{"action":"created","comment":{"url":"https://api.github.com/repos/awild82/SSPINN/pulls/comments/173691141","pull_request_review_id":102919750,"id":173691141,"diff_hunk":"@@ -1,2 +1,32 @@\n-# SSPINN\n-Spectral Structure Prediction In Neural Networks\n+![SSPINN Logo](./docs/images/SSPINN_Logo.png)\n+\n+[![Build Status](https://travis-ci.org/awild82/SSPINN.svg?branch=master)](https://travis-ci.org/awild82/SSPINN)[![Coverage Status](https://coveralls.io/repos/github/awild82/SSPINN/badge.svg?branch=master)](https://coveralls.io/github/awild82/SSPINN?branch=master)\n+SSPINN is a software package meant to predict the structure of organic molecules based on experimentally obtained spectral data. Based on a user's input data, the SSPINN neural network will generate a connectivity matrix which predicts the bonding behavior between atoms in the user's molecule. This connectivity matrix will then be used to generate a graphical depiction of the predicted molecular structure. \n+\n+## Software Requirements\n+* [Python3](url)\n+* [Keras](url)\n+* [Networkx](url)\n+    \n+## Installation Instructions\n+1. Clone git repository\n+    *`git clone https://github.com/awild82/SSPINN.git`\n+2. Install SSPINN by running setup file\n+    *`./setup.sh`\n+    \n+## Structure Prediction\n+1. Format <sup>13</sup>C data according to template in `SSPINN/docs/specs/nn_input.md`\n+2. Save as .txt file in sspinn directory\n+3. In terminal, run `python -m sspinn <nmr file>`\n+\n+## Testing\n+1. Open SSPINN directory in terminal\n+2. Run `nosetests`\n+    * If nosetests is not already installed run `pip install nosetests`\n+    \n+## Training\n+\n+## Contributing\n+\n+## License Information\n+Do we need this since we are just using MIT?>","path":"README.md","position":34,"original_position":34,"commit_id":"f607c04384b34cd04ab3fdc770f964b2417659ec","original_commit_id":"f607c04384b34cd04ab3fdc770f964b2417659ec","user":{"login":"torinfs","id":20443896,"avatar_url":"https://avatars1.githubusercontent.com/u/20443896?v=4","gravatar_id":"","url":"https://api.github.com/users/torinfs","html_url":"https://github.com/torinfs","followers_url":"https://api.github.com/users/torinfs/followers","following_url":"https://api.github.com/users/torinfs/following{/other_user}","gists_url":"https://api.github.com/users/torinfs/gists{/gist_id}","starred_url":"https://api.github.com/users/torinfs/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/torinfs/subscriptions","organizations_url":"https://api.github.com/users/torinfs/orgs","repos_url":"https://api.github.com/users/torinfs/repos","events_url":"https://api.github.com/users/torinfs/events{/privacy}","received_events_url":"https://api.github.com/users/torinfs/received_events","type":"User","site_admin":false},"body":"Just say MIT and refer to the `LICENSE` file","created_at":"2018-03-12T04:06:09Z","updated_at":"2018-03-12T04:06:09Z","html_url":"https://github.com/awild82/SSPINN/pull/33#discussion_r173691141","pull_request_url":"https://api.github.com/repos/awild82/SSPINN/pulls/33","author_association":"COLLABORATOR","_links":{"self":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/comments/173691141"},"html":{"href":"https://github.com/awild82/SSPINN/pull/33#discussion_r173691141"},"pull_request":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/33"}}},"pull_request":{"url":"https://api.github.com/repos/awild82/SSPINN/pulls/33","id":174267929,"html_url":"https://github.com/awild82/SSPINN/pull/33","diff_url":"https://github.com/awild82/SSPINN/pull/33.diff","patch_url":"https://github.com/awild82/SSPINN/pull/33.patch","issue_url":"https://api.github.com/repos/awild82/SSPINN/issues/33","number":33,"state":"open","locked":false,"title":"Began detailing README","user":{"login":"ianamurphy","id":35091848,"avatar_url":"https://avatars3.githubusercontent.com/u/35091848?v=4","gravatar_id":"","url":"https://api.github.com/users/ianamurphy","html_url":"https://github.com/ianamurphy","followers_url":"https://api.github.com/users/ianamurphy/followers","following_url":"https://api.github.com/users/ianamurphy/following{/other_user}","gists_url":"https://api.github.com/users/ianamurphy/gists{/gist_id}","starred_url":"https://api.github.com/users/ianamurphy/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ianamurphy/subscriptions","organizations_url":"https://api.github.com/users/ianamurphy/orgs","repos_url":"https://api.github.com/users/ianamurphy/repos","events_url":"https://api.github.com/users/ianamurphy/events{/privacy}","received_events_url":"https://api.github.com/users/ianamurphy/received_events","type":"User","site_admin":false},"body":"Created images directory in /docs and added the SSPINN_Logo.png.