{"action":"created","comment":{"url":"https://api.github.com/repos/biolink/biolink-api/pulls/comments/181874365","pull_request_review_id":112575289,"id":181874365,"diff_hunk":"@@ -47,7 +48,6 @@ def get(self, category):\n         results = map2slim(subjects=prots,\n                            slim=slim,\n                            rows=200,\n-                           exclude_automatic_assertions=True,","path":"biolink/api/entityset/endpoints/slimmer.py","position":12,"original_position":12,"commit_id":"f9ee9930782b34d4ddd85ca980b0e9eef077b487","original_commit_id":"f9ee9930782b34d4ddd85ca980b0e9eef077b487","user":{"login":"nathandunn","id":751274,"avatar_url":"https://avatars2.githubusercontent.com/u/751274?v=4","gravatar_id":"","url":"https://api.github.com/users/nathandunn","html_url":"https://github.com/nathandunn","followers_url":"https://api.github.com/users/nathandunn/followers","following_url":"https://api.github.com/users/nathandunn/following{/other_user}","gists_url":"https://api.github.com/users/nathandunn/gists{/gist_id}","starred_url":"https://api.github.com/users/nathandunn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nathandunn/subscriptions","organizations_url":"https://api.github.com/users/nathandunn/orgs","repos_url":"https://api.github.com/users/nathandunn/repos","events_url":"https://api.github.com/users/nathandunn/events{/privacy}","received_events_url":"https://api.github.com/users/nathandunn/received_events","type":"User","site_admin":false},"body":"per the call, should be `=False` but otherwise looks great.","created_at":"2018-04-16T20:27:26Z","updated_at":"2018-04-16T20:28:05Z","html_url":"https://github.com/biolink/biolink-api/pull/167#discussion_r181874365","pull_request_url":"https://api.github.com/repos/biolink/biolink-api/pulls/167","author_association":"CONTRIBUTOR","_links":{"self":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/comments/181874365"},"html":{"href":"https://github.com/biolink/biolink-api/pull/167#discussion_r181874365"},"pull_request":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/167"}}},"pull_request":{"url":"https://api.github.com/repos/biolink/biolink-api/pulls/167","id":181972659,"html_url":"https://github.com/biolink/biolink-api/pull/167","diff_url":"https://github.com/biolink/biolink-api/pull/167.diff","patch_url":"https://github.com/biolink/biolink-api/pull/167.patch","issue_url":"https://api.github.com/repos/biolink/biolink-api/issues/167","number":167,"state":"open","locked":false,"title":"add exclude_automatic_assertions parameter to bioentityset/slimmer/","user":{"login":"deepakunni3","id":4530272,"avatar_url":"https://avatars1.githubusercontent.com/u/4530272?v=4","gravatar_id":"","url":"https://api.github.com/users/deepakunni3","html_url":"https://github.com/deepakunni3","followers_url":"https://api.github.com/users/deepakunni3/followers","following_url":"https://api.github.com/users/deepakunni3/following{/other_user}","gists_url":"https://api.github.com/users/deepakunni3/gists{/gist_id}","starred_url":"https://api.github.com/users/deepakunni3/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/deepakunni3/subscriptions","organizations_url":"https://api.github.com/users/deepakunni3/orgs","repos_url":"https://api.github.com/users/deepakunni3/repos","events_url":"https://api.github.com/users/deepakunni3/events{/privacy}","received_events_url":"https://api.github.com/users/deepakunni3/received_events","type":"User","site_admin":false},"body":"@nathandunn FYI\r\n\r\nQuery to test with:\r\n```\r\nhttps://api.monarchinitiative.org/api/bioentityset/slimmer/function?&slim=GO:0003824&slim=GO:0004872&slim=GO:0005102&slim=GO:0005215&slim=GO:0005198&slim=GO:0008092&slim=GO:0003677&slim=GO:0003723&slim=GO:0001071&slim=GO:0036094&slim=GO:0046872&slim=GO:0030246&slim=GO:0003674&slim=GO:0008283&slim=GO:0071840&slim=GO:0051179&slim=GO:0032502&slim=GO:0000003&slim=GO:0002376&slim=GO:0050877&slim=GO:0050896&slim=GO:0023052&slim=GO:0010467&slim=GO:0019538&slim=GO:0006259&slim=GO:0044281&slim=GO:0050789&slim=GO:0042592&slim=GO:0007610&slim=GO:0008150&slim=GO:0005576&slim=GO:0005737&slim=GO:0005856&slim=GO:0005739&slim=GO:0005634&slim=GO:0005694&slim=GO:0016020&slim=GO:0031982&slim=GO:0071944&slim=GO:0030054&slim=GO:0042995&slim=GO:0032991&slim=GO:0045202&slim=GO:0005575&subject=ZFIN:ZDB-GENE-000823-4\r\n```\r\n\r\nWill