{"action":"created","issue":{"url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/22","repository_url":"https://api.github.com/repos/databio/dnameth_pipelines","labels_url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/22/labels{/name}","comments_url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/22/comments","events_url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/22/events","html_url":"https://github.com/databio/dnameth_pipelines/issues/22","id":380322571,"node_id":"MDU6SXNzdWUzODAzMjI1NzE=","number":22,"title":"Tool naming","user":{"login":"vreuter","id":12036370,"node_id":"MDQ6VXNlcjEyMDM2Mzcw","avatar_url":"https://avatars1.githubusercontent.com/u/12036370?v=4","gravatar_id":"","url":"https://api.github.com/users/vreuter","html_url":"https://github.com/vreuter","followers_url":"https://api.github.com/users/vreuter/followers","following_url":"https://api.github.com/users/vreuter/following{/other_user}","gists_url":"https://api.github.com/users/vreuter/gists{/gist_id}","starred_url":"https://api.github.com/users/vreuter/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/vreuter/subscriptions","organizations_url":"https://api.github.com/users/vreuter/orgs","repos_url":"https://api.github.com/users/vreuter/repos","events_url":"https://api.github.com/users/vreuter/events{/privacy}","received_events_url":"https://api.github.com/users/vreuter/received_events","type":"User","site_admin":false},"labels":[{"id":621768339,"node_id":"MDU6TGFiZWw2MjE3NjgzMzk=","url":"https://api.github.com/repos/databio/dnameth_pipelines/labels/question","name":"question","color":"cc317c","default":true}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":1,"created_at":"2018-11-13T16:50:13Z","updated_at":"2018-11-14T02:30:20Z","closed_at":null,"author_association":"MEMBER","body":"Why does a script for which the name suggests RNA run here? What's this tool do?\r\n```\r\n`python /sfs/qumulo/qhome/vpr9v/code/dnameth_pipelines/src/tools/bisulfiteReadFiltering_forRNA.py\r\n```"},"comment":{"url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/comments/438514917","html_url":"https://github.com/databio/dnameth_pipelines/issues/22#issuecomment-438514917","issue_url":"https://api.github.com/repos/databio/dnameth_pipelines/issues/22","id":438514917,"node_id":"MDEyOklzc3VlQ29tbWVudDQzODUxNDkxNw==","user":{"login":"jklughammer","id":4631262,"node_id":"MDQ6VXNlcjQ2MzEyNjI=","avatar_url":"https://avatars1.githubusercontent.com/u/4631262?v=4","gravatar_id":"","url":"https://api.github.com/users/jklughammer","html_url":"https://github.com/jklughammer","followers_url":"https://api.github.com/users/jklughammer/followers","following_url":"https://api.github.com/users/jklughammer/following{/other_user}","gists_url":"https://api.github.com/users/jklughammer/gists{/gist_id}","starred_url":"https://api.github.com/users/jklughammer/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jklughammer/subscriptions","organizations_url":"https://api.github.com/users/jklughammer/orgs","repos_url":"https://api.github.com/users/jklughammer/repos","events_url":"https://api.github.com/users/jklughammer/events{/privacy}","received_events_url":"https://api.github.com/users/jklughammer/received_events","type":"User","site_admin":false},"created_at":"2018-11-14T02:30:20Z","updated_at":"2018-11-14T02:30:20Z","author_association":"NONE","body":"yeah, we created this for the core-seq protocol, which was supposed to assesses DNA methylation and RNA   in the same sequencing library. In RNA mode this script was supposed to identify the reads that originated from RNA. I guess it is not really needed in a standard DNA methylation pipeline. "}}
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