{"action":"created","issue":{"url":"https://api.github.com/repos/poldracklab/mriqc/issues/694","repository_url":"https://api.github.com/repos/poldracklab/mriqc","labels_url":"https://api.github.com/repos/poldracklab/mriqc/issues/694/labels{/name}","comments_url":"https://api.github.com/repos/poldracklab/mriqc/issues/694/comments","events_url":"https://api.github.com/repos/poldracklab/mriqc/issues/694/events","html_url":"https://github.com/poldracklab/mriqc/issues/694","id":298420421,"number":694,"title":"Invalid literal for int() in AFNISkullStripWorkflow","user":{"login":"jokedurnez","id":7630327,"avatar_url":"https://avatars0.githubusercontent.com/u/7630327?v=4","gravatar_id":"","url":"https://api.github.com/users/jokedurnez","html_url":"https://github.com/jokedurnez","followers_url":"https://api.github.com/users/jokedurnez/followers","following_url":"https://api.github.com/users/jokedurnez/following{/other_user}","gists_url":"https://api.github.com/users/jokedurnez/gists{/gist_id}","starred_url":"https://api.github.com/users/jokedurnez/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jokedurnez/subscriptions","organizations_url":"https://api.github.com/users/jokedurnez/orgs","repos_url":"https://api.github.com/users/jokedurnez/repos","events_url":"https://api.github.com/users/jokedurnez/events{/privacy}","received_events_url":"https://api.github.com/users/jokedurnez/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-02-19T22:44:48Z","updated_at":"2018-02-19T23:00:53Z","closed_at":null,"author_association":"CONTRIBUTOR","body":"Running mriqc_0.10.0 (latest singularity container on sherlock):\r\n\r\n```\r\nmore crash-20180219-223807-jdurnez-skullstrip.a0-fd7decb7-03b1-4057-8627-3b078d699d4e.txt\r\nNode: workflow_enumerator.anatMRIQCT2w.AFNISkullStripWorkflow.skullstrip\r\nWorking directory: /lscratch/jdurnez/workflow_enumerator/anatMRIQCT2w/AFNISkullStripWorkflow/_in_file_..oak..stanford..groups..russpold..data..Psychosis..0.0.2..sub-S9184VMG..anat..sub-S9184VMG_run-1_T2w.nii.\r\ngz/skullstrip\r\n\r\nNode inputs:\r\n\r\nargs = <undefined>\r\nenviron = {}\r\nignore_exception = False\r\nin_file = /lscratch/jdurnez/workflow_enumerator/anatMRIQCT2w/AFNISkullStripWorkflow/_in_file_..oak..stanford..groups..russpold..data..Psychosis..0.0.2..sub-S9184VMG..anat..sub-S9184VMG_run-1_T2w.nii.gz/inu_n4\r\n/sub-S9184VMG_run-1_T2w_conformed_corrected.nii.gz\r\nnum_threads = 1\r\nout_file = <undefined>\r\n\r\noutputtype = NIFTI_GZ\r\nterminal_output = <undefined>\r\n\r\nTraceback (most recent call last):\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/pipeline/plugins/multiproc.py\", line 51, in run_node\r\n    result['result'] = node.run(updatehash=updatehash)\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/pipeline/engine/nodes.py\", line 407, in run\r\n    self._run_interface()\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/pipeline/engine/nodes.py\", line 517, in _run_interface\r\n    self._result = self._run_command(execute)\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/pipeline/engine/nodes.py\", line 650, in _run_command\r\n    result = self._interface.run()\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/interfaces/base.py\", line 1062, in run\r\n    env['DISPLAY'] = config.get_display()\r\n  File \"/usr/local/miniconda/lib/python3.6/site-packages/niworkflows/nipype/utils/config.py\", line 283, in get_display\r\n    ndisp = int(sysdisplay.split(':')[-1])\r\nValueError: invalid literal for int() with base 10: '18.0'\r\n```"},"comment":{"url":"https://api.github.com/repos/poldracklab/mriqc/issues/comments/366822599","html_url":"https://github.com/poldracklab/mriqc/issues/694#issuecomment-366822599","issue_url":"https://api.github.com/repos/poldracklab/mriqc/issues/694","id":366822599,"user":{"login":"chrisfilo","id":238759,"avatar_url":"https://avatars2.githubusercontent.com/u/238759?v=4","gravatar_id":"","url":"https://api.github.com/users/chrisfilo","html_url":"https://github.com/chrisfilo","followers_url":"https://api.github.com/users/chrisfilo/followers","following_url":"https://api.github.com/users/chrisfilo/following{/other_user}","gists_url":"https://api.github.com/users/chrisfilo/gists{/gist_id}","starred_url":"https://api.github.com/users/chrisfilo/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/chrisfilo/subscriptions","organizations_url":"https://api.github.com/users/chrisfilo/orgs","repos_url":"https://api.github.com/users/chrisfilo/repos","events_url":"https://api.github.com/users/chrisfilo/events{/privacy}","received_events_url":"https://api.github.com/users/chrisfilo/received_events","type":"User","site_admin":false},"created_at":"2018-02-19T23:00:53Z","updated_at":"2018-02-19T23:00:53Z","author_association":"COLLABORATOR","body":"Seems to be a duplicate of https://github.com/poldracklab/mriqc/issues/672"}}
{"actor":{"display_login":"chrisfilo"}}