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`PhysiologicalFileID`       INT(10)    UNSIGNED  NOT NULL      AUTO_INCREMENT,\n+  `PhysiologicalModalityID`   TINYINT(3) UNSIGNED  DEFAULT NULL,\n+  `Caveat`                    TINYINT(1) UNSIGNED  DEFAULT 0,\n+  `PhysiologicalOutputTypeID` INT(5)     UNSIGNED  NOT NULL,\n+  `SessionID`                 INT(10)    UNSIGNED  NOT NULL,\n+  `InsertTime`                INT(10)    UNSIGNED  NOT NULL,\n+  `FileType`                  VARCHAR(12)          DEFAULT NULL,\n+  `AcquisitionTime`           VARCHAR(20)          DEFAULT NULL,\n+  `InsertedByUser`            VARCHAR(50)          NOT NULL,\n+  `File`                      VARCHAR(255)         NOT NULL,\n+  PRIMARY KEY (`PhysiologicalFileID`),\n+  CONSTRAINT `FK_session_ID`\n+    FOREIGN KEY (`SessionID`)\n+    REFERENCES `session` (`ID`),\n+  CONSTRAINT `FK_ImagingFileTypes_type`\n+    FOREIGN KEY (`FileType`)\n+    REFERENCES `ImagingFileTypes` (`type`),\n+  CONSTRAINT `FK_physiological_modality_PhysiologicalModalityID`\n+    FOREIGN KEY (`PhysiologicalModalityID`)\n+    REFERENCES `physiological_modality` (`PhysiologicalModalityID`),\n+  CONSTRAINT `FK_physiological_output_type_PhysiologicalOutputTypeID`\n+    FOREIGN KEY (`PhysiologicalOutputTypeID`)\n+    REFERENCES `physiological_output_type` (`PhysiologicalOutputTypeID`)\n+) ENGINE=InnoDB DEFAULT CHARSET=utf8;\n+\n+\n+\n+-- Create a physiological_parameter_file table that will store all JSON\n+-- information that accompanies the BIDS physiological dataset\n+CREATE TABLE `physiological_parameter_file` (\n+  `PhysiologicalParameterFileID` INT(10) UNSIGNED NOT NULL AUTO_INCREMENT,\n+  `PhysiologicalFileID`          INT(10) UNSIGNED NOT NULL,\n+  `ParameterTypeID`              INT(10) UNSIGNED NOT NULL,\n+  `InsertTime`                   INT(10) UNSIGNED NOT NULL,\n+  `Value`                        VARCHAR(255),\n+  PRIMARY KEY (`PhysiologicalParameterFileID`),\n+  CONSTRAINT `FK_physiological_file_PhysiologicalFileID`\n+    FOREIGN KEY (`PhysiologicalFileID`)\n+    REFERENCES `physiological_file` (`PhysiologicalFileID`)\n+    ON DELETE CASCADE,\n+  CONSTRAINT `FK_parameter_type_ParameterTypeID`\n+    FOREIGN KEY (`ParameterTypeID`)\n+    REFERENCES `parameter_type` (`ParameterTypeID`)\n+) ENGINE=InnoDB DEFAULT CHARSET=utf8;\n+\n+\n+\n+-- Create a physiological_status_type table\n+CREATE TABLE `physiological_status_type` (\n+  `PhysiologicalStatusTypeID` TINYINT(2) UNSIGNED NOT NULL AUTO_INCREMENT,\n+  `ChannelStatus`             VARCHAR(10)         NOT NULL,\n+  PRIMARY KEY (`PhysiologicalStatusTypeID`)\n+) ENGINE=InnoDB DEFAULT CHARSET=utf8;\n+\n+\n+\n+-- Create a physiological_channel_type table\n+CREATE TABLE `physiological_channel_type` (\n+  `PhysiologicalChannelTypeID` TINYINT(3) UNSIGNED NOT NULL      AUTO_INCREMENT,\n+  `ChannelType`                VARCHAR(255)        NOT NULL,\n+  `ChannelDescription`         VARCHAR(255)        DEFAULT NULL,\n+  PRIMARY KEY (`PhysiologicalChannelTypeID`)\n+) ENGINE=InnoDB DEFAULT CHARSET=utf8;\n+\n+\n+\n+-- Create a physiological_channel table that will store all information from\n+CREATE TABLE `physiological_channel` (\n+  `PhysiologicalChannelID`     INT(10) UNSIGNED    NOT NULL      AUTO_INCREMENT,\n+  `PhysiologicalFileID`        INT(10) UNSIGNED    NOT NULL,\n+  `PhysiologicalChannelTypeID` TINYINT(3) UNSIGNED NOT NULL,\n+  `PhysiologicalStatusTypeID`  TINYINT(2) UNSIGNED DEFAULT NULL,\n+  `Name`                       VARCHAR(50)         NOT NULL,\n+  `Description`                VARCHAR(255)        DEFAULT NULL,\n+  `SamplingFrequency`          INT(6)              DEFAULT NULL,\n+  `LowCutoff`                  DECIMAL(8,3)        DEFAULT NULL,\n+  `HighCutoff`                 DECIMAL(8,3)        DEFAULT NULL,\n+  `ManualFlag`                 DECIMAL(5,4)        DEFAULT NULL,\n+  `Notch`                      INT(6)              DEFAULT NULL,\n+  `StatusDescription`          VARCHAR(255)        DEFAULT NULL,\n+  `Unit`                       VARCHAR(255)        DEFAULT NULL,\n+  `File`                       VARCHAR(255)        DEFAULT NULL,\n+  `SoftwareFilters`            VARCHAR(255)        DEFAULT NULL,\n+  PRIMARY KEY (`PhysiologicalChannelID`),\n+  CONSTRAINT `FK_physiological_file_PhysiologicalFileID_2`\n+    FOREIGN KEY (`PhysiologicalFileID`)\n+    REFERENCES `physiological_file` (`PhysiologicalFileID`)\n+    ON DELETE CASCADE,\n+  CONSTRAINT `FK_physiological_channel_type_PhysiologicalChannelTypeID`\n+    FOREIGN KEY (`PhysiologicalChannelTypeID`)\n+    REFERENCES `physiological_channel_type` (`PhysiologicalChannelTypeID`),\n+  CONSTRAINT `FK_physiological_status_type_PhysiologicalStatusTypeID`\n+    FOREIGN KEY (`PhysiologicalStatusTypeID`)\n+    REFERENCES `physiological_status_type` (`PhysiologicalStatusTypeID`)\n+) ENGINE=InnoDB DEFAULT CHARSET=utf8;\n+\n+\n+\n+-- Create a physiological_electrode table\n+CREATE TABLE `physiological_electrode` (\n+  `PhysiologicalElectrodeID` INT(10) UNSIGNED NOT NULL      AUTO_INCREMENT,\n+  `PhysiologicalFileID`      INT(10) UNSIGNED NOT NULL,\n+  `Name`                     VARCHAR(50)      NOT NULL,\n+  `X`                        DECIMAL(12,6)    NOT NULL,\n+  `Y`                        DECIMAL(12,6)    NOT NULL,\n+  `Z`                        DECIMAL(12,6)    NOT NULL,\n+  `Type`                     VARCHAR(50)      NOT NULL,\n+  `Material`                 VARCHAR(50)      NOT NULL,","path":"SQL/New_patches/2018-09-07_EEG_tables.sql","position":126,"original_position":127,"commit_id":"924b83c13d8c3a280b8b6e4244abf4a263ec2d0c","original_commit_id":"102f0ff3f9c45ca4cf1e4ad50939843e0ffdf1c3","user":{"login":"cmadjar","id":1402456,"node_id":"MDQ6VXNlcjE0MDI0NTY=","avatar_url":"https://avatars0.githubusercontent.com/u/1402456?v=4","gravatar_id":"","url":"https://api.github.com/users/cmadjar","html_url":"https://github.com/cmadjar","followers_url":"https://api.github.com/users/cmadjar/followers","following_url":"https://api.github.com/users/cmadjar/following{/other_user}","gists_url":"https://api.github.com/users/cmadjar/gists{/gist_id}","starred_url":"https://api.github.com/users/cmadjar/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmadjar/subscriptions","organizations_url":"https://api.github.com/users/cmadjar/orgs","repos_url":"https://api.github.com/users/cmadjar/repos","events_url":"https://api.github.com/users/cmadjar/events{/privacy}","received_events_url":"https://api.github.com/users/cmadjar/received_events","type":"User","site_admin":false},"body":"OK. I will contact the EEG people I know and let you know what they