{"action":"created","issue":{"url":"https://api.github.com/repos/merenlab/anvio/issues/997","repository_url":"https://api.github.com/repos/merenlab/anvio","labels_url":"https://api.github.com/repos/merenlab/anvio/issues/997/labels{/name}","comments_url":"https://api.github.com/repos/merenlab/anvio/issues/997/comments","events_url":"https://api.github.com/repos/merenlab/anvio/issues/997/events","html_url":"https://github.com/merenlab/anvio/pull/997","id":364325604,"node_id":"MDExOlB1bGxSZXF1ZXN0MjE4NTM5NzM5","number":997,"title":"Exported gff3 files are now formatted correctly","user":{"login":"brymerr921","id":7491066,"node_id":"MDQ6VXNlcjc0OTEwNjY=","avatar_url":"https://avatars2.githubusercontent.com/u/7491066?v=4","gravatar_id":"","url":"https://api.github.com/users/brymerr921","html_url":"https://github.com/brymerr921","followers_url":"https://api.github.com/users/brymerr921/followers","following_url":"https://api.github.com/users/brymerr921/following{/other_user}","gists_url":"https://api.github.com/users/brymerr921/gists{/gist_id}","starred_url":"https://api.github.com/users/brymerr921/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/brymerr921/subscriptions","organizations_url":"https://api.github.com/users/brymerr921/orgs","repos_url":"https://api.github.com/users/brymerr921/repos","events_url":"https://api.github.com/users/brymerr921/events{/privacy}","received_events_url":"https://api.github.com/users/brymerr921/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-09-27T06:39:55Z","updated_at":"2018-09-27T18:09:32Z","closed_at":"2018-09-27T12:21:08Z","author_association":"CONTRIBUTOR","pull_request":{"url":"https://api.github.com/repos/merenlab/anvio/pulls/997","html_url":"https://github.com/merenlab/anvio/pull/997","diff_url":"https://github.com/merenlab/anvio/pull/997.diff","patch_url":"https://github.com/merenlab/anvio/pull/997.patch"},"body":"The files exported by `anvi-get-sequences-for-gene-calls -c CONTIGS.db --export-gff3` were incorrectly formatted.\r\nThis change addreses issues #551 and #554. See gff3 format at: https://uswest.ensembl.org/info/website/upload/gff3.html\r\nWithin the lines modified by this commit, ideally the second column (\"source\") would be populated by the gene caller (e.g. \"prodigal\") but I don't know how to make that change."},"comment":{"url":"https://api.github.com/repos/merenlab/anvio/issues/comments/425190317","html_url":"https://github.com/merenlab/anvio/pull/997#issuecomment-425190317","issue_url":"https://api.github.com/repos/merenlab/anvio/issues/997","id":425190317,"node_id":"MDEyOklzc3VlQ29tbWVudDQyNTE5MDMxNw==","user":{"login":"brymerr921","id":7491066,"node_id":"MDQ6VXNlcjc0OTEwNjY=","avatar_url":"https://avatars2.githubusercontent.com/u/7491066?v=4","gravatar_id":"","url":"https://api.github.com/users/brymerr921","html_url":"https://github.com/brymerr921","followers_url":"https://api.github.com/users/brymerr921/followers","following_url":"https://api.github.com/users/brymerr921/following{/other_user}","gists_url":"https://api.github.com/users/brymerr921/gists{/gist_id}","starred_url":"https://api.github.com/users/brymerr921/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/brymerr921/subscriptions","organizations_url":"https://api.github.com/users/brymerr921/orgs","repos_url":"https://api.github.com/users/brymerr921/repos","events_url":"https://api.github.com/users/brymerr921/events{/privacy}","received_events_url":"https://api.github.com/users/brymerr921/received_events","type":"User","site_admin":false},"created_at":"2018-09-27T18:09:32Z","updated_at":"2018-09-27T18:09:32Z","author_association":"CONTRIBUTOR","body":"Sounds great. I agree -- fine for now. Thank you!!!"}}
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