{"action":"closed","issue":{"url":"https://api.github.com/repos/kaspermarstal/SimpleElastix/issues/56","repository_url":"https://api.github.com/repos/kaspermarstal/SimpleElastix","labels_url":"https://api.github.com/repos/kaspermarstal/SimpleElastix/issues/56/labels{/name}","comments_url":"https://api.github.com/repos/kaspermarstal/SimpleElastix/issues/56/comments","events_url":"https://api.github.com/repos/kaspermarstal/SimpleElastix/issues/56/events","html_url":"https://github.com/kaspermarstal/SimpleElastix/issues/56","id":184392771,"number":56,"title":"Elastix output in stdout buffer upon transforming with sitk.Transformix()","user":{"login":"pskeshu","id":7001840,"avatar_url":"https://avatars.githubusercontent.com/u/7001840?v=3","gravatar_id":"","url":"https://api.github.com/users/pskeshu","html_url":"https://github.com/pskeshu","followers_url":"https://api.github.com/users/pskeshu/followers","following_url":"https://api.github.com/users/pskeshu/following{/other_user}","gists_url":"https://api.github.com/users/pskeshu/gists{/gist_id}","starred_url":"https://api.github.com/users/pskeshu/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pskeshu/subscriptions","organizations_url":"https://api.github.com/users/pskeshu/orgs","repos_url":"https://api.github.com/users/pskeshu/repos","events_url":"https://api.github.com/users/pskeshu/events{/privacy}","received_events_url":"https://api.github.com/users/pskeshu/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2016-10-21T03:40:30Z","updated_at":"2016-10-21T07:19:14Z","closed_at":"2016-10-21T07:19:14Z","body":"When I am wrapping a population of images using Transformix(), it prints the following output for each image:\r\n\r\n```\r\nELASTIX version: 4.801\r\nCommand line options from ElastixBase:\r\n-out      ./\r\n-threads  unspecified, so all available threads are used\r\n-def      unspecified, so no input points transformed\r\n-jac      unspecified, so no det(dT/dx) computed\r\n-jacmat   unspecified, so no dT/dx computed\r\n\r\nReading input image ...\r\n  Reading input image took 0.000002 s\r\nCalling all ReadFromFile()'s ...\r\n  Calling all ReadFromFile()'s took 0.000045 s\r\nTransforming points ...\r\n  The command-line option \"-def\" is not used, so no points are transformed\r\n  Transforming points done, it took 0.00s\r\nCompute determinant of spatial Jacobian ...\r\n  The command-line option \"-jac\" is not used, so no det(dT/dx) computed.\r\n  Computing determinant of spatial Jacobian done, it took 0.00s\r\nCompute spatial Jacobian (full matrix) ...\r\n  The command-line option \"-jacmat\" is not used, so no dT/dx computed.\r\n  Computing spatial Jacobian done, it took 0.00s\r\nResampling image and writing to disk ...\r\n  Resampling took 0.19s\r\n```\r\nIs this a known issue? Is there any way to suppress this?"}}
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