{"action":"created","issue":{"url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/1","repository_url":"https://api.github.com/repos/hmenke/ryuon-cmake","labels_url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/1/labels{/name}","comments_url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/1/comments","events_url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/1/events","html_url":"https://github.com/hmenke/ryuon-cmake/issues/1","id":356162904,"node_id":"MDU6SXNzdWUzNTYxNjI5MDQ=","number":1,"title":"Could NOT find ARPACK (missing: ARPACK_LIBRARIES)","user":{"login":"ZERuan","id":42877696,"node_id":"MDQ6VXNlcjQyODc3Njk2","avatar_url":"https://avatars0.githubusercontent.com/u/42877696?v=4","gravatar_id":"","url":"https://api.github.com/users/ZERuan","html_url":"https://github.com/ZERuan","followers_url":"https://api.github.com/users/ZERuan/followers","following_url":"https://api.github.com/users/ZERuan/following{/other_user}","gists_url":"https://api.github.com/users/ZERuan/gists{/gist_id}","starred_url":"https://api.github.com/users/ZERuan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ZERuan/subscriptions","organizations_url":"https://api.github.com/users/ZERuan/orgs","repos_url":"https://api.github.com/users/ZERuan/repos","events_url":"https://api.github.com/users/ZERuan/events{/privacy}","received_events_url":"https://api.github.com/users/ZERuan/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":18,"created_at":"2018-09-01T02:11:37Z","updated_at":"2018-09-03T00:07:29Z","closed_at":null,"author_association":"NONE","body":"Thank you for your help, but new error: Could NOT find ARPACK (missing: ARPACK_LIBRARIES)\r\n\r\nThe program is:\r\n```\r\nzruan@ci2ma-All-Series:~$ cd Desktop/ryuon-cmake/\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake$ mkdir build\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake$ cd build/\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake/build$ cmake ..\r\n-- The C compiler identification is GNU 5.4.0\r\n-- Check for working C compiler: /usr/bin/cc\r\n-- Check for working C compiler: /usr/bin/cc -- works\r\n-- Detecting C compiler ABI info\r\n-- Detecting C compiler ABI info - done\r\n-- Detecting C compile features\r\n-- Detecting C compile features - done\r\n-- The Fortran compiler identification is GNU 5.4.0\r\n-- Check for working Fortran compiler: /usr/bin/gfortran\r\n-- Check for working Fortran compiler: /usr/bin/gfortran  -- works\r\n-- Detecting Fortran compiler ABI info\r\n-- Detecting Fortran compiler ABI info - done\r\n-- Checking whether /usr/bin/gfortran supports Fortran 90\r\n-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes\r\nCMake Error at /usr/local/share/cmake-3.12/Modules/FindPackageHandleStandardArgs.cmake:137 (message):\r\n  Could NOT find ARPACK (missing: ARPACK_LIBRARIES)\r\nCall Stack (most recent call first):\r\n  /usr/local/share/cmake-3.12/Modules/FindPackageHandleStandardArgs.cmake:378 (_FPHSA_FAILURE_MESSAGE)\r\n  FindARPACK.cmake:6 (find_package_handle_standard_args)\r\n  CMakeLists.txt:35 (find_package)\r\n\r\n\r\n-- Configuring incomplete, errors occurred!\r\nSee also \"/home/zruan/Desktop/ryuon-cmake/build/CMakeFiles/CMakeOutput.log\".\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake/build$ make -j 16\r\nmake: *** No targets specified and no makefile found.  Stop.\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake/build$ make -j 16 test\r\nmake: *** No rule to make target 'test'.  Stop.