{"action":"created","issue":{"url":"https://api.github.com/repos/mne-tools/mne-python/issues/5329","repository_url":"https://api.github.com/repos/mne-tools/mne-python","labels_url":"https://api.github.com/repos/mne-tools/mne-python/issues/5329/labels{/name}","comments_url":"https://api.github.com/repos/mne-tools/mne-python/issues/5329/comments","events_url":"https://api.github.com/repos/mne-tools/mne-python/issues/5329/events","html_url":"https://github.com/mne-tools/mne-python/pull/5329","id":339609522,"node_id":"MDExOlB1bGxSZXF1ZXN0MjAwMjIxNjY3","number":5329,"title":"[MRG] interactive visualization for volumetric stcs","user":{"login":"jasmainak","id":15852194,"node_id":"MDQ6VXNlcjE1ODUyMTk0","avatar_url":"https://avatars3.githubusercontent.com/u/15852194?v=4","gravatar_id":"","url":"https://api.github.com/users/jasmainak","html_url":"https://github.com/jasmainak","followers_url":"https://api.github.com/users/jasmainak/followers","following_url":"https://api.github.com/users/jasmainak/following{/other_user}","gists_url":"https://api.github.com/users/jasmainak/gists{/gist_id}","starred_url":"https://api.github.com/users/jasmainak/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jasmainak/subscriptions","organizations_url":"https://api.github.com/users/jasmainak/orgs","repos_url":"https://api.github.com/users/jasmainak/repos","events_url":"https://api.github.com/users/jasmainak/events{/privacy}","received_events_url":"https://api.github.com/users/jasmainak/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":29,"created_at":"2018-07-09T21:13:33Z","updated_at":"2018-07-31T20:42:48Z","closed_at":null,"author_association":"MEMBER","pull_request":{"url":"https://api.github.com/repos/mne-tools/mne-python/pulls/5329","html_url":"https://github.com/mne-tools/mne-python/pull/5329","diff_url":"https://github.com/mne-tools/mne-python/pull/5329.diff","patch_url":"https://github.com/mne-tools/mne-python/pull/5329.patch"},"body":"The goal is to create a Nutmeg style GUI [like this](https://www.youtube.com/watch?v=r3tGuZJHzT4)\r\n\r\ncc @sarangnemo @agramfort @k-jerbi\r\n\r\nI got something basic working in a couple of hours, but need to iterate. Right now, you can click on the time series and get the anatomical map (which is a bit slow), but not go the other way round.\r\n\r\n![volumetric_stc](https://user-images.githubusercontent.com/15852194/42476372-bf12aa8e-839b-11e8-8ad1-7b8d1583008a.png)\r\n\r\nFeel free to comment.\r\n\r\nTodos\r\n\r\n- [x] use nearest neighbor interpolation\r\n- [x] merge into single figure\r\n- [x] callback for going from anat to time series\r\n- [x] Fix coord transform issue\r\n- [x] Fix issue of crosshair incorrect when clicking on time series after clicking on anat\r\n- [x] Max intensity projection + crosshair for glass_brain\r\n- [x]  First point is global spatiotemporal max\r\n- [x] Fix circle CI problem\r\n- [x] mode='glass_brain' | 'anat'\r\n- [x] tests\r\n\r\n\r\n"},"comment":{"url":"https://api.github.com/repos/mne-tools/mne-python/issues/comments/409360967","html_url":"https://github.com/mne-tools/mne-python/pull/5329#issuecomment-409360967","issue_url":"https://api.github.com/repos/mne-tools/mne-python/issues/5329","id":409360967,"node_id":"MDEyOklzc3VlQ29tbWVudDQwOTM2MDk2Nw==","user":{"login":"britta-wstnr","id":20129119,"node_id":"MDQ6VXNlcjIwMTI5MTE5","avatar_url":"https://avatars0.githubusercontent.com/u/20129119?v=4","gravatar_id":"","url":"https://api.github.com/users/britta-wstnr","html_url":"https://github.com/britta-wstnr","followers_url":"https://api.github.com/users/britta-wstnr/followers","following_url":"https://api.github.com/users/britta-wstnr/following{/other_user}","gists_url":"https://api.github.com/users/britta-wstnr/gists{/gist_id}","starred_url":"https://api.github.com/users/britta-wstnr/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/britta-wstnr/subscriptions","organizations_url":"https://api.github.com/users/britta-wstnr/orgs","repos_url":"https://api.github.com/users/britta-wstnr/repos","events_url":"https://api.github.com/users/britta-wstnr/events{/privacy}","received_events_url":"https://api.github.com/users/britta-wstnr/received_events","type":"User","site_admin":false},"created_at":"2018-07-31T20:42:48Z","updated_at":"2018-07-31T20:42:48Z","author_association":"CONTRIBUTOR","body":"As far as I can see adding a Nifti via ``bg_img`` works fine, cc @sarangnemo\r\n-- at least for the ``sample`` data with a ``nii`` converted from the ``mgz``."}}
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