\r\nLogo is still too big, but I will resize that in the next commit\r\n\r\nThere is still a lot missing from main README - mostly looking for feedback on what else is important to add and what is incorrect in this version.\r\n\r\nWill remove the jup. notebook used for drafting in the next commit.","created_at":"2018-03-12T03:59:57Z","updated_at":"2018-03-12T04:06:09Z","closed_at":null,"merged_at":null,"merge_commit_sha":"0feab1a5eca8f61198ac7a273a73457cca36f36a","assignee":null,"assignees":[],"requested_reviewers":[],"requested_teams":[],"labels":[],"milestone":null,"commits_url":"https://api.github.com/repos/awild82/SSPINN/pulls/33/commits","review_comments_url":"https://api.github.com/repos/awild82/SSPINN/pulls/33/comments","review_comment_url":"https://api.github.com/repos/awild82/SSPINN/pulls/comments{/number}","comments_url":"https://api.github.com/repos/awild82/SSPINN/issues/33/comments","statuses_url":"https://api.github.com/repos/awild82/SSPINN/statuses/f607c04384b34cd04ab3fdc770f964b2417659ec","head":{"label":"awild82:README_docs","ref":"README_docs","sha":"f607c04384b34cd04ab3fdc770f964b2417659ec","user":{"login":"awild82","id":24899412,"avatar_url":"https://avatars3.githubusercontent.com/u/24899412?v=4","gravatar_id":"","url":"https://api.github.com/users/awild82","html_url":"https://github.com/awild82","followers_url":"https://api.github.com/users/awild82/followers","following_url":"https://api.github.com/users/awild82/following{/other_user}","gists_url":"https://api.github.com/users/awild82/gists{/gist_id}","starred_url":"https://api.github.com/users/awild82/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/awild82/subscriptions","organizations_url":"https://api.github.com/users/awild82/orgs","repos_url":"https://api.github.com/users/awild82/repos","events_url":"https://api.github.com/users/awild82/events{/privacy}","received_events_url":"https://api.github.com/users/awild82/received_events","type":"User","site_admin":false},"repo":{"id":121447651,"name":"SSPINN","full_name":"awild82/SSPINN","owner":{"login":"awild82","id":24899412,"avatar_url":"https://avatars3.githubusercontent.com/u/24899412?v=4","gravatar_id":"","url":"https://api.github.com/users/awild82","html_url":"https://github.com/awild82","followers_url":"https://api.github.com/users/awild82/followers","following_url":"https://api.github.com/users/awild82/following{/other_user}","gists_url":"https://api.github.com/users/awild82/gists{/gist_id}","starred_url":"https://api.github.com/users/awild82/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/awild82/subscriptions","organizations_url":"https://api.github.com/users/awild82/orgs","repos_url":"https://api.github.com/users/awild82/repos","events_url":"https://api.github.com/users/awild82/events{/privacy}","received_events_url":"https://api.github.com/users/awild82/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/awild82/SSPINN","description":"Spectral Structure Prediction In Neural Networks","fork":false,"url":"https://api.github.com/repos/awild82/SSPINN","forks_url":"https://api.github.com/repos/awild82/SSPINN/forks","keys_url":"https://api.github.com/repos/awild82/SSPINN/keys{/key_id}","collaborators_url":"https://api.github.com/repos/awild82/SSPINN/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/awild82/SSPINN/teams","hooks_url":"https://api.github.com/repos/awild82/SSPINN/hooks","issue_events_url":"https://api.github.com/repos/awild82/SSPINN/issues/events{/number}","events_url":"https://api.github.com/repos/awild82/SSPINN/events","assignees_url":"https://api.github.com/repos/awild82/SSPINN/assignees{/user}","branches_url":"https://api.github.com/repos/awild82/SSPINN/branches{/branch}","tags_url":"https://api.github.com/repos/awild82/SSPINN/tags","blobs_url":"https://api.github.com/repos/awild82/SSPINN/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/awild82/SSPINN/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/awild82