\r\nzruan@ci2ma-All-Series:~/Desktop/ryuon-cmake/build$ \r\n```"},"comment":{"url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/comments/417969618","html_url":"https://github.com/hmenke/ryuon-cmake/issues/1#issuecomment-417969618","issue_url":"https://api.github.com/repos/hmenke/ryuon-cmake/issues/1","id":417969618,"node_id":"MDEyOklzc3VlQ29tbWVudDQxNzk2OTYxOA==","user":{"login":"ZERuan","id":42877696,"node_id":"MDQ6VXNlcjQyODc3Njk2","avatar_url":"https://avatars0.githubusercontent.com/u/42877696?v=4","gravatar_id":"","url":"https://api.github.com/users/ZERuan","html_url":"https://github.com/ZERuan","followers_url":"https://api.github.com/users/ZERuan/followers","following_url":"https://api.github.com/users/ZERuan/following{/other_user}","gists_url":"https://api.github.com/users/ZERuan/gists{/gist_id}","starred_url":"https://api.github.com/users/ZERuan/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ZERuan/subscriptions","organizations_url":"https://api.github.com/users/ZERuan/orgs","repos_url":"https://api.github.com/users/ZERuan/repos","events_url":"https://api.github.com/users/ZERuan/events{/privacy}","received_events_url":"https://api.github.com/users/ZERuan/received_events","type":"User","site_admin":false},"created_at":"2018-09-03T00:07:29Z","updated_at":"2018-09-03T00:07:29Z","author_association":"NONE","body":"Hi Menke, Thanks a lot.\r\nI think I have install libiter, libstokes and stokes successfully:\r\n\r\nroot@阮竹恩:~/ryuon-cmake/build# sudo make install\r\n[ 12%] Built target iter_object\r\n[ 13%] Built target iter_static\r\n[ 19%] Built target nitsol_object\r\n[ 20%] Built target nitsol_static\r\n[ 21%] Built target nitsol_shared\r\n[ 91%] Built target stokes_object\r\n[ 92%] Built target iter_shared\r\n[ 93%] Built target stokes_shared\r\n[ 94%] Built target stokes_static\r\n[ 96%] Built target stokes3\r\n[ 98%] Built target test-stokes\r\n[100%] Built target _stokes\r\nInstall the project...\r\n-- Install configuration: \"\"\r\n-- Installing: /usr/local/include/nitsol/nitsol.h\r\n-- Installing: /usr/local/lib/libnitsol.so\r\n-- Installing: /usr/local/include/libiter\r\n-- Installing: /usr/local/include/libiter/atpres.h\r\n-- Installing: /usr/local/include/libiter/bi-cgstab.h\r\n-- Installing: /usr/local/include/libiter/bicg.h\r\n-- Installing: /usr/local/include/libiter/bicgstab.h\r\n-- Installing: /usr/local/include/libiter/bico.h\r\n-- Installing: /usr/local/include/libiter/cg.h\r\n-- Installing: /usr/local/include/libiter/cg_.h\r\n-- Installing: /usr/local/include/libiter/cgne.h\r\n-- Installing: /usr/local/include/libiter/cgs.h\r\n-- Installing: /usr/local/include/libiter/gmres.h\r\n-- Installing: /usr/local/include/libiter/libiter.h\r\n-- Installing: /usr/local/include/libiter/memory-check.h\r\n-- Installing: /usr/local/include/libiter/myblas.h\r\n-- Installing: /usr/local/include/libiter/orthomin.h\r\n-- Installing: /usr/local/include/libiter/qmr.h\r\n-- Installing: /usr/local/include/libiter/steepest.h\r\n-- Installing: /usr/local/lib/libiter.so\r\n-- Installing: /usr/local/include/libstokes\r\n-- Installing: /usr/local/include/libstokes/KIrand.h\r\n-- Installing: /usr/local/include/libstokes/angles-guile.h\r\n-- Installing: /usr/local/include/libstokes/angles.h\r\n-- Installing: /usr/local/include/libstokes/bd-imp-fast.h\r\n-- Installing: /usr/local/include/libstokes/bd-imp-nitsol.h\r\n-- Installing: /usr/local/include/libstokes/bd-imp.h\r\n-- Installing: /usr/local/include/libstokes/bead-rod-guile.h\r\n-- Installing: /usr/local/include/libstokes/bead-rod.h\r\n-- Installing: /usr/local/include/libstokes/bench.h\r\n-- Installing: /usr/local/include/libstokes/bonds-groups.h\r\n-- Installing: /usr/local/include/libstokes/bonds-guile.h\r\n-- Installing: /usr/local/include/libstokes/bonds.h\r\n-- Installing: /usr/local/include/libstokes/brownian.h\r\n-- Installing: /usr/local/include/libstokes/chebyshev.h\r\n-- Installing: /usr/local/include/libstokes/coll.h\r\n-- Installing: /usr/local/include/libstokes/confinement-guile.h\r\n-- Installing: /usr/local/include/libstokes/confinement.h\r\n-- Installing: /usr/local/include/libstokes/dgeev_c.h\r\n-- Installing: /usr/local/include/libstokes/dgemm_c.h\r\n-- Installing: /usr/local/include/libstokes/dgemv_c.h\r\n-- Installing: /usr/local/include/libstokes/dgetri_c.h\r\n-- Installing: /usr/local/include/libstokes/dnaupd_c.h\r\n-- Installing: /usr/local/include/libstokes/dpotrf_c.h\r\n-- Installing: /usr/local/include/libstokes/dsaupd_c.h\r\n-- Installing: /usr/local/include/libstokes/ev-LJ-guile.h\r\n-- Installing: /usr/local/include/libstokes/ev-LJ.h\r\n-- Installing: /usr/local/include/libstokes/ev-dh-grid.h\r\n-- Installing: /usr/local/include/libstokes/ev-dh-guile.h\r\n-- Installing: /usr/local/include/libstokes/ev-dh.h\r\n-- Installing: /usr/local/include/libstokes/ewald-2.h\r\n-- Installing: /usr/local/include/libstokes/ewald-2f.h\r\n-- Installing: /usr/local/include/libstokes/ewald-2ft.h\r\n-- Installing: /usr/local/include/libstokes/ewald-2fts.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3f-matrix.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3f.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3ft-matrix.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3ft.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3fts-matrix.h\r\n-- Installing: /usr/local/include/libstokes/ewald-3fts.h\r\n-- Installing: /usr/local/include/libstokes/ewald.h\r\n-- Installing: /usr/local/include/libstokes/excluded-volume-guile.h\r\n-- Installing: /usr/local/include/libstokes/excluded-volume.h\r\n-- Installing: /usr/local/include/libstokes/f.h\r\n-- Installing: /usr/local/include/libstokes/ft.h\r\n-- Installing: /usr/local/include/libstokes/fts.h\r\n-- Installing: /usr/local/include/libstokes/grid.h\r\n-- Installing: /usr/local/include/libstokes/libstokes.h\r\n-- Installing: /usr/local/include/libstokes/lub-matrix.h\r\n-- Installing: /usr/local/include/libstokes/lub.h\r\n-- Installing: /usr/local/include/libstokes/matrix.h\r\n-- Installing: /usr/local/include/libstokes/memory-check.h\r\n-- Installing: /usr/local/include/libstokes/minv-poly.h\r\n-- Installing: /usr/local/include/libstokes/nitsol_c.h\r\n-- Installing: /usr/local/include/libstokes/noHI.h\r\n-- Installing: /usr/local/include/libstokes/non-ewald.h\r\n-- Installing: /usr/local/include/libstokes/ode-quaternion.h\r\n-- Installing: /usr/local/include/libstokes/ode.h\r\n-- Installing: /usr/local/include/libstokes/periodicity.h\r\n-- Installing: /usr/local/include/libstokes/stokes-guile.h\r\n-- Installing: /usr/local/include/libstokes/stokes-nc-read.h\r\n-- Installing: /usr/local/include/libstokes/stokes-nc.h\r\n-- Installing: /usr/local/include/libstokes/stokes.h\r\n-- Installing: /usr/local/include/libstokes/two-body-res.h\r\n-- Installing: /usr/local/include/libstokes/twobody-slip.h\r\n-- Installing: /usr/local/include/libstokes/twobody.h\r\n-- Installing: /usr/local/lib/libstokes.so\r\n-- Set runtime path of \"/usr/local/lib/libstokes.so\" to \"\"\r\n-- Installing: /usr/local/lib/python2.7/dist-packages/stokes/__init__.py\r\n-- Installing: /usr/local/lib/python2.7/dist-packages/stokes/stokes.py\r\n-- Installing: /usr/local/lib/python2.7/dist-packages/stokes/_stokes.so\r\nroot@阮竹恩:~/ryuon-cmake/build# cd ../stokes/src/\r\nroot@阮竹恩:~/ryuon-cmake/stokes/src# gcc -I/usr/local/include/libstokes -I/usr/local/include/libiter test-stokes.c -lstokes -lgsl -larpack -lnetcdf\r\nroot@阮竹恩:~/ryuon-cmake/stokes/src#\r\n\r\nThe next step is to use it.\r\n"}}
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