{"action":"created","comment":{"url":"https://api.github.com/repos/broadinstitute/gatk/pulls/comments/200761023","pull_request_review_id":135135620,"id":200761023,"node_id":"MDI0OlB1bGxSZXF1ZXN0UmV2aWV3Q29tbWVudDIwMDc2MTAyMw==","diff_hunk":"@@ -0,0 +1,96 @@\n+package org.broadinstitute.hellbender.tools.walkers.variantutils;\n+\n+import htsjdk.variant.variantcontext.*;\n+import htsjdk.variant.vcf.VCFConstants;\n+import org.broadinstitute.hellbender.utils.variant.GATKVCFConstants;\n+import org.testng.Assert;\n+import org.testng.annotations.Test;\n+\n+import java.util.Arrays;\n+import java.util.HashMap;\n+import java.util.List;\n+import java.util.Map;\n+\n+public class ReblockGVCFUnitTest {\n+    private final ReblockGVCF reblocker = new ReblockGVCF();","path":"src/test/java/org/broadinstitute/hellbender/tools/walkers/variantutils/ReblockGVCFUnitTest.java","position":15,"original_position":15,"commit_id":"8a221a7a6a9c38e1e8eaa4d6de64a2d1c8bcf207","original_commit_id":"8a221a7a6a9c38e1e8eaa4d6de64a2d1c8bcf207","user":{"login":"lbergelson","id":4700332,"node_id":"MDQ6VXNlcjQ3MDAzMzI=","avatar_url":"https://avatars3.githubusercontent.com/u/4700332?v=4","gravatar_id":"","url":"https://api.github.com/users/lbergelson","html_url":"https://github.com/lbergelson","followers_url":"https://api.github.com/users/lbergelson/followers","following_url":"https://api.github.com/users/lbergelson/following{/other_user}","gists_url":"https://api.github.com/users/lbergelson/gists{/gist_id}","starred_url":"https://api.github.com/users/lbergelson/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lbergelson/subscriptions","organizations_url":"https://api.github.com/users/lbergelson/orgs","repos_url":"https://api.github.com/users/lbergelson/repos","events_url":"https://api.github.com/users/lbergelson/events{/privacy}","received_events_url":"https://api.github.com/users/lbergelson/received_events","type":"User","site_admin":false},"body":"I would just create this in each test that uses it, otherwise we potentially get weird stateful issues across multiple tests.","created_at":"2018-07-06T20:30:13Z","updated_at":"2018-07-06T20:49:07Z","html_url":"https://github.com/broadinstitute/gatk/pull/4940#discussion_r200761023","pull_request_url":"https://api.github.com/repos/broadinstitute/gatk/pulls/4940","author_association":"COLLABORATOR","_links":{"self":{"href":"https://api.github.com/repos/broadinstitute/gatk/pulls/comments/200761023"},"html":{"href":"https://github.com/broadinstitute/gatk/pull/4940#discussion_r200761023"},"pull_request":{"href":"https://api.github.com/repos/broadinstitute/gatk/pulls/4940"}}},"pull_request":{"url":"https://api.github.com/repos/broadinstitute/gatk/pulls/4940","id":196816134,"node_id":"MDExOlB1bGxSZXF1ZXN0MTk2ODE2MTM0","html_url":"https://github.com/broadinstitute/gatk/pull/4940","diff_url":"https://github.com/broadinstitute/gatk/pull/4940.diff","patch_url":"https://github.com/broadinstitute/gatk/pull/4940.patch","issue_url":"https://api.github.com/repos/broadinstitute/gatk/issues/4940","number":4940,"state":"open","locked":false,"title":"GVCF \"reblocking\" code to compress homRef blocks","user":{"login":"ldgauthier","id":6578548,"node_id":"MDQ6VXNlcjY1Nzg1NDg=","avatar_url":"https://avatars0.githubusercontent.com/u/6578548?v=4","gravatar_id":"","url":"https://api.github.com/users/ldgauthier","html_url":"https://github.com/ldgauthier","followers_url":"https://api.github.com/users/ldgauthier/followers","following_url":"https://api.github.com/users/ldgauthier/following{/other_user}","gists_url":"https://api.github.com/users/ldgauthier/gists{/gist_id}","starred_url":"https://api.github.com/users/ldgauthier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ldgauthier/subscriptions","organizations_url":"https://api.github.com/users/ldgauthier/orgs","repos_url":"https://api.github.com/users/ldgauthier/repos","events_url":"https://api.github.com/users/ldgauthier/events{/privacy}","received_events_url":"https://api.github.com/users/ldgauthier/received_events","type":"User","site_admin":false},"body":"This is a port of the GATK3 version I actually ran.  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