{"action":"created","issue":{"url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/44","repository_url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock","labels_url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/44/labels{/name}","comments_url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/44/comments","events_url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/44/events","html_url":"https://github.com/conda-forge/netcdf4-feedstock/issues/44","id":312052146,"number":44,"title":"Runtime segmentation fault using conda-forge netcdf4","user":{"login":"ngoldbaum","id":3126246,"avatar_url":"https://avatars2.githubusercontent.com/u/3126246?v=4","gravatar_id":"","url":"https://api.github.com/users/ngoldbaum","html_url":"https://github.com/ngoldbaum","followers_url":"https://api.github.com/users/ngoldbaum/followers","following_url":"https://api.github.com/users/ngoldbaum/following{/other_user}","gists_url":"https://api.github.com/users/ngoldbaum/gists{/gist_id}","starred_url":"https://api.github.com/users/ngoldbaum/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ngoldbaum/subscriptions","organizations_url":"https://api.github.com/users/ngoldbaum/orgs","repos_url":"https://api.github.com/users/ngoldbaum/repos","events_url":"https://api.github.com/users/ngoldbaum/events{/privacy}","received_events_url":"https://api.github.com/users/ngoldbaum/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":0,"created_at":"2018-04-06T17:15:22Z","updated_at":"2018-04-06T18:46:59Z","closed_at":null,"author_association":"NONE","body":"When I try to run the following script using conda-forge's linux-64 netcdf4 1.3.1 build (`1.3.1-py36_2`):\r\n\r\n```\r\n>>> from netCDF4 import Dataset\r\n>>> Dataset('galaxy_hdf5_plt_cnt_0000')\r\n```\r\n\r\nI get the following error:\r\n\r\n```\r\npython: /feedstock_root/build_artefacts/libnetcdf_1510148087952/work/netcdf-c-4.5.0/libsrc4/nc4var.c:367: nc4_vararray_add: Assertion `var->varid == grp->vars.nelems' failed.\r\n```\r\n\r\nThe same does not happen with the netcdf4 1.3.1 build from defaults (`1.3.1-py36hfd655bd_2`).\r\n\r\nThe file is available here (warning, 3 GB): http://use.yt/upload/2d8304c6\r\n\r\nYou can download it like this: `curl -JO http://use.yt/upload/2d8304c6`, which will save a file named `memory_error_example_yt.tar`.\r\n\r\nUnfortunately I did not produce this file, it was produced by a yt user who reported a different error but hapenned to run into this netcdf4 error while trying to reproduce their original error."},"comment":{"url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/comments/379342964","html_url":"https://github.com/conda-forge/netcdf4-feedstock/issues/44#issuecomment-379342964","issue_url":"https://api.github.com/repos/conda-forge/netcdf4-feedstock/issues/44","id":379342964,"user":{"login":"ocefpaf","id":950575,"avatar_url":"https://avatars1.githubusercontent.com/u/950575?v=4","gravatar_id":"","url":"https://api.github.com/users/ocefpaf","html_url":"https://github.com/ocefpaf","followers_url":"https://api.github.com/users/ocefpaf/followers","following_url":"https://api.github.com/users/ocefpaf/following{/other_user}","gists_url":"https://api.github.com/users/ocefpaf/gists{/gist_id}","starred_url":"https://api.github.com/users/ocefpaf/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ocefpaf/subscriptions","organizations_url":"https://api.github.com/users/ocefpaf/orgs","repos_url":"https://api.github.com/users/ocefpaf/repos","events_url":"https://api.github.com/users/ocefpaf/events{/privacy}","received_events_url":"https://api.github.com/users/ocefpaf/received_events","type":"User","site_admin":false},"created_at":"2018-04-06T18:46:59Z","updated_at":"2018-04-06T18:46:59Z","author_association":"OWNER","body":"@dopplershift do you have an idea of what may be going on here?"}}
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