/SSPINN/git/refs{/sha}","trees_url":"https://api.github.com/repos/awild82/SSPINN/git/trees{/sha}","statuses_url":"https://api.github.com/repos/awild82/SSPINN/statuses/{sha}","languages_url":"https://api.github.com/repos/awild82/SSPINN/languages","stargazers_url":"https://api.github.com/repos/awild82/SSPINN/stargazers","contributors_url":"https://api.github.com/repos/awild82/SSPINN/contributors","subscribers_url":"https://api.github.com/repos/awild82/SSPINN/subscribers","subscription_url":"https://api.github.com/repos/awild82/SSPINN/subscription","commits_url":"https://api.github.com/repos/awild82/SSPINN/commits{/sha}","git_commits_url":"https://api.github.com/repos/awild82/SSPINN/git/commits{/sha}","comments_url":"https://api.github.com/repos/awild82/SSPINN/comments{/number}","issue_comment_url":"https://api.github.com/repos/awild82/SSPINN/issues/comments{/number}","contents_url":"https://api.github.com/repos/awild82/SSPINN/contents/{+path}","compare_url":"https://api.github.com/repos/awild82/SSPINN/compare/{base}...{head}","merges_url":"https://api.github.com/repos/awild82/SSPINN/merges","archive_url":"https://api.github.com/repos/awild82/SSPINN/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/awild82/SSPINN/downloads","issues_url":"https://api.github.com/repos/awild82/SSPINN/issues{/number}","pulls_url":"https://api.github.com/repos/awild82/SSPINN/pulls{/number}","milestones_url":"https://api.github.com/repos/awild82/SSPINN/milestones{/number}","notifications_url":"https://api.github.com/repos/awild82/SSPINN/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/awild82/SSPINN/labels{/name}","releases_url":"https://api.github.com/repos/awild82/SSPINN/releases{/id}","deployments_url":"https://api.github.com/repos/awild82/SSPINN/deployments","created_at":"2018-02-13T23:10:40Z","updated_at":"2018-02-21T05:53:05Z","pushed_at":"2018-03-12T03:59:58Z","git_url":"git://github.com/awild82/SSPINN.git","ssh_url":"git@github.com:awild82/SSPINN.git","clone_url":"https://github.com/awild82/SSPINN.git","svn_url":"https://github.com/awild82/SSPINN","homepage":null,"size":23346,"stargazers_count":0,"watchers_count":0,"language":"Python","has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":4,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit"},"forks":0,"open_issues":4,"watchers":0,"default_branch":"master"}},"base":{"label":"awild82:master","ref":"master","sha":"124be4052cc80fbc7155df7c082de13e233bdc63","user":{"login":"awild82","id":24899412,"avatar_url":"https://avatars3.githubusercontent.com/u/24899412?v=4","gravatar_id":"","url":"https://api.github.com/users/awild82","html_url":"https://github.com/awild82","followers_url":"https://api.github.com/users/awild82/followers","following_url":"https://api.github.com/users/awild82/following{/other_user}","gists_url":"https://api.github.com/users/awild82/gists{/gist_id}","starred_url":"https://api.github.com/users/awild82/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/awild82/subscriptions","organizations_url":"https://api.github.com/users/awild82/orgs","repos_url":"https://api.github.com/users/awild82/repos","events_url":"https://api.github.com/users/awild82/events{/privacy}","received_events_url":"https://api.github.com/users/awild82/received_events","type":"User","site_admin":false},"repo":{"id":121447651,"name":"SSPINN","full_name":"awild82/SSPINN","owner":{"login":"awild82","id":24899412,"avatar_url":"https://avatars3.githubusercontent.com/u/24899412?v=4","gravatar_id":"","url":"https://api.github.com/users/awild82","html_url":"https://github.com/awild82","followers_url":"https://api.github.com/users/awild82/followers","following_url":"https://api.github.com/users/awild82/following{/other_user}","gists_url":"https://api.github.com/users/awild82/gists{/gist_id}","starred_url":"https://api.github.com/users/awild82/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/awild82/subscriptions","organizations_url":"https://api.github.com/users/awild82/orgs","repos_url":"https://api.github.com/users/awild82/repos","events_url":"https://api.github.com/users/awild82/events{/privacy}","received_events_url":"https://api.github.com/users/awild82/received_events","type":"User","site_admin":false},"private":false,"html_url":"https://github.com/awild82/SSPINN","description":"Spectral Structure