{"action":"created","issue":{"url":"https://api.github.com/repos/dzerbino/oases/issues/10","repository_url":"https://api.github.com/repos/dzerbino/oases","labels_url":"https://api.github.com/repos/dzerbino/oases/issues/10/labels{/name}","comments_url":"https://api.github.com/repos/dzerbino/oases/issues/10/comments","events_url":"https://api.github.com/repos/dzerbino/oases/issues/10/events","html_url":"https://github.com/dzerbino/oases/issues/10","id":161129925,"number":10,"title":"AssertionError: Oases failed at k = 25","user":{"login":"Peajee","id":10958930,"avatar_url":"https://avatars.githubusercontent.com/u/10958930?v=3","gravatar_id":"","url":"https://api.github.com/users/Peajee","html_url":"https://github.com/Peajee","followers_url":"https://api.github.com/users/Peajee/followers","following_url":"https://api.github.com/users/Peajee/following{/other_user}","gists_url":"https://api.github.com/users/Peajee/gists{/gist_id}","starred_url":"https://api.github.com/users/Peajee/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Peajee/subscriptions","organizations_url":"https://api.github.com/users/Peajee/orgs","repos_url":"https://api.github.com/users/Peajee/repos","events_url":"https://api.github.com/users/Peajee/events{/privacy}","received_events_url":"https://api.github.com/users/Peajee/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":1,"created_at":"2016-06-20T07:09:52Z","updated_at":"2016-06-23T08:30:43Z","closed_at":null,"body":"I have a Problem with Oases and could not find anything helpful anywhere else. That is why I am reporting my problem here. Please forgive me, if this is the wrong place to ask or I have simply overlooked something very simple.\r\n\r\n**When running the following command:**\r\npython /home/user/oases/scripts/oases_pipeline.py -m 25 -M 35 -s 4 -o oases -d ' -shortPaired -separate -fastq /work/user/All_Samples/12m/data_1.fq /work/user/All_Samples/12m/data_2.fq' -p '-min_trans_lgth 300'\r\n\r\n**I get this error:**\r\n\r\nTraceback (most recent call last):\r\n  File \"/home/user/oases/scripts/oases_pipeline.py\", line 130, in <module>\r\n    main()\r\n  File \"/home/user/oases/scripts/oases_pipeline.py\", line 124, in main\r\n    singleKAssemblies(options)\r\n  File \"/home/user/oases/scripts/oases_pipeline.py\", line 55, in singleKAsse$\r\n    assert p.returncode == 0, \"Oases failed at k = %i\\n%s\" % (k, output[0])\r\nAssertionError: Oases failed at k = 25\r\n\r\nI can not make heads or tails of it. What is the Problem here?"},"comment":{"url":"https://api.github.com/repos/dzerbino/oases/issues/comments/227983867","html_url":"https://github.com/dzerbino/oases/issues/10#issuecomment-227983867","issue_url":"https://api.github.com/repos/dzerbino/oases/issues/10","id":227983867,"user":{"login":"dzerbino","id":33239,"avatar_url":"https://avatars.githubusercontent.com/u/33239?v=3","gravatar_id":"","url":"https://api.github.com/users/dzerbino","html_url":"https://github.com/dzerbino","followers_url":"https://api.github.com/users/dzerbino/followers","following_url":"https://api.github.com/users/dzerbino/following{/other_user}","gists_url":"https://api.github.com/users/dzerbino/gists{/gist_id}","starred_url":"https://api.github.com/users/dzerbino/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/dzerbino/subscriptions","organizations_url":"https://api.github.com/users/dzerbino/orgs","repos_url":"https://api.github.com/users/dzerbino/repos","events_url":"https://api.github.com/users/dzerbino/events{/privacy}","received_events_url":"https://api.github.com/users/dzerbino/received_events","type":"User","site_admin":false},"created_at":"2016-06-23T08:30:43Z","updated_at":"2016-06-23T08:30:43Z","body":"Could you please print out the entire stderr output?\r\n\r\nThank you,\r\n\r\nDaniel"}}
{"actor":{"display_login":"dzerbino"}}