{"action":"created","issue":{"url":"https://api.github.com/repos/StrikeNP/trac_test/issues/514","repository_url":"https://api.github.com/repos/StrikeNP/trac_test","labels_url":"https://api.github.com/repos/StrikeNP/trac_test/issues/514/labels{/name}","comments_url":"https://api.github.com/repos/StrikeNP/trac_test/issues/514/comments","events_url":"https://api.github.com/repos/StrikeNP/trac_test/issues/514/events","html_url":"https://github.com/StrikeNP/trac_test/issues/514","id":330448149,"node_id":"MDU6SXNzdWUzMzA0NDgxNDk=","number":514,"title":"Implement diagnosis of correlations in CLUBB with later comments on: the KK code refactoring, the creation of the setup_pdf_parameters code and convergence of SILHS to KK (Trac #514)","user":{"login":"StrikeNP","id":2577059,"node_id":"MDQ6VXNlcjI1NzcwNTk=","avatar_url":"https://avatars0.githubusercontent.com/u/2577059?v=4","gravatar_id":"","url":"https://api.github.com/users/StrikeNP","html_url":"https://github.com/StrikeNP","followers_url":"https://api.github.com/users/StrikeNP/followers","following_url":"https://api.github.com/users/StrikeNP/following{/other_user}","gists_url":"https://api.github.com/users/StrikeNP/gists{/gist_id}","starred_url":"https://api.github.com/users/StrikeNP/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/StrikeNP/subscriptions","organizations_url":"https://api.github.com/users/StrikeNP/orgs","repos_url":"https://api.github.com/users/StrikeNP/repos","events_url":"https://api.github.com/users/StrikeNP/events{/privacy}","received_events_url":"https://api.github.com/users/StrikeNP/received_events","type":"User","site_admin":false},"labels":[{"id":958019852,"node_id":"MDU6TGFiZWw5NTgwMTk4NTI=","url":"https://api.github.com/repos/StrikeNP/trac_test/labels/Migrated%20from%20Trac","name":"Migrated from Trac","color":"FFFFFF","default":false},{"id":958042830,"node_id":"MDU6TGFiZWw5NTgwNDI4MzA=","url":"https://api.github.com/repos/StrikeNP/trac_test/labels/clubb_src","name":"clubb_src","color":"FFFFFF","default":false},{"id":958123000,"node_id":"MDU6TGFiZWw5NTgxMjMwMDA=","url":"https://api.github.com/repos/StrikeNP/trac_test/labels/janhft@uwm.edu","name":"janhft@uwm.edu","color":"FFFFFF","default":false},{"id":958042692,"node_id":"MDU6TGFiZWw5NTgwNDI2OTI=","url":"https://api.github.com/repos/StrikeNP/trac_test/labels/task","name":"task","color":"FFFFFF","default":false}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":{"url":"https://api.github.com/repos/StrikeNP/trac_test/milestones/22","html_url":"https://github.com/StrikeNP/trac_test/milestone/22","labels_url":"https://api.github.com/repos/StrikeNP/trac_test/milestones/22/labels","id":3409159,"node_id":"MDk6TWlsZXN0b25lMzQwOTE1OQ==","number":22,"title":"Diagnose correlations in CLUBB","description":null,"creator":{"login":"StrikeNP","id":2577059,"node_id":"MDQ6VXNlcjI1NzcwNTk=","avatar_url":"https://avatars0.githubusercontent.com/u/2577059?v=4","gravatar_id":"","url":"https://api.github.com/users/StrikeNP","html_url":"https://github.com/StrikeNP","followers_url":"https://api.github.com/users/StrikeNP/followers","following_url":"https://api.github.com/users/StrikeNP/following{/other_user}","gists_url":"https://api.github.com/users/StrikeNP/gists{/gist_id}","starred_url":"https://api.github.com/users/StrikeNP/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/StrikeNP/subscriptions","organizations_url":"https://api.github.com/users/StrikeNP/orgs","repos_url":"https://api.github.com/users/StrikeNP/repos","events_url":"https://api.github.com/users/StrikeNP/events{/privacy}","received_events_url":"https://api.github.com/users/StrikeNP/received_events","type":"User","site_admin":false},"open_issues":4,"closed_issues":0,"state":"open","created_at":"2018-06-07T21:49:09Z","updated_at":"2018-06-07T23:12:21Z","due_on":null,"closed_at":null},"comments":128,"created_at":"2018-06-07T21:49:12Z","updated_at":"2018-06-09T07:35:57Z","closed_at":null,"author_association":"OWNER","body":"\nRight now, both the analytic KK microphysics and the SILHS code used prescribed correlation arrays.  Rather, we'd like to diagnose these using the algorithm in Larson et al. (2011).  Let's implement this algorithm in CLUBB.\n\nLet's think of a test matrix on which to test the new code.\n\nAttachments:\n\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/larson_et_al_2011_correlations.pdf\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/PDF_comp_multivariateNL.png\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/corr_rrNr_n-t25.png\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/corr_rrNr_n_fij_wo_sign.png\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/corr_rrNr_n_Sij_1.png\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/corr_rrNr_n_Sij_1_fij_with_sign.png\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_120312.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/dycoms2_rf02_ds.case\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/rico.case\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_local.