wait for our GOlr to come back online before testing.","created_at":"2018-04-16T20:02:15Z","updated_at":"2018-04-16T20:28:05Z","closed_at":null,"merged_at":null,"merge_commit_sha":"dcfdce8b7656e3ed6a3d2ee7c3b678a6bf2d3599","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/biolink/biolink-api/pulls/167/commits","review_comments_url":"https://api.github.com/repos/biolink/biolink-api/pulls/167/comments","review_comment_url":"https://api.github.com/repos/biolink/biolink-api/pulls/comments{/number}","comments_url":"https://api.github.com/repos/biolink/biolink-api/issues/167/comments","statuses_url":"https://api.github.com/repos/biolink/biolink-api/statuses/f9ee9930782b34d4ddd85ca980b0e9eef077b487","head":{"label":"deepakunni3:issue-166","ref":"issue-166","sha":"f9ee9930782b34d4ddd85ca980b0e9eef077b487","user":{"login":"deepakunni3","id":4530272,"avatar_url":"https://avatars1.githubusercontent.com/u/4530272?v=4","gravatar_id":"","url":"https://api.github.com/users/deepakunni3","html_url":"https://github.com/deepakunni3","followers_url":"https://api.github.com/users/deepakunni3/followers","following_url":"https://api.github.com/users/deepakunni3/following{/other_user}","gists_url":"https://api.github.com/users/deepakunni3/gists{/gist_id}","starred_url":"https://api.github.com/users/deepakunni3/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/deepakunni3/subscriptions","organizations_url":"https://api.github.com/users/deepakunni3/orgs","repos_url":"https://api.github.com/users/deepakunni3/repos","events_url":"https://api.github.com/users/deepakunni3/events{/privacy}","received_events_url":"https://api.github.com/users/deepakunni3/received_events","type":"User","site_admin":false},"repo":{"id":121461798,"name":"biolink-api","full_name":"deepakunni3/biolink-api","owner":{"login":"deepakunni3","id":4530272,"avatar_url":"https://avatars1.githubusercontent.com/u/4530272?v=4","gravatar_id":"","url":"https://api.github.com/users/deepakunni3","html_url":"https://github.com/deepakunni3","followers_url":"https://api.github.com/users/deepakunni3/followers","following_url":"https://api.github.com/users/deepakunni3/following{/other_user}","gists_url":"https://api.github.com/users/deepakunni3/gists{/gist_id}","starred_url":"https://api.github.com/users/deepakunni3/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/deepakunni3/subscriptions","organizations_url":"https://api.github.com/users/deepakunni3/orgs","repos_url":"https://api.github.com/users/deepakunni3/repos","events_url":"https://api.github.com/users/deepakunni3/events{/privacy}","received_events_url":"https://api.github.com/users/deepakunni3/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/deepakunni3/biolink-api","description":"API for linked biological knowledge","fork":true,"url":"https://api.github.com/repos/deepakunni3/biolink-api","forks_url":"https://api.github.com/repos/deepakunni3/biolink-api/forks","keys_url":"https://api.github.com/repos/deepakunni3/biolink-api/keys{/key_id}","collaborators_url":"https://api.github.com/repos/deepakunni3/biolink-api/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/deepakunni3/biolink-api/teams","hooks_url":"https://api.github.com/repos/deepakunni3/biolink-api/hooks","issue_events_url":"https://api.github.com/repos/deepakunni3/biolink-api/issues/events{/number}","events_url":"https://api.github.com/repos/deepakunni3/biolink-api/events","assignees_url":"https://api.github.com/repos/deepakunni3/biolink-api/assignees{/user}","branches_url":"https://api.github.com/repos/deepakunni3/biolink-api/branches{/branch}","tags_url":"https://api.github.com/repos/deepakunni3/biolink-api/tags","blobs_url":"https://api.github.com/repos/deepakunni3/biolink-api/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/deepakunni3/biolink-api/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/deepakunni3/biolink-api/git/refs{/sha}","trees_url":"https://api.github.com/repos/deepakunni3/biolink-api/git/trees{/sha}","statuses_url":"https://api.github.com/repos/deepakunni3/biolink-api/statuses/{sha}","languages_url":"https://api.github.com/repos/deepakunni3/biolink-api/languages","stargazers_url":"https://api.github.com