{"action":"created","issue":{"url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/29","repository_url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE","labels_url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/29/labels{/name}","comments_url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/29/comments","events_url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/29/events","html_url":"https://github.com/LANL-Bioinformatics/EDGE/issues/29","id":346206577,"node_id":"MDU6SXNzdWUzNDYyMDY1Nzc=","number":29,"title":"How to sync NCBI_Genomes with ref_list.json file?","user":{"login":"mattjmeier","id":14365280,"node_id":"MDQ6VXNlcjE0MzY1Mjgw","avatar_url":"https://avatars0.githubusercontent.com/u/14365280?v=4","gravatar_id":"","url":"https://api.github.com/users/mattjmeier","html_url":"https://github.com/mattjmeier","followers_url":"https://api.github.com/users/mattjmeier/followers","following_url":"https://api.github.com/users/mattjmeier/following{/other_user}","gists_url":"https://api.github.com/users/mattjmeier/gists{/gist_id}","starred_url":"https://api.github.com/users/mattjmeier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mattjmeier/subscriptions","organizations_url":"https://api.github.com/users/mattjmeier/orgs","repos_url":"https://api.github.com/users/mattjmeier/repos","events_url":"https://api.github.com/users/mattjmeier/events{/privacy}","received_events_url":"https://api.github.com/users/mattjmeier/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-07-31T14:13:19Z","updated_at":"2018-07-31T17:38:39Z","closed_at":null,"author_association":"NONE","body":"Hello,\r\n\r\nI'm attempting to do some reference-based analysis, but I'm getting the error:\r\n\r\n`Cannot file genbank for Klebsiella_aerogenes_ASM102199v1. The NCBI_genomes are not be synced with Ref_list.json file.`\r\n\r\nHowever, it seems to work fine with other genomes. I think it could be related to the fact that the folder in the NCBI_genomes database is called _Enterobacter__aerogenes_ASM102199v1, but the dropdown menu in EDGE is looking for Klebsiella_aerogenes_ASM102199v1. I can't actually locate the ref_list.json file.\r\n\r\nAny idea what I should do?\r\n\r\nThanks,\r\nMatt"},"comment":{"url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/comments/409305853","html_url":"https://github.com/LANL-Bioinformatics/EDGE/issues/29#issuecomment-409305853","issue_url":"https://api.github.com/repos/LANL-Bioinformatics/EDGE/issues/29","id":409305853,"node_id":"MDEyOklzc3VlQ29tbWVudDQwOTMwNTg1Mw==","user":{"login":"mattjmeier","id":14365280,"node_id":"MDQ6VXNlcjE0MzY1Mjgw","avatar_url":"https://avatars0.githubusercontent.com/u/14365280?v=4","gravatar_id":"","url":"https://api.github.com/users/mattjmeier","html_url":"https://github.com/mattjmeier","followers_url":"https://api.github.com/users/mattjmeier/followers","following_url":"https://api.github.com/users/mattjmeier/following{/other_user}","gists_url":"https://api.github.com/users/mattjmeier/gists{/gist_id}","starred_url":"https://api.github.com/users/mattjmeier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mattjmeier/subscriptions","organizations_url":"https://api.github.com/users/mattjmeier/orgs","repos_url":"https://api.github.com/users/mattjmeier/repos","events_url":"https://api.github.com/users/mattjmeier/events{/privacy}","received_events_url":"https://api.github.com/users/mattjmeier/received_events","type":"User","site_admin":false},"created_at":"2018-07-31T17:38:39Z","updated_at":"2018-07-31T17:38:39Z","author_association":"NONE","body":"Thanks for the quick reply. I will update my database.\r\n\r\nMatt"}}
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