{"action":"closed","issue":{"url":"https://api.github.com/repos/geneontology/go-ontology/issues/10740","repository_url":"https://api.github.com/repos/geneontology/go-ontology","labels_url":"https://api.github.com/repos/geneontology/go-ontology/issues/10740/labels{/name}","comments_url":"https://api.github.com/repos/geneontology/go-ontology/issues/10740/comments","events_url":"https://api.github.com/repos/geneontology/go-ontology/issues/10740/events","html_url":"https://github.com/geneontology/go-ontology/issues/10740","id":97264622,"number":10740,"title":"Cilia: new terms and links - cellular component branch","user":{"login":"gocentral","id":12972975,"avatar_url":"https://avatars.githubusercontent.com/u/12972975?v=3","gravatar_id":"","url":"https://api.github.com/users/gocentral","html_url":"https://github.com/gocentral","followers_url":"https://api.github.com/users/gocentral/followers","following_url":"https://api.github.com/users/gocentral/following{/other_user}","gists_url":"https://api.github.com/users/gocentral/gists{/gist_id}","starred_url":"https://api.github.com/users/gocentral/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/gocentral/subscriptions","organizations_url":"https://api.github.com/users/gocentral/orgs","repos_url":"https://api.github.com/users/gocentral/repos","events_url":"https://api.github.com/users/gocentral/events{/privacy}","received_events_url":"https://api.github.com/users/gocentral/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/auto-migrated","name":"auto-migrated","color":"ededed"},{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/Cilia/flagella","name":"Cilia/flagella","color":"bfd4f2"},{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/mini-project","name":"mini-project","color":"ededed"},{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/New%20term%20request","name":"New term request","color":"bfe5bf"},{"url":"https://api.github.com/repos/geneontology/go-ontology/labels/Other%20term-related%20request","name":"Other term-related request","color":"bfe5bf"}],"state":"closed","locked":false,"assignee":{"login":"paolaroncaglia","id":4982516,"avatar_url":"https://avatars.githubusercontent.com/u/4982516?v=3","gravatar_id":"","url":"https://api.github.com/users/paolaroncaglia","html_url":"https://github.com/paolaroncaglia","followers_url":"https://api.github.com/users/paolaroncaglia/followers","following_url":"https://api.github.com/users/paolaroncaglia/following{/other_user}","gists_url":"https://api.github.com/users/paolaroncaglia/gists{/gist_id}","starred_url":"https://api.github.com/users/paolaroncaglia/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/paolaroncaglia/subscriptions","organizations_url":"https://api.github.com/users/paolaroncaglia/orgs","repos_url":"https://api.github.com/users/paolaroncaglia/repos","events_url":"https://api.github.com/users/paolaroncaglia/events{/privacy}","received_events_url":"https://api.github.com/users/paolaroncaglia/received_events","type":"User","site_admin":false},"milestone":null,"comments":75,"created_at":"2013-12-03T13:10:58Z","updated_at":"2016-06-06T12:58:47Z","closed_at":"2016-06-06T12:58:47Z","body":"We are in contact with John van Dam, Toby Gibson and colleagues to add/revise terms related to cilia (CC and BP). Here is a first list of suggested edits from John:\r\n\r\n\"...In the end I've removed a lot of terms from my list because I found out they already existed as part of the axoneme term, which itself was not connected to the cilium. I've missed these terms using the graphical viewer in OBO-edit. Please find attached an excel file with the new terms, a short definition, reference data and relationships. I've also added some new connections for existing terms as well as identified some issues that need some rewiring of the terms.\r\nI am sure that in terms of is_a and part_of relationships there are more issues to solve. I will try and figure those out this December, as well as figure out the biological processes part. One of these things is the fact that some terms define areas through which other components cross, like \"ciliary transition zone\" and \"axoneme\", in the excel file I've made \"axoneme\" part_of \"ciliary transition zone\", but I'm not quite sure if it is the way to go.\"\r\n\r\nThe excel file is called \"New GO terms - Nov2013\" and is attached.\r\n\r\nPaola\n\nReported by: paolaroncaglia\n\nOriginal Ticket: [geneontology/ontology-requests/10553](https://sourceforge.net/p/geneontology/ontology-requests/10553)"}}
{"actor":{"display_login":"paolaroncaglia"}}