/repos/deepakunni3/biolink-api/stargazers","contributors_url":"https://api.github.com/repos/deepakunni3/biolink-api/contributors","subscribers_url":"https://api.github.com/repos/deepakunni3/biolink-api/subscribers","subscription_url":"https://api.github.com/repos/deepakunni3/biolink-api/subscription","commits_url":"https://api.github.com/repos/deepakunni3/biolink-api/commits{/sha}","git_commits_url":"https://api.github.com/repos/deepakunni3/biolink-api/git/commits{/sha}","comments_url":"https://api.github.com/repos/deepakunni3/biolink-api/comments{/number}","issue_comment_url":"https://api.github.com/repos/deepakunni3/biolink-api/issues/comments{/number}","contents_url":"https://api.github.com/repos/deepakunni3/biolink-api/contents/{+path}","compare_url":"https://api.github.com/repos/deepakunni3/biolink-api/compare/{base}...{head}","merges_url":"https://api.github.com/repos/deepakunni3/biolink-api/merges","archive_url":"https://api.github.com/repos/deepakunni3/biolink-api/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/deepakunni3/biolink-api/downloads","issues_url":"https://api.github.com/repos/deepakunni3/biolink-api/issues{/number}","pulls_url":"https://api.github.com/repos/deepakunni3/biolink-api/pulls{/number}","milestones_url":"https://api.github.com/repos/deepakunni3/biolink-api/milestones{/number}","notifications_url":"https://api.github.com/repos/deepakunni3/biolink-api/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/deepakunni3/biolink-api/labels{/name}","releases_url":"https://api.github.com/repos/deepakunni3/biolink-api/releases{/id}","deployments_url":"https://api.github.com/repos/deepakunni3/biolink-api/deployments","created_at":"2018-02-14T02:24:40Z","updated_at":"2018-03-28T20:19:23Z","pushed_at":"2018-04-16T20:01:06Z","git_url":"git://github.com/deepakunni3/biolink-api.git","ssh_url":"git@github.com:deepakunni3/biolink-api.git","clone_url":"https://github.com/deepakunni3/biolink-api.git","svn_url":"https://github.com/deepakunni3/biolink-api","homepage":"http://api.monarchinitiative.org/api/","size":851,"stargazers_count":0,"watchers_count":0,"language":"Python","has_issues":false,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":0,"license":null,"forks":0,"open_issues":0,"watchers":0,"default_branch":"master"}},"base":{"label":"biolink:master","ref":"master","sha":"39b378db440e9f666c2fb518cd8fde3e68bacb39","user":{"login":"biolink","id":25489141,"avatar_url":"https://avatars2.githubusercontent.com/u/25489141?v=4","gravatar_id":"","url":"https://api.github.com/users/biolink","html_url":"https://github.com/biolink","followers_url":"https://api.github.com/users/biolink/followers","following_url":"https://api.github.com/users/biolink/following{/other_user}","gists_url":"https://api.github.com/users/biolink/gists{/gist_id}","starred_url":"https://api.github.com/users/biolink/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/biolink/subscriptions","organizations_url":"https://api.github.com/users/biolink/orgs","repos_url":"https://api.github.com/users/biolink/repos","events_url":"https://api.github.com/users/biolink/events{/privacy}","received_events_url":"https://api.github.com/users/biolink/received_events","type":"Organization","site_admin":false},"repo":{"id":76697473,"name":"biolink-api","full_name":"biolink/biolink-api","owner":{"login":"biolink","id":25489141,"avatar_url":"https://avatars2.githubusercontent.com/u/25489141?v=4","gravatar_id":"","url":"https://api.github.com/users/biolink","html_url":"https://github.com/biolink","followers_url":"https://api.github.com/users/biolink/followers","following_url":"https://api.github.com/users/biolink/following{/other_user}","gists_url":"https://api.github.com/users/biolink/gists{/gist_id}","starred_url":"https://api.github.com/users/biolink/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/biolink/subscriptions","organizations_url":"https://api.github.com/users/biolink/orgs","repos_url":"https://api.github.com/users/biolink/repos","events_url":"https://api.github.com/users/biolink/events{/privacy}","received_events_url":"https://api.github.com/users/biolink/received_events","type":"Organization","site_admin":false},"private":false,"html_url":"https://github.com/biolink/biolink-api","description":"API