{"action":"opened","issue":{"url":"https://api.github.com/repos/theaidenlab/3d-dna/issues/17","repository_url":"https://api.github.com/repos/theaidenlab/3d-dna","labels_url":"https://api.github.com/repos/theaidenlab/3d-dna/issues/17/labels{/name}","comments_url":"https://api.github.com/repos/theaidenlab/3d-dna/issues/17/comments","events_url":"https://api.github.com/repos/theaidenlab/3d-dna/issues/17/events","html_url":"https://github.com/theaidenlab/3d-dna/issues/17","id":329266338,"node_id":"MDU6SXNzdWUzMjkyNjYzMzg=","number":17,"title":"Questions for getting the detail imformation between original scaffolds and the final assembly","user":{"login":"caixu0518","id":33691227,"node_id":"MDQ6VXNlcjMzNjkxMjI3","avatar_url":"https://avatars1.githubusercontent.com/u/33691227?v=4","gravatar_id":"","url":"https://api.github.com/users/caixu0518","html_url":"https://github.com/caixu0518","followers_url":"https://api.github.com/users/caixu0518/followers","following_url":"https://api.github.com/users/caixu0518/following{/other_user}","gists_url":"https://api.github.com/users/caixu0518/gists{/gist_id}","starred_url":"https://api.github.com/users/caixu0518/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/caixu0518/subscriptions","organizations_url":"https://api.github.com/users/caixu0518/orgs","repos_url":"https://api.github.com/users/caixu0518/repos","events_url":"https://api.github.com/users/caixu0518/events{/privacy}","received_events_url":"https://api.github.com/users/caixu0518/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-06-05T01:04:10Z","updated_at":"2018-06-05T01:04:10Z","closed_at":null,"author_association":"NONE","body":"Recently, I used 3D-DNA and JuicerBox to anchor scaffolds to chromosomes, and got satisfactory results. However, I encountered a problem with coordinate updating and I hope to get your help.\r\n\r\nI already have gene coordinates on scaffolds, and I wanted to update gene coordinates from scaffolds to chromosomes. but I don't know how to extracted the original detail scaffolds information from the final *.hic file and *.assembly file.  I realy hope you can give me some advice. \r\n\r\nKind regards,\r\n\r\nXu Cai "}}
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