{"action":"opened","number":716,"pull_request":{"url":"https://api.github.com/repos/sorgerlab/indra/pulls/716","id":233799477,"node_id":"MDExOlB1bGxSZXF1ZXN0MjMzNzk5NDc3","html_url":"https://github.com/sorgerlab/indra/pull/716","diff_url":"https://github.com/sorgerlab/indra/pull/716.diff","patch_url":"https://github.com/sorgerlab/indra/pull/716.patch","issue_url":"https://api.github.com/repos/sorgerlab/indra/issues/716","number":716,"state":"open","locked":false,"title":"WM ontologies update","user":{"login":"bgyori","id":5939016,"node_id":"MDQ6VXNlcjU5MzkwMTY=","avatar_url":"https://avatars0.githubusercontent.com/u/5939016?v=4","gravatar_id":"","url":"https://api.github.com/users/bgyori","html_url":"https://github.com/bgyori","followers_url":"https://api.github.com/users/bgyori/followers","following_url":"https://api.github.com/users/bgyori/following{/other_user}","gists_url":"https://api.github.com/users/bgyori/gists{/gist_id}","starred_url":"https://api.github.com/users/bgyori/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgyori/subscriptions","organizations_url":"https://api.github.com/users/bgyori/orgs","repos_url":"https://api.github.com/users/bgyori/repos","events_url":"https://api.github.com/users/bgyori/events{/privacy}","received_events_url":"https://api.github.com/users/bgyori/received_events","type":"User","site_admin":false},"body":"This PR:\r\n- Updates the Eidos/UN, and Hume ontologies\r\n- Integrates the SOFIA ontology with INDRA\r\n- Adds and updates scripts to generate TSV files for ontology mapping\r\n- Adds an interface to the Eidos mapper to generate ontology mappings between Eidos, Hume and SOFIA\r\n- Updates the WM ontology mappings resource file","created_at":"2018-11-27T06:57:15Z","updated_at":"2018-11-27T06:57:15Z","closed_at":null,"merged_at":null,"merge_commit_sha":null,"assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/sorgerlab/indra/pulls/716/commits","review_comments_url":"https://api.github.com/repos/sorgerlab/indra/pulls/716/comments","review_comment_url":"https://api.github.com/repos/sorgerlab/indra/pulls/comments{/number}","comments_url":"https://api.github.com/repos/sorgerlab/indra/issues/716/comments","statuses_url":"https://api.github.com/repos/sorgerlab/indra/statuses/0b50354634eeec8ba6c0d4226b9b4df9207e06c1","head":{"label":"bgyori:wm_onto","ref":"wm_onto","sha":"0b50354634eeec8ba6c0d4226b9b4df9207e06c1","user":{"login":"bgyori","id":5939016,"node_id":"MDQ6VXNlcjU5MzkwMTY=","avatar_url":"https://avatars0.githubusercontent.com/u/5939016?v=4","gravatar_id":"","url":"https://api.github.com/users/bgyori","html_url":"https://github.com/bgyori","followers_url":"https://api.github.com/users/bgyori/followers","following_url":"https://api.github.com/users/bgyori/following{/other_user}","gists_url":"https://api.github.com/users/bgyori/gists{/gist_id}","starred_url":"https://api.github.com/users/bgyori/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgyori/subscriptions","organizations_url":"https://api.github.com/users/bgyori/orgs","repos_url":"https://api.github.com/users/bgyori/repos","events_url":"https://api.github.com/users/bgyori/events{/privacy}","received_events_url":"https://api.github.com/users/bgyori/received_events","type":"User","site_admin":false},"repo":{"id":29264586,"node_id":"MDEwOlJlcG9zaXRvcnkyOTI2NDU4Ng==","name":"indra","full_name":"bgyori/indra","private":false,"owner":{"login":"bgyori","id":5939016,"node_id":"MDQ6VXNlcjU5MzkwMTY=","avatar_url":"https://avatars0.githubusercontent.com/u/5939016?v=4","gravatar_id":"","url":"https://api.github.com/users/bgyori","html_url":"https://github.com/bgyori","followers_url":"https://api