{"action":"created","issue":{"url":"https://api.github.com/repos/shahpr/RiboViz/issues/32","repository_url":"https://api.github.com/repos/shahpr/RiboViz","labels_url":"https://api.github.com/repos/shahpr/RiboViz/issues/32/labels{/name}","comments_url":"https://api.github.com/repos/shahpr/RiboViz/issues/32/comments","events_url":"https://api.github.com/repos/shahpr/RiboViz/issues/32/events","html_url":"https://github.com/shahpr/RiboViz/issues/32","id":313066217,"node_id":"MDU6SXNzdWUzMTMwNjYyMTc=","number":32,"title":"3nt periodicity appears to be broken","user":{"login":"ewallace","id":683603,"node_id":"MDQ6VXNlcjY4MzYwMw==","avatar_url":"https://avatars1.githubusercontent.com/u/683603?v=4","gravatar_id":"","url":"https://api.github.com/users/ewallace","html_url":"https://github.com/ewallace","followers_url":"https://api.github.com/users/ewallace/followers","following_url":"https://api.github.com/users/ewallace/following{/other_user}","gists_url":"https://api.github.com/users/ewallace/gists{/gist_id}","starred_url":"https://api.github.com/users/ewallace/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ewallace/subscriptions","organizations_url":"https://api.github.com/users/ewallace/orgs","repos_url":"https://api.github.com/users/ewallace/repos","events_url":"https://api.github.com/users/ewallace/events{/privacy}","received_events_url":"https://api.github.com/users/ewallace/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-04-10T19:52:54Z","updated_at":"2018-07-26T19:05:45Z","closed_at":null,"author_association":"COLLABORATOR","body":"In the latest version, 3' periodicity plots aren't looking right, e.g. when I run the vignette:\r\n\r\n[WTnone_3nt_periodicity.pdf](https://github.com/shahpr/RiboViz/files/1896192/WTnone_3nt_periodicity.pdf)\r\n\r\nI'm not sure where the problem is, but the bam/bedgraph files look fine, so something in bam_to_h5.R or a change in dependencies?"},"comment":{"url":"https://api.github.com/repos/shahpr/RiboViz/issues/comments/408202475","html_url":"https://github.com/shahpr/RiboViz/issues/32#issuecomment-408202475","issue_url":"https://api.github.com/repos/shahpr/RiboViz/issues/32","id":408202475,"node_id":"MDEyOklzc3VlQ29tbWVudDQwODIwMjQ3NQ==","user":{"login":"shahpr","id":3287508,"node_id":"MDQ6VXNlcjMyODc1MDg=","avatar_url":"https://avatars0.githubusercontent.com/u/3287508?v=4","gravatar_id":"","url":"https://api.github.com/users/shahpr","html_url":"https://github.com/shahpr","followers_url":"https://api.github.com/users/shahpr/followers","following_url":"https://api.github.com/users/shahpr/following{/other_user}","gists_url":"https://api.github.com/users/shahpr/gists{/gist_id}","starred_url":"https://api.github.com/users/shahpr/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/shahpr/subscriptions","organizations_url":"https://api.github.com/users/shahpr/orgs","repos_url":"https://api.github.com/users/shahpr/repos","events_url":"https://api.github.com/users/shahpr/events{/privacy}","received_events_url":"https://api.github.com/users/shahpr/received_events","type":"User","site_admin":false},"created_at":"2018-07-26T19:05:45Z","updated_at":"2018-07-26T19:05:45Z","author_association":"OWNER","body":"- Added functionality to specify a variable buffer size based on 5' and 3' UTR lengths.\r\n- The lengths are obtained from the GFF file generated using [script_for_transcript_annotation](https://github.com/shahpr/RiboViz/blob/master/scripts/script_for_transcript_annotation.Rmd)"}}
{"actor":{"display_login":"shahpr"}}