{"action":"created","issue":{"url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/112","repository_url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM","labels_url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/112/labels{/name}","comments_url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/112/comments","events_url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/112/events","html_url":"https://github.com/SysBioChalmers/yeast-GEM/pull/112","id":324728276,"number":112,"title":"Feat/SLIME 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Main improvements in this PR:\r\nThis PR addresses #21 with a novel way for constraining lipid metabolism (see [SysBioChalmers/SLIMEr](https://github.com/SysBioChalmers/SLIMEr)):\r\n* SLIME rxns replace old ISA rxns for lumping lipids.\r\n* There are now 3 lipid pseudoreactions: 1 constrains backbones, 1 constrains acyl chains, 1 merges both.\r\n* Biomass composition was rescaled to experimental data from [Lahtvee et al. 2017](https://www.sciencedirect.com/science/article/pii/S2405471217300881). \r\n\r\n**I hereby confirm that I have:**\r\n\r\n- [X] Tested my code with [all requirements](https://github.com/SysBioChalmers/yeast-GEM#required-software---contributor) for running the model\r\n- [X] Selected `devel` as a target branch (top left drop-down menu)\r\n- [X] If needed, asked first in the [Gitter chat room](https://gitter.im/SysBioChalmers/yeast-GEM) about this PR\r\n"},"comment":{"url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/comments/391992332","html_url":"https://github.com/SysBioChalmers/yeast-GEM/pull/112#issuecomment-391992332","issue_url":"https://api.github.com/repos/SysBioChalmers/yeast-GEM/issues/112","id":391992332,"user":{"login":"edkerk","id":7326655,"avatar_url":"https://avatars3.githubusercontent.com/u/7326655?v=4","gravatar_id":"","url":"https://api.github.com/users/edkerk","html_url":"https://github.com/edkerk","followers_url":"https://api.github.com/users/edkerk/followers","following_url":"https://api.github.com/users/edkerk/following{/other_user}","gists_url":"https://api.github.com/users/edkerk/gists{/gist_id}","starred_url":"https://api.github.com/users/edkerk/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/edkerk/subscriptions","organizations_url":"https://api.github.com/users/edkerk/orgs","repos_url":"https://api.github.com/users/edkerk/repos","events_url":"https://api.github.com/users/edkerk/events{/privacy}","received_events_url":"https://api.github.com/users/edkerk/received_events","type":"User","site_admin":false},"created_at":"2018-05-25T09:11:58Z","updated_at":"2018-05-25T09:11:58Z","author_association":"NONE","body":"It's unclear to me how you defined the chemical formulae of the pseudo metabolites. Could you show for instance why `triglyceride` has chemical formula `C3H2`?"}}
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