for linked biological knowledge","fork":false,"url":"https://api.github.com/repos/biolink/biolink-api","forks_url":"https://api.github.com/repos/biolink/biolink-api/forks","keys_url":"https://api.github.com/repos/biolink/biolink-api/keys{/key_id}","collaborators_url":"https://api.github.com/repos/biolink/biolink-api/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/biolink/biolink-api/teams","hooks_url":"https://api.github.com/repos/biolink/biolink-api/hooks","issue_events_url":"https://api.github.com/repos/biolink/biolink-api/issues/events{/number}","events_url":"https://api.github.com/repos/biolink/biolink-api/events","assignees_url":"https://api.github.com/repos/biolink/biolink-api/assignees{/user}","branches_url":"https://api.github.com/repos/biolink/biolink-api/branches{/branch}","tags_url":"https://api.github.com/repos/biolink/biolink-api/tags","blobs_url":"https://api.github.com/repos/biolink/biolink-api/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/biolink/biolink-api/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/biolink/biolink-api/git/refs{/sha}","trees_url":"https://api.github.com/repos/biolink/biolink-api/git/trees{/sha}","statuses_url":"https://api.github.com/repos/biolink/biolink-api/statuses/{sha}","languages_url":"https://api.github.com/repos/biolink/biolink-api/languages","stargazers_url":"https://api.github.com/repos/biolink/biolink-api/stargazers","contributors_url":"https://api.github.com/repos/biolink/biolink-api/contributors","subscribers_url":"https://api.github.com/repos/biolink/biolink-api/subscribers","subscription_url":"https://api.github.com/repos/biolink/biolink-api/subscription","commits_url":"https://api.github.com/repos/biolink/biolink-api/commits{/sha}","git_commits_url":"https://api.github.com/repos/biolink/biolink-api/git/commits{/sha}","comments_url":"https://api.github.com/repos/biolink/biolink-api/comments{/number}","issue_comment_url":"https://api.github.com/repos/biolink/biolink-api/issues/comments{/number}","contents_url":"https://api.github.com/repos/biolink/biolink-api/contents/{+path}","compare_url":"https://api.github.com/repos/biolink/biolink-api/compare/{base}...{head}","merges_url":"https://api.github.com/repos/biolink/biolink-api/merges","archive_url":"https://api.github.com/repos/biolink/biolink-api/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/biolink/biolink-api/downloads","issues_url":"https://api.github.com/repos/biolink/biolink-api/issues{/number}","pulls_url":"https://api.github.com/repos/biolink/biolink-api/pulls{/number}","milestones_url":"https://api.github.com/repos/biolink/biolink-api/milestones{/number}","notifications_url":"https://api.github.com/repos/biolink/biolink-api/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/biolink/biolink-api/labels{/name}","releases_url":"https://api.github.com/repos/biolink/biolink-api/releases{/id}","deployments_url":"https://api.github.com/repos/biolink/biolink-api/deployments","created_at":"2016-12-17T01:42:34Z","updated_at":"2018-03-28T19:49:57Z","pushed_at":"2018-04-16T20:02:16Z","git_url":"git://github.com/biolink/biolink-api.git","ssh_url":"git@github.com:biolink/biolink-api.git","clone_url":"https://github.com/biolink/biolink-api.git","svn_url":"https://github.com/biolink/biolink-api","homepage":"http://api.monarchinitiative.org/api/","size":848,"stargazers_count":8,"watchers_count":8,"language":"Python","has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":12,"mirror_url":null,"archived":false,"open_issues_count":80,"license":null,"forks":12,"open_issues":80,"watchers":8,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/167"},"html":{"href":"https://github.com/biolink/biolink-api/pull/167"},"issue":{"href":"https://api.github.com/repos/biolink/biolink-api/issues/167"},"comments":{"href":"https://api.github.com/repos/biolink/biolink-api/issues/167/comments"},"review_comments":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/167/comments"},"review_comment":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/biolink/biolink-api/pulls/167/commits"},"statuses":{"href":"https://api.github.com/repos/biolink/biolink-api/statuses/f9ee9930782b34d4ddd85ca980b0e9eef077b487"}},"author_association":"CONTRIBUTOR"}}
{"actor":{"display_login":"nathandunn"}}