.github.com/users/bgyori/followers","following_url":"https://api.github.com/users/bgyori/following{/other_user}","gists_url":"https://api.github.com/users/bgyori/gists{/gist_id}","starred_url":"https://api.github.com/users/bgyori/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgyori/subscriptions","organizations_url":"https://api.github.com/users/bgyori/orgs","repos_url":"https://api.github.com/users/bgyori/repos","events_url":"https://api.github.com/users/bgyori/events{/privacy}","received_events_url":"https://api.github.com/users/bgyori/received_events","type":"User","site_admin":false},"html_url":"https://github.com/bgyori/indra","description":"Integrated Network and Dynamical Reasoning Assembler","fork":true,"url":"https://api.github.com/repos/bgyori/indra","forks_url":"https://api.github.com/repos/bgyori/indra/forks","keys_url":"https://api.github.com/repos/bgyori/indra/keys{/key_id}","collaborators_url":"https://api.github.com/repos/bgyori/indra/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/bgyori/indra/teams","hooks_url":"https://api.github.com/repos/bgyori/indra/hooks","issue_events_url":"https://api.github.com/repos/bgyori/indra/issues/events{/number}","events_url":"https://api.github.com/repos/bgyori/indra/events","assignees_url":"https://api.github.com/repos/bgyori/indra/assignees{/user}","branches_url":"https://api.github.com/repos/bgyori/indra/branches{/branch}","tags_url":"https://api.github.com/repos/bgyori/indra/tags","blobs_url":"https://api.github.com/repos/bgyori/indra/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/bgyori/indra/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/bgyori/indra/git/refs{/sha}","trees_url":"https://api.github.com/repos/bgyori/indra/git/trees{/sha}","statuses_url":"https://api.github.com/repos/bgyori/indra/statuses/{sha}","languages_url":"https://api.github.com/repos/bgyori/indra/languages","stargazers_url":"https://api.github.com/repos/bgyori/indra/stargazers","contributors_url":"https://api.github.com/repos/bgyori/indra/contributors","subscribers_url":"https://api.github.com/repos/bgyori/indra/subscribers","subscription_url":"https://api.github.com/repos/bgyori/indra/subscription","commits_url":"https://api.github.com/repos/bgyori/indra/commits{/sha}","git_commits_url":"https://api.github.com/repos/bgyori/indra/git/commits{/sha}","comments_url":"https://api.github.com/repos/bgyori/indra/comments{/number}","issue_comment_url":"https://api.github.com/repos/bgyori/indra/issues/comments{/number}","contents_url":"https://api.github.com/repos/bgyori/indra/contents/{+path}","compare_url":"https://api.github.com/repos/bgyori/indra/compare/{base}...{head}","merges_url":"https://api.github.com/repos/bgyori/indra/merges","archive_url":"https://api.github.com/repos/bgyori/indra/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/bgyori/indra/downloads","issues_url":"https://api.github.com/repos/bgyori/indra/issues{/number}","pulls_url":"https://api.github.com/repos/bgyori/indra/pulls{/number}","milestones_url":"https://api.github.com/repos/bgyori/indra/milestones{/number}","notifications_url":"https://api.github.com/repos/bgyori/indra/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/bgyori/indra/labels{/name}","releases_url":"https://api.github.com/repos/bgyori/indra/releases{/id}","deployments_url":"https://api.github.com/repos/bgyori/indra/deployments","created_at":"2015-01-14T20:38:55Z","updated_at":"2018-11-21T21:17:10Z","pushed_at":"2018-11-27T06:57:10Z","git_url":"git://github.com/bgyori/indra.git","ssh_url":"git@github.com:bgyori/indra.git","clone_url":"https://github.com/bgyori/indra.git","svn_url":"https://github.com/bgyori/indra","homepage":"","size":144247,"stargazers_count":0,"watchers_count":0,"language":"Python","has_issues":false,"has_projects":false,"has_downloads":true,"has_wiki":false,"has_pages":false,"forks_count":1,"mirror_url":null,"archived":false,"open_issues_count":0,"license":{"key":"bsd-2-clause","name":"BSD 