{"action":"created","comment":{"url":"https://api.github.com/repos/BioContainers/specs/pulls/comments/168453307","pull_request_review_id":96819938,"id":168453307,"diff_hunk":"@@ -7,16 +7,16 @@ We explain here the containers metadata, their meaning and use in BioContainers:\n \n \n | Field                 | Description                                                                                                                | Example                                                  |\n-|-----------------------|----------------------------------------------------------------------------------------------------------------------------|----------------------------------------------------------|\n-| base image            | The original image where the software has been built                                                                       | base image: biodckr/biodocker                            |\n-| software version      | Every BioContainer should contain the actual version of the software and tool                                              | software version: 2015020                                |\n-| software              | Name of the software                                                                                                       | software: Comet                                          |\n-| description           | A short description of the software or tool.                                                                               | description: Peptide identification search tool          |\n-| website               | The original software website where the user can find information about the tool the algorithms and examples.              | website: http://comet-ms.sourceforge.net/                |\n-| documentation         | URL(s) containing information about how to use the software.                                                               | doc pages: http://comet-ms.sourceforge.net/              |\n-| license               | SPDX license specification. If not in the SPDX list, then set short description and specify URL in license_file>                                                                                   | SPDX:Apache-2.0          |\n-| license_file          | license path location in the container or url (according to license requirements |          |  \n-| tags                  | Tags about the software that enable to find and classify the software tool.                                                | tags: proteomics, mass spectrometry, biocontainers       |\n+|-----------------------|----------------------------------------------------------------------------------------------------------------------------|------------------------------------------------------|\n+| base_image            | The original image where the software has been built | base_image: biodckr/biodocker |\n+| software.version      | Version of the software and tool                     | software.version: 2015020     |\n+| software              | Name of the software                                 | software: Comet               |\n+| about.summary         | A short description of the software or tool.         | about.summary: Peptide identification|\n+| about.home            | The original software website where  and examples.   | about.home: http://comet-ms.sourceforge.net/  |\n+| about.documentation   | URL(s) containing information about software            | aobut.documentation: http://comet-ms.sourceforge.net/     |","path":"container-specs.md","position":20,"original_position":20,"commit_id":"e08f211f4e55640a6f224edea635f26595dbc638","original_commit_id":"e08f211f4e55640a6f224edea635f26595dbc638","user":{"login":"osallou","id":1024098,"avatar_url":"https://avatars2.githubusercontent.com/u/1024098?v=4","gravatar_id":"","url":"https://api.github.com/users/osallou","html_url":"https://github.com/osallou","followers_url":"https://api.github.com/users/osallou/followers","following_url":"https://api.github.com/users/osallou/following{/other_user}","gists_url":"https://api.github.com/users/osallou/gists{/gist_id}","starred_url":"https://api.github.com/users/osallou/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/osallou/subscriptions","organizations_url":"https://api.github.com/users/osallou/orgs","repos_url":"https://api.github.com/users/osallou/repos","events_url":"https://api.github.com/users/osallou/events{/privacy}","received_events_url":"https://api.github.com/users/osallou/received_events","type":"User","site_admin":false},"body":"there is typo here (aobut)","created_at":"2018-02-15T11:52:58Z","updated_at":"2018-02-15T11:52:58Z","html_url":"https://github.com/BioContainers/specs/pull/91#discussion_r168453307","pull_request_url":"https://api.github.com/repos/BioContainers/specs/pulls/91","author_association":"CONTRIBUTOR","_links":{"self":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/comments/168453307"},"html":{"href":"https://github.com/BioContainers/specs/pull/91#discussion_r168453307"},"pull_request":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/91"}}},"pull_request":{"url":"https://api.github.com/repos/BioContainers/specs/pulls/91","id":169232920,"html_url":"https://github.com/BioContainers/specs/pull/91","diff_url":"https://github.com/BioContainers/specs/pull/91.diff","patch_url":"https://github.com/BioContainers/specs/pull/91.patch","issue_url":"https://api.github.com/repos/BioContainers/specs/issues/91","number":91,"state":"open","locked":false,"title":"Small changes in the current schema of the docker files. ","user":{"login":"ypriverol","id":52113,"avatar_url":"https://avatars1.githubusercontent.com/u/52113?v=4","gravatar_id":"","url":"https://api.github.com/users/ypriverol","html_url":"https://github.com/ypriverol","followers_url":"https://api.github.com/users/ypriverol/followers","following_url":"https://api.github.com/users/ypriverol/following{/other_user}","gists_url":"https://api.github.com/users/ypriverol/gists{/gist_id}","starred_url":"https://api.github.com/users/ypriverol/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ypriverol/subscriptions","organizations_url":"https://api.github.com/users/ypriverol/orgs","repos_url":"https://api.github.com/users/ypriverol/repos","events_url":"https://api.github.com/users/ypriverol/events{/privacy}","received_events_url":"https://api.github.com/users/ypriverol/received_events","type":"User","site_admin":false},"body":"Minor changes in the schema LABEL names to make them more consistent. Please @osallou @prvst @mr-c take a look at this PR. The basic idea here is to make standard the current names. We should consider a major redefinition of the schema for the future including the comments from @mr-c and other about been compatible with http://label-schema.org/rc1/ . I recommend to accept this PR first as small change to the schema and then move into a major changes. \r\n\r\n@mr-c I think is more important now that you check if the current entry-point for containers is fine for `cwl` and also the use of biodocker user `USER biodocker` is also fine. We also recommend the use of the working directory `WORKDIR /data/` please give us your feedback on that. ","created_at":"2018-02-14T21:56:27Z","updated_at":"2018-02-15T11:52:58Z","closed_at":null,"merged_at":null,"merge_commit_sha":"f75e2e79b629af85a964bc9bba737f2fbbb26b7a","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/BioContainers/specs/pulls/91/commits","review_comments_url":"https://api.github.com/repos/BioContainers/specs/pulls/91/comments","review_comment_url":"https://api.github.com/repos/BioContainers/specs/pulls/comments{/number}","comments_url":"https://api.github.com/repos/BioContainers/specs/issues/91/comments","statuses_url":"https://api.github.com/repos/BioContainers/specs/statuses/e08f211f4e55640a6f224edea635f26595dbc638","head":{"label":"ypriverol:master","ref":"master","sha":"e08f211f4e55640a6f224edea635f26595dbc638","user":{"login":"ypriverol","id":52113,"avatar_url":"https://avatars1.githubusercontent.com/u/52113?v=4","gravatar_id":"","url":"https://api.github.com/users/ypriverol","html_url":"https://github.com/ypriverol","followers_url":"https://api.github.com/users/ypriverol/followers","following_url":"https://api.github.com/users/ypriverol/following{/other_user}","gists_url":"https://api.github.com/users/ypriverol/gists{/gist_id}","starred_url":"https://api.github.com/users/ypriverol/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ypriverol/subscriptions","organizations_url":"https://api.github.com/users/ypriverol/orgs","repos_url":"https://api.github.com/users/ypriverol/repos","events_url":"https://api.github.com/users/ypriverol/events{/privacy}","received_events_url":"https://api.github.com/users/ypriverol/received_events","type":"User","site_admin":false},"repo":{"id":121527919,"name":"specs","full_name":"ypriverol/specs","owner":{"login":"ypriverol","id":52113,"avatar_url":"https://avatars1.githubusercontent.com/u/52113?v=4","gravatar_id":"","url":"https://api.github.com/users/ypriverol","html_url":"https://github.com/ypriverol","followers_url":"https://api.github.com/users/ypriverol/followers","following_url":"https://api.github.com/users/ypriverol/following{/other_user}","gists_url":"https://api.github.com/users/ypriverol/gists{/gist_id}","starred_url":"https://api.github.com/users/ypriverol/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ypriverol/subscriptions","organizations_url":"https://api.github.com/users/ypriverol/orgs","repos_url":"https://api.github.com/users/ypriverol/repos","events_url":"https://api.github.com/users/ypriverol/events{/privacy}","received_events_url":"https://api.github.com/users/ypriverol/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/ypriverol/specs","description":"BioContainers