Prediction In Neural Networks","fork":false,"url":"https://api.github.com/repos/awild82/SSPINN","forks_url":"https://api.github.com/repos/awild82/SSPINN/forks","keys_url":"https://api.github.com/repos/awild82/SSPINN/keys{/key_id}","collaborators_url":"https://api.github.com/repos/awild82/SSPINN/collaborators{/collaborator}","teams_url":"https://api.github.com/repos/awild82/SSPINN/teams","hooks_url":"https://api.github.com/repos/awild82/SSPINN/hooks","issue_events_url":"https://api.github.com/repos/awild82/SSPINN/issues/events{/number}","events_url":"https://api.github.com/repos/awild82/SSPINN/events","assignees_url":"https://api.github.com/repos/awild82/SSPINN/assignees{/user}","branches_url":"https://api.github.com/repos/awild82/SSPINN/branches{/branch}","tags_url":"https://api.github.com/repos/awild82/SSPINN/tags","blobs_url":"https://api.github.com/repos/awild82/SSPINN/git/blobs{/sha}","git_tags_url":"https://api.github.com/repos/awild82/SSPINN/git/tags{/sha}","git_refs_url":"https://api.github.com/repos/awild82/SSPINN/git/refs{/sha}","trees_url":"https://api.github.com/repos/awild82/SSPINN/git/trees{/sha}","statuses_url":"https://api.github.com/repos/awild82/SSPINN/statuses/{sha}","languages_url":"https://api.github.com/repos/awild82/SSPINN/languages","stargazers_url":"https://api.github.com/repos/awild82/SSPINN/stargazers","contributors_url":"https://api.github.com/repos/awild82/SSPINN/contributors","subscribers_url":"https://api.github.com/repos/awild82/SSPINN/subscribers","subscription_url":"https://api.github.com/repos/awild82/SSPINN/subscription","commits_url":"https://api.github.com/repos/awild82/SSPINN/commits{/sha}","git_commits_url":"https://api.github.com/repos/awild82/SSPINN/git/commits{/sha}","comments_url":"https://api.github.com/repos/awild82/SSPINN/comments{/number}","issue_comment_url":"https://api.github.com/repos/awild82/SSPINN/issues/comments{/number}","contents_url":"https://api.github.com/repos/awild82/SSPINN/contents/{+path}","compare_url":"https://api.github.com/repos/awild82/SSPINN/compare/{base}...{head}","merges_url":"https://api.github.com/repos/awild82/SSPINN/merges","archive_url":"https://api.github.com/repos/awild82/SSPINN/{archive_format}{/ref}","downloads_url":"https://api.github.com/repos/awild82/SSPINN/downloads","issues_url":"https://api.github.com/repos/awild82/SSPINN/issues{/number}","pulls_url":"https://api.github.com/repos/awild82/SSPINN/pulls{/number}","milestones_url":"https://api.github.com/repos/awild82/SSPINN/milestones{/number}","notifications_url":"https://api.github.com/repos/awild82/SSPINN/notifications{?since,all,participating}","labels_url":"https://api.github.com/repos/awild82/SSPINN/labels{/name}","releases_url":"https://api.github.com/repos/awild82/SSPINN/releases{/id}","deployments_url":"https://api.github.com/repos/awild82/SSPINN/deployments","created_at":"2018-02-13T23:10:40Z","updated_at":"2018-02-21T05:53:05Z","pushed_at":"2018-03-12T03:59:58Z","git_url":"git://github.com/awild82/SSPINN.git","ssh_url":"git@github.com:awild82/SSPINN.git","clone_url":"https://github.com/awild82/SSPINN.git","svn_url":"https://github.com/awild82/SSPINN","homepage":null,"size":23346,"stargazers_count":0,"watchers_count":0,"language":"Python","has_issues":true,"has_projects":true,"has_downloads":true,"has_wiki":true,"has_pages":false,"forks_count":0,"mirror_url":null,"archived":false,"open_issues_count":4,"license":{"key":"mit","name":"MIT License","spdx_id":"MIT","url":"https://api.github.com/licenses/mit"},"forks":0,"open_issues":4,"watchers":0,"default_branch":"master"}},"_links":{"self":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/33"},"html":{"href":"https://github.com/awild82/SSPINN/pull/33"},"issue":{"href":"https://api.github.com/repos/awild82/SSPINN/issues/33"},"comments":{"href":"https://api.github.com/repos/awild82/SSPINN/issues/33/comments"},"review_comments":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/33/comments"},"review_comment":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/comments{/number}"},"commits":{"href":"https://api.github.com/repos/awild82/SSPINN/pulls/33/commits"},"statuses":{"href":"https://api.github.com/repos/awild82/SSPINN/statuses/f607c04384b34cd04ab3fdc770f964b2417659ec"}},"author_association":"COLLABORATOR"}}
{"actor":{"display_login":"torinfs"}}