2-Clause \"Simplified\" License","spdx_id":"BSD-2-Clause","url":"https://api.github.com/licenses/bsd-2-clause","node_id":"MDc6TGljZW5zZTQ="},"forks":1,"open_issues":0,"watchers":0,"default_branch":"master"}},"base":{"label":"sorgerlab:master","ref":"master","sha":"926e6a1937a02d894ad358887a097902f48656ef","user":{"login":"sorgerlab","id":432619,"node_id":"MDEyOk9yZ2FuaXphdGlvbjQzMjYxOQ==","avatar_url":"https://avatars3.githubusercontent.com/u/432619?v=4","gravatar_id":"","url":"https://api.github.com/users/sorgerlab","html_url":"https://github.com/sorgerlab","followers_url":"https://api.github.com/users/sorgerlab/followers","following_url":"https://api.github.com/users/sorgerlab/following{/other_user}","gists_url":"https://api.github.com/users/sorgerlab/gists{/gist_id}","starred_url":"https://api.github.com/users/sorgerlab/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sorgerlab/subscriptions","organizations_url":"https://api.github.com/users/sorgerlab/orgs","repos_url":"https://api.github.com/users/sorgerlab/repos","events_url":"https://api.github.com/users/sorgerlab/events{/privacy}","received_events_url":"https://api.github.com/users/sorgerlab/received_events","type":"Organization","site_admin":false},"repo":{"id":22848436,"node_id":"MDEwOlJlcG9zaXRvcnkyMjg0ODQzNg==","name":"indra","full_name":"sorgerlab/indra","private":false,"owner":{"login":"sorgerlab","id":432619,"node_id":"MDEyOk9yZ2FuaXphdGlvbjQzMjYxOQ==","avatar_url":"https://avatars3.githubusercontent.com/u/432619?v=4","gravatar_id":"","url":"https://api.github.com/users/sorgerlab","html_url":"https://github.com/sorgerlab","followers_url":"https://api.github.com/users/sorgerlab/followers","following_url":"https://api.github.com/users/sorgerlab/following{/other_user}","gists_url":"https://api.github.com/users/sorgerlab/gists{/gist_id}","starred_url":"https://api.github.com/users/sorgerlab/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/sorgerlab/subscriptions","organizations_url":"https://api.github.com/users/sorgerlab/orgs","repos_url":"https://api.github.com/users/sorgerlab/repos","events_url":"https://api.github.com/users/sorgerlab/events{/privacy}","received_events_url":"https://api.github.com/users/sorgerlab/received_events","type":"Organization","site_admin":false},"html_url":"https://github.com/sorgerlab/indra","description":"INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly, produce causal graphs and dynamical models.","fork":false,"url":"https://api.github.com/repos/sorgerlab/indra","forks_url":"https://api.github.com/repos/sorgerlab/indra/forks","keys_url":"https://api.github.com/repos/sorgerlab/indra/keys{/key_id}","collaborators_url":"https://api.github.com/repos/sorgerlab/indra/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/sorgerlab/indra/teams","hooks_url":"https://api.github.com/repos/sorgerlab/indra/hooks","issue_events_url":"https://api.github.com/repos/sorgerlab/indra/issues/events{/number}","events_url":"https://api.github.com/repos/sorgerlab/indra/events","assignees_url":"https://api.github.com/repos/sorgerlab/indra/assignees{/user}","branches_url":"https://api.github.com/repos/sorgerlab/indra/branches{/branch}","tags_url":"https://api.github.com/repos/sorgerlab/indra/tags","blobs_url":"https://api.github.com/repos/sorgerlab/indra/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