say. Thanks!","created_at":"2018-09-10T18:53:22Z","updated_at":"2018-09-10T18:53:22Z","html_url":"https://github.com/aces/Loris/pull/3941#discussion_r216434345","pull_request_url":"https://api.github.com/repos/aces/Loris/pulls/3941","author_association":"CONTRIBUTOR","_links":{"self":{"href":"https://api.github.com/repos/aces/Loris/pulls/comments/216434345"},"html":{"href":"https://github.com/aces/Loris/pull/3941#discussion_r216434345"},"pull_request":{"href":"https://api.github.com/repos/aces/Loris/pulls/3941"}},"in_reply_to_id":216306322},"pull_request":{"url":"https://api.github.com/repos/aces/Loris/pulls/3941","id":214011004,"node_id":"MDExOlB1bGxSZXF1ZXN0MjE0MDExMDA0","html_url":"https://github.com/aces/Loris/pull/3941","diff_url":"https://github.com/aces/Loris/pull/3941.diff","patch_url":"https://github.com/aces/Loris/pull/3941.patch","issue_url":"https://api.github.com/repos/aces/Loris/issues/3941","number":3941,"state":"open","locked":false,"title":"[New Feature] Adding the SQL patch for the EEG tables","user":{"login":"cmadjar","id":1402456,"node_id":"MDQ6VXNlcjE0MDI0NTY=","avatar_url":"https://avatars0.githubusercontent.com/u/1402456?v=4","gravatar_id":"","url":"https://api.github.com/users/cmadjar","html_url":"https://github.com/cmadjar","followers_url":"https://api.github.com/users/cmadjar/followers","following_url":"https://api.github.com/users/cmadjar/following{/other_user}","gists_url":"https://api.github.com/users/cmadjar/gists{/gist_id}","starred_url":"https://api.github.com/users/cmadjar/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmadjar/subscriptions","organizations_url":"https://api.github.com/users/cmadjar/orgs","repos_url":"https://api.github.com/users/cmadjar/repos","events_url":"https://api.github.com/users/cmadjar/events{/privacy}","received_events_url":"https://api.github.com/users/cmadjar/received_events","type":"User","site_admin":false},"body":"### Brief summary of changes\r\n\r\nThis PR includes the SQL patch to be run to create the EEG tables for the insertion scripts of the LORIS-MRI. Note that these tables will be used by the new Electrophysiology Browser module that will be in a separate PR.\r\n\r\nThis PR goes hand in hand with the following LORIS-MRI PR: https://github.com/aces/Loris-MRI/pull/337\r\n\r\nFor people that are visual, here is a screenshot summarizing the table structure for the EEG tables:\r\n\r\n![overall_view](https://user-images.githubusercontent.com/1402456/45237607-2edb2400-b2ad-11e8-9293-4534f4107423.png)\r\n\r\n\r\n### This resolves issue...\r\n\r\n- [ ] Redmine? https://redmine.cbrain.mcgill.ca/issues/13603\r\n\r\n\r\n### To test this change...\r\n\r\n- Run the SQL patch and makes sure all statements work properly\r\n- If you have an empty database, run the default schema with the new changes to make sure all statements work properly\r\n- Feel free to make sure that the tables follow the LORIS SQL standard (crossing my fingers that I did not omit anything there!)","created_at":"2018-09-07T18:51:25Z","updated_at":"2018-09-10T18:53:22Z","closed_at":null,"merged_at":null,"merge_commit_sha":"82b09b4c5d4288ca22929cacb703eab7aff0b1a9","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[{"id":152299721,"node_id":"MDU6TGFiZWwxNTIyOTk3MjE=","url":"https://api.github.com/repos/aces/Loris/labels/Add%20to%20Release%20Notes","name":"Add to Release 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