concurrent_jobs separately\r\n  \"Deprecated setting in config: 'pa_concurrent_jobs' -- Prefer da_concurrent_jobs and la_concurrent_jobs separately\")\r\n/home/mictadlo/projects/FALCON/falcon_kit/run_support.py:199: UserWarning: Deprecated setting in config: 'ovlp_concurrent_jobs' -- Prefer pda_concurrent_jobs and pla_concurrent_jobs separately\r\n  \"Deprecated setting in config: 'ovlp_concurrent_jobs' -- Prefer pda_concurrent_jobs and pla_concurrent_jobs separately\")\r\n[INFO] No target specified, assuming \"assembly\" as target \r\n/home/mictadlo/projects/FALCON/falcon_kit/run_support.py:456: UserWarning: Unexpected keys in input config: set(['pa_concurrent_jobs', 'ovlp_concurrent_jobs', 'jobqueue'])\r\n  warnings.warn(\"Unexpected keys in input config: %s\" % repr(unused))\r\n```\r\nThank you in advance.\r\n\r\nMichal"}}
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