{"action":"created","issue":{"url":"https://api.github.com/repos/galaxyproject/galaxy/issues/2349","repository_url":"https://api.github.com/repos/galaxyproject/galaxy","labels_url":"https://api.github.com/repos/galaxyproject/galaxy/issues/2349/labels{/name}","comments_url":"https://api.github.com/repos/galaxyproject/galaxy/issues/2349/comments","events_url":"https://api.github.com/repos/galaxyproject/galaxy/issues/2349/events","html_url":"https://github.com/galaxyproject/galaxy/issues/2349","id":154501333,"number":2349,"title":"Conda path too long for placeholders","user":{"login":"abretaud","id":238755,"avatar_url":"https://avatars.githubusercontent.com/u/238755?v=3","gravatar_id":"","url":"https://api.github.com/users/abretaud","html_url":"https://github.com/abretaud","followers_url":"https://api.github.com/users/abretaud/followers","following_url":"https://api.github.com/users/abretaud/following{/other_user}","gists_url":"https://api.github.com/users/abretaud/gists{/gist_id}","starred_url":"https://api.github.com/users/abretaud/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/abretaud/subscriptions","organizations_url":"https://api.github.com/users/abretaud/orgs","repos_url":"https://api.github.com/users/abretaud/repos","events_url":"https://api.github.com/users/abretaud/events{/privacy}","received_events_url":"https://api.github.com/users/abretaud/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":4,"created_at":"2016-05-12T14:46:53Z","updated_at":"2016-05-12T16:06:11Z","closed_at":null,"body":"I tried activating the conda dependency resolver on our galaxy prod server, but I had to disable it because I encountered this kind of error (testing with trinity IUC tool):\r\n\r\n`ERROR: placeholder '/root/miniconda3/envs/_build_placehold_placehold_placehold_placehold_placehold_p' too short in: ncurses-5.9-4`\r\n\r\nIt seems to happen because the jobs conda-env path can be very long if galaxy itself is installed in a long path, for example:\r\n/some-very/long_path/galaxy-dist/database/job_working_directory/032/32135/conda-env/bin/ = 88 chars = too long compared to the 80 chars placeholder\r\n\r\nI found a conda issue for it there: https://github.com/conda/conda-build/pull/877\r\n\r\nI don't know if there's anything that can be done for it on the galaxy side, but I create this issue just in case someone would encounter the same problem"},"comment":{"url":"https://api.github.com/repos/galaxyproject/galaxy/issues/comments/218805147","html_url":"https://github.com/galaxyproject/galaxy/issues/2349#issuecomment-218805147","issue_url":"https://api.github.com/repos/galaxyproject/galaxy/issues/2349","id":218805147,"user":{"login":"bgruening","id":469983,"avatar_url":"https://avatars.githubusercontent.com/u/469983?v=3","gravatar_id":"","url":"https://api.github.com/users/bgruening","html_url":"https://github.com/bgruening","followers_url":"https://api.github.com/users/bgruening/followers","following_url":"https://api.github.com/users/bgruening/following{/other_user}","gists_url":"https://api.github.com/users/bgruening/gists{/gist_id}","starred_url":"https://api.github.com/users/bgruening/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/bgruening/subscriptions","organizations_url":"https://api.github.com/users/bgruening/orgs","repos_url":"https://api.github.com/users/bgruening/repos","events_url":"https://api.github.com/users/bgruening/events{/privacy}","received_events_url":"https://api.github.com/users/bgruening/received_events","type":"User","site_admin":false},"created_at":"2016-05-12T16:06:11Z","updated_at":"2016-05-12T16:06:11Z","body":"@abretaud are you using the object-store? You can set the job_working directory to something else then this long path."}}