specifications","fork":true,"url":"https://api.github.com/repos/ypriverol/specs","forks_url":"https://api.github.com/repos/ypriverol/specs/forks","keys_url":"https://api.github.com/repos/ypriverol/specs/keys{/key_id}","collaborators_url":"https://api.github.com/repos/ypriverol/specs/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/ypriverol/specs/teams","hooks_url":"https://api.github.com/repos/ypriverol/specs/hooks","issue_events_url":"https://api.github.com/repos/ypriverol/specs/issues/events{/number}","events_url":"https://api.github.com/repos/ypriverol/specs/events","assignees_url":"https://api.github.com/repos/ypriverol/specs/assignees{/user}","branches_url":"https://api.github.com/repos/ypriverol/specs/branches{/branch}","tags_url":"https://api.github.com/repos/ypriverol/specs/tags","blobs_url":"https://api.github.com/repos/ypriverol/specs/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/ypriverol/specs/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/ypriverol/specs/git/refs{/sha}","trees_url":"https://api.github.com/repos/ypriverol/specs/git/trees{/sha}","statuses_url":"https://api.github.com/repos/ypriverol/specs/statuses/{sha}","languages_url":"https://api.github.com/repos/ypriverol/specs/languages","stargazers_url":"https://api.github.com/repos/ypriverol/specs/stargazers","contributors_url":"https://api.github.com/repos/ypriverol/specs/contributors","subscribers_url":"https://api.github.com/repos/ypriverol/specs/subscribers","subscription_url":"https://api.github.com/repos/ypriverol/specs/subscription","commits_url":"https://api.github.com/repos/ypriverol/specs/commits{/sha}","git_commits_url":"https://api.github.com/repos/ypriverol/specs/git/commits{/sha}","comments_url":"https://api.github.com/repos/ypriverol/specs/comments{/number}","issue_comment_url":"https://api.github.com/repos/ypriverol/specs/issues/comments{/number}","contents_url":"https://api.github.com/repos/ypriverol/specs/contents/{+path}","compare_url":"https://api.github.com/repos/ypriverol/specs/compare/{base}...{head}","merges_url":"https://api.github.com/repos/ypriverol/specs/merges","archive_url":"https://api.github.com/repos/ypriverol/specs/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/ypriverol/specs/downloads","issues_url":"https://api.github.com/repos/ypriverol/specs/issues{/number}","pulls_url":"https://api.github.com/repos/ypriverol/specs/pulls{/number}","milestones_url":"https://api.github.com/repos/ypriverol/specs/milestones{/number}","notifications_url":"https://api.github.com/repos/ypriverol/specs/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/ypriverol/specs/labels{/name}","releases_url":"https://api.github.com/repos/ypriverol/specs/releases{/id}","deployments_url":"https://api.github.com/repos/ypriverol/specs/deployments","created_at":"2018-02-14T15:40:29Z","updated_at":"2018-02-14T12:56:26Z","pushed_at":"2018-02-15T10:13:01Z","git_url":"git://github.com/ypriverol/specs.git","ssh_url":"git@github.com:ypriverol/specs.git","clone_url":"https://github.com/ypriverol/specs.git","svn_url":"https://github.com/ypriverol/specs","homepage":"http://biocontainers.pro","size":469,"stargazers_count":0,"watchers_count":0,"language":null,"has_issues":false,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":0,"license":null,"forks":0,"open_issues":0,"watchers":0,"default_branch":"master"}},"base":{"label":"BioContainers:master","ref":"master","sha":"816f7c40b84019946bd7f110ec5bbc8c43485b87","user":{"login":"BioContainers","id":8040690,"avatar_url":"https://avatars0.githubusercontent.com/u/8040690?v=4","gravatar_id":"","url":"https://api.github.com/users/BioContainers","html_url":"https://github.com/BioContainers","followers_url":"https://api.github.com/users/BioContainers/followers","following_url":"https://api.github.com/users/BioContainers/following{/other_user}","gists_url":"https://api.github.com/users/BioContainers/gists{/gist_id}","starred_url":"https://api.github.com/users/BioContainers/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/BioContainers/subscriptions","organizations_url":"https://api.github.com/users/BioContainers/orgs","repos_url":"https://api.github.com/users/BioContainers/repos","events_url":"https://api.github.com/users/BioContainers/events{/privacy}","received_events_url":"https://api.github.com/users/BioContainers/received_events","type":"Organization","site_admin":false},"repo":{"id":40150871,"name":"specs","full_name":"BioContainers/specs","owner":{"login":"BioContainers","id":8040690,"avatar_url":"https://avatars0.githubusercontent.com/u/8040690?v=4","gravatar_id":"","url":"https://api.github.com/users/BioContainers","html_url":"https://github.com/BioContainers","followers_url":"https://api.github.com/users/BioContainers/followers","following_url":"https://api.github.com/users/BioContainers/following{/other_user}","gists_url":"https://api.github.com/users/BioContainers/gists{/gist_id}","starred_url":"https://api.github.com/users/BioContainers/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/BioContainers/subscriptions","organizations_url":"https://api.github.com/users/BioContainers/orgs","repos_url":"https://api.github.com/users/BioContainers/repos","events_url":"https://api.github.com/users/BioContainers/events{/privacy}","received_events_url":"https://api.github.com/users/BioContainers/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/BioContainers/specs","description":"BioContainers