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_system.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_combined.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_wcorr_fixed_01.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_wcorr_fixed_05_1.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgenout_wcorr_fixed_mixed.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_fij_changed.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_fij_changed3.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_fij2.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_comp3_05.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_comp4_05.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/po_compare2_calc.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/diagnose_corr_status_quo.pdf\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/corr_compare_05.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/diagnose_corr_planned.pdf\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/compare_r6297_r6298fixed.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/compare_r6297_r6299_current3.maff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/diagnose_corr_20130610.pdf\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/plotgen_diag_vs_pre\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/diagnose_corr_20130702.pdf\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/r6470.diff\nhttp://carson.math.uwm.edu/trac/clubb/attachment/ticket/514/r6470_new_1.maff\n\nMigrated from http://carson.math.uwm.edu/trac/clubb/ticket/514\n```json\n{\n    \"status\": \"closed\", \n    \"changetime\": \"2013-09-30T21:38:35\", \n    \"description\": \"\\nRight now, both the analytic KK microphysics and the SILHS code used prescribed correlation arrays.  Rather, we'd like to diagnose these using the algorithm in Larson et al. (2011).  Let's implement this algorithm in CLUBB.\\n\\nLet's think of a test matrix on which to test the new code.\", \n    \"reporter\": \"vlarson@uwm.edu\", \n    \"cc\": \"vlarson@uwm.edu, dschanen@uwm.edu, bmg2@uwm.edu, raut@uwm.edu\", \n    \"resolution\": \"invalid\", \n    \"_ts\": \"1380577115624609\", \n    \"component\": \"clubb_src\", \n    \"summary\": \"Implement diagnosis of correlations in CLUBB with later comments on: the KK code refactoring, the creation of the setup_pdf_parameters code and convergence of SILHS to KK\", \n    \"priority\": \"major\", \n    \"keywords\": \"\", \n    \"time\": \"2012-07-16T20:12:36\", \n    \"milestone\": \"Diagnose correlations in CLUBB\", \n    \"owner\": \"janhft@uwm.edu\", \n    \"type\": \"task\"\n}\n```\n"},"comment":{"url":"https://api.github.com/repos/StrikeNP/trac_test/issues/comments/395948069","html_url":"https://github.com/StrikeNP/trac_test/issues/514#issuecomment-395948069","issue_url":"https://api.github.com/repos/StrikeNP/trac_test/issues/514","id":395948069,"node_id":"MDEyOklzc3VlQ29tbWVudDM5NTk0ODA2OQ==","user":{"login":"StrikeNP","id":2577059,"node_id":"MDQ6VXNlcjI1NzcwNTk=","avatar_url":"https://avatars0.githubusercontent.com/u/2577059?v=4","gravatar_id":"","url":"https://api.github.com/users/StrikeNP","html_url":"https://github.com/StrikeNP","followers_url":"https://api.github.com/users/StrikeNP/followers","following_url":"https://api.github.com/users/StrikeNP/following{/other_user}","gists_url":"https://api.github.com/users/StrikeNP/gists{/gist_id}","starred_url":"https://api.github.com/users/StrikeNP/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/StrikeNP/subscriptions","organizations_url":"https://api.github.com/users/StrikeNP/orgs","repos_url":"https://api.github.com/users/StrikeNP/repos","events_url":"https://api.github.com/users/StrikeNP/events{/privacy}","received_events_url":"https://api.github.com/users/StrikeNP/received_events","type":"User","site_admin":false},"created_at":"2018-06-09T07:35:57Z","updated_at":"2018-06-09T07:35:57Z","author_association":"OWNER","body":"Trac update at 2013/06/11 at 15:40\n\nvlarson@uwm.edu commented:\n\nRight now, CLUBB can use Brian's \"prescribed\" correlations in the KK upscaled calculation.  However, in order to diagnose the correlations in either KK or SILHS, we will need to break up subroutine setup_pdf_parameters into two subroutines, one that \"prescribes\" correlations and another that set up hydromet_pdf_params.  The reason is that when we diagnose correlations, we still need to set up hydromet_pdf_params, but obviously we won't need to prescribe correlations.\n\nAfter we've split setup_pdf_parameters, then the next step is to check whether we can recover the old results for diagnosing the correlations and using KK upscaled.  To do so, we should prescribe the first row of correlations (set l_calc_w_corr=.false) and then print out the within-cloud and below-cloud correlation matrices from an old checkout of CLUBB and the newly modified version of CLUBB.  These two matrices will remain constant in time because the first row remains constant in time.  \n\n"}}
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