{"action":"opened","issue":{"url":"https://api.github.com/repos/tseemann/ekidna/issues/8","repository_url":"https://api.github.com/repos/tseemann/ekidna","labels_url":"https://api.github.com/repos/tseemann/ekidna/issues/8/labels{/name}","comments_url":"https://api.github.com/repos/tseemann/ekidna/issues/8/comments","events_url":"https://api.github.com/repos/tseemann/ekidna/issues/8/events","html_url":"https://github.com/tseemann/ekidna/issues/8","id":371883310,"node_id":"MDU6SXNzdWUzNzE4ODMzMTA=","number":8,"title":"Output names are just sequential integers","user":{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false},"labels":[{"id":1092491549,"node_id":"MDU6TGFiZWwxMDkyNDkxNTQ5","url":"https://api.github.com/repos/tseemann/ekidna/labels/bug","name":"bug","color":"d73a4a","default":true}],"state":"open","locked":false,"assignee":{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false},"assignees":[{"login":"tseemann","id":453972,"node_id":"MDQ6VXNlcjQ1Mzk3Mg==","avatar_url":"https://avatars2.githubusercontent.com/u/453972?v=4","gravatar_id":"","url":"https://api.github.com/users/tseemann","html_url":"https://github.com/tseemann","followers_url":"https://api.github.com/users/tseemann/followers","following_url":"https://api.github.com/users/tseemann/following{/other_user}","gists_url":"https://api.github.com/users/tseemann/gists{/gist_id}","starred_url":"https://api.github.com/users/tseemann/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/tseemann/subscriptions","organizations_url":"https://api.github.com/users/tseemann/orgs","repos_url":"https://api.github.com/users/tseemann/repos","events_url":"https://api.github.com/users/tseemann/events{/privacy}","received_events_url":"https://api.github.com/users/tseemann/received_events","type":"User","site_admin":false}],"milestone":null,"comments":0,"created_at":"2018-10-19T09:45:16Z","updated_at":"2018-10-19T09:45:16Z","closed_at":null,"author_association":"OWNER","body":"Need to map sample names to input files somehow.\r\n\r\nCould use filename, but if it is just `SAMPLE/contigs.fa` will need folder name too\r\n\r\nmaybe accept `-i sample_list.tab` which has `<filename> \\t <label>` and use labels (like ARIBA).\r\n"}}
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