specifications","fork":false,"url":"https://api.github.com/repos/BioContainers/specs","forks_url":"https://api.github.com/repos/BioContainers/specs/forks","keys_url":"https://api.github.com/repos/BioContainers/specs/keys{/key_id}","collaborators_url":"https://api.github.com/repos/BioContainers/specs/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/BioContainers/specs/teams","hooks_url":"https://api.github.com/repos/BioContainers/specs/hooks","issue_events_url":"https://api.github.com/repos/BioContainers/specs/issues/events{/number}","events_url":"https://api.github.com/repos/BioContainers/specs/events","assignees_url":"https://api.github.com/repos/BioContainers/specs/assignees{/user}","branches_url":"https://api.github.com/repos/BioContainers/specs/branches{/branch}","tags_url":"https://api.github.com/repos/BioContainers/specs/tags","blobs_url":"https://api.github.com/repos/BioContainers/specs/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/BioContainers/specs/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/BioContainers/specs/git/refs{/sha}","trees_url":"https://api.github.com/repos/BioContainers/specs/git/trees{/sha}","statuses_url":"https://api.github.com/repos/BioContainers/specs/statuses/{sha}","languages_url":"https://api.github.com/repos/BioContainers/specs/languages","stargazers_url":"https://api.github.com/repos/BioContainers/specs/stargazers","contributors_url":"https://api.github.com/repos/BioContainers/specs/contributors","subscribers_url":"https://api.github.com/repos/BioContainers/specs/subscribers","subscription_url":"https://api.github.com/repos/BioContainers/specs/subscription","commits_url":"https://api.github.com/repos/BioContainers/specs/commits{/sha}","git_commits_url":"https://api.github.com/repos/BioContainers/specs/git/commits{/sha}","comments_url":"https://api.github.com/repos/BioContainers/specs/comments{/number}","issue_comment_url":"https://api.github.com/repos/BioContainers/specs/issues/comments{/number}","contents_url":"https://api.github.com/repos/BioContainers/specs/contents/{+path}","compare_url":"https://api.github.com/repos/BioContainers/specs/compare/{base}...{head}","merges_url":"https://api.github.com/repos/BioContainers/specs/merges","archive_url":"https://api.github.com/repos/BioContainers/specs/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/BioContainers/specs/downloads","issues_url":"https://api.github.com/repos/BioContainers/specs/issues{/number}","pulls_url":"https://api.github.com/repos/BioContainers/specs/pulls{/number}","milestones_url":"https://api.github.com/repos/BioContainers/specs/milestones{/number}","notifications_url":"https://api.github.com/repos/BioContainers/specs/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/BioContainers/specs/labels{/name}","releases_url":"https://api.github.com/repos/BioContainers/specs/releases{/id}","deployments_url":"https://api.github.com/repos/BioContainers/specs/deployments","created_at":"2015-08-03T22:25:17Z","updated_at":"2018-02-14T22:52:41Z","pushed_at":"2018-02-15T10:13:02Z","git_url":"git://github.com/BioContainers/specs.git","ssh_url":"git@github.com:BioContainers/specs.git","clone_url":"https://github.com/BioContainers/specs.git","svn_url":"https://github.com/BioContainers/specs","homepage":"http://biocontainers.pro","size":459,"stargazers_count":32,"watchers_count":32,"language":null,"has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":11,"mirror_url":null,"archived":false,"open_issues_count":8,"license":{"key":"apache-2.0","name":"Apache License 2.0","spdx_id":"Apache-2.0","url":"https://api.github.com/licenses/apache-2.0"},"forks":11,"open_issues":8,"watchers":32,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/91"},"html":{"href":"https://github.com/BioContainers/specs/pull/91"},"issue":{"href":"https://api.github.com/repos/BioContainers/specs/issues/91"},"comments":{"href":"https://api.github.com/repos/BioContainers/specs/issues/91/comments"},"review_comments":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/91/comments"},"review_comment":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/BioContainers/specs/pulls/91/commits"},"statuses":{"href":"https://api.github.com/repos/BioContainers/specs/statuses/e08f211f4e55640a6f224edea635f26595dbc638"}},"author_association":"OWNER"}}
{"actor":{"display_login":"osallou"}}