/sorgerlab/indra/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/sorgerlab/indra/git/refs{/sha}","trees_url":"https://api.github.com/repos/sorgerlab/indra/git/trees{/sha}","statuses_url":"https://api.github.com/repos/sorgerlab/indra/statuses/{sha}","languages_url":"https://api.github.com/repos/sorgerlab/indra/languages","stargazers_url":"https://api.github.com/repos/sorgerlab/indra/stargazers","contributors_url":"https://api.github.com/repos/sorgerlab/indra/contributors","subscribers_url":"https://api.github.com/repos/sorgerlab/indra/subscribers","subscription_url":"https://api.github.com/repos/sorgerlab/indra/subscription","commits_url":"https://api.github.com/repos/sorgerlab/indra/commits{/sha}","git_commits_url":"https://api.github.com/repos/sorgerlab/indra/git/commits{/sha}","comments_url":"https://api.github.com/repos/sorgerlab/indra/comments{/number}","issue_comment_url":"https://api.github.com/repos/sorgerlab/indra/issues/comments{/number}","contents_url":"https://api.github.com/repos/sorgerlab/indra/contents/{+path}","compare_url":"https://api.github.com/repos/sorgerlab/indra/compare/{base}...{head}","merges_url":"https://api.github.com/repos/sorgerlab/indra/merges","archive_url":"https://api.github.com/repos/sorgerlab/indra/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/sorgerlab/indra/downloads","issues_url":"https://api.github.com/repos/sorgerlab/indra/issues{/number}","pulls_url":"https://api.github.com/repos/sorgerlab/indra/pulls{/number}","milestones_url":"https://api.github.com/repos/sorgerlab/indra/milestones{/number}","notifications_url":"https://api.github.com/repos/sorgerlab/indra/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/sorgerlab/indra/labels{/name}","releases_url":"https://api.github.com/repos/sorgerlab/indra/releases{/id}","deployments_url":"https://api.github.com/repos/sorgerlab/indra/deployments","created_at":"2014-08-11T17:44:05Z","updated_at":"2018-11-26T01:32:24Z","pushed_at":"2018-11-26T01:32:22Z","git_url":"git://github.com/sorgerlab/indra.git","ssh_url":"git@github.com:sorgerlab/indra.git","clone_url":"https://github.com/sorgerlab/indra.git","svn_url":"https://github.com/sorgerlab/indra","homepage":"http://indra.bio","size":134282,"stargazers_count":44,"watchers_count":44,"language":"Python","has_issues":true,"has_projects":false,"has_downloads":true,"has_wiki":false,"has_pages":true,"forks_count":26,"mirror_url":null,"archived":false,"open_issues_count":52,"license":{"key":"bsd-2-clause","name":"BSD 2-Clause \"Simplified\" License","spdx_id":"BSD-2-Clause","url":"https://api.github.com/licenses/bsd-2-clause","node_id":"MDc6TGljZW5zZTQ="},"forks":26,"open_issues":52,"watchers":44,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/sorgerlab/indra/pulls/716"},"html":{"href":"https://github.com/sorgerlab/indra/pull/716"},"issue":{"href":"https://api.github.com/repos/sorgerlab/indra/issues/716"},"comments":{"href":"https://api.github.com/repos/sorgerlab/indra/issues/716/comments"},"review_comments":{"href":"https://api.github.com/repos/sorgerlab/indra/pulls/716/comments"},"review_comment":{"href":"https://api.github.com/repos/sorgerlab/indra/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/sorgerlab/indra/pulls/716/commits"},"statuses":{"href":"https://api.github.com/repos/sorgerlab/indra/statuses/0b50354634eeec8ba6c0d4226b9b4df9207e06c1"}},"author_association":"MEMBER","merged":false,"mergeable":null,"rebaseable":null,"mergeable_state":"unknown","merged_by":null,"comments":0,"review_comments":0,"maintainer_can_modify":true,"commits":19,"additions":4360,"deletions":21712,"changed_files":12}}
{"actor":{"display_login":"bgyori"}}