{"action":"created","issue":{"url":"https://api.github.com/repos/broadinstitute/gatk/issues/2185","repository_url":"https://api.github.com/repos/broadinstitute/gatk","labels_url":"https://api.github.com/repos/broadinstitute/gatk/issues/2185/labels{/name}","comments_url":"https://api.github.com/repos/broadinstitute/gatk/issues/2185/comments","events_url":"https://api.github.com/repos/broadinstitute/gatk/issues/2185/events","html_url":"https://github.com/broadinstitute/gatk/pull/2185","id":178930119,"number":2185,"title":"Eliminate the deprecated PerReadAlleleLikelihoodMap.  Closes #1467.","user":{"login":"davidbenjamin","id":8438890,"avatar_url":"https://avatars.githubusercontent.com/u/8438890?v=3","gravatar_id":"","url":"https://api.github.com/users/davidbenjamin","html_url":"https://github.com/davidbenjamin","followers_url":"https://api.github.com/users/davidbenjamin/followers","following_url":"https://api.github.com/users/davidbenjamin/following{/other_user}","gists_url":"https://api.github.com/users/davidbenjamin/gists{/gist_id}","starred_url":"https://api.github.com/users/davidbenjamin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/davidbenjamin/subscriptions","organizations_url":"https://api.github.com/users/davidbenjamin/orgs","repos_url":"https://api.github.com/users/davidbenjamin/repos","events_url":"https://api.github.com/users/davidbenjamin/events{/privacy}","received_events_url":"https://api.github.com/users/davidbenjamin/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":{"login":"ldgauthier","id":6578548,"avatar_url":"https://avatars.githubusercontent.com/u/6578548?v=3","gravatar_id":"","url":"https://api.github.com/users/ldgauthier","html_url":"https://github.com/ldgauthier","followers_url":"https://api.github.com/users/ldgauthier/followers","following_url":"https://api.github.com/users/ldgauthier/following{/other_user}","gists_url":"https://api.github.com/users/ldgauthier/gists{/gist_id}","starred_url":"https://api.github.com/users/ldgauthier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ldgauthier/subscriptions","organizations_url":"https://api.github.com/users/ldgauthier/orgs","repos_url":"https://api.github.com/users/ldgauthier/repos","events_url":"https://api.github.com/users/ldgauthier/events{/privacy}","received_events_url":"https://api.github.com/users/ldgauthier/received_events","type":"User","site_admin":false},"assignees":[{"login":"ldgauthier","id":6578548,"avatar_url":"https://avatars.githubusercontent.com/u/6578548?v=3","gravatar_id":"","url":"https://api.github.com/users/ldgauthier","html_url":"https://github.com/ldgauthier","followers_url":"https://api.github.com/users/ldgauthier/followers","following_url":"https://api.github.com/users/ldgauthier/following{/other_user}","gists_url":"https://api.github.com/users/ldgauthier/gists{/gist_id}","starred_url":"https://api.github.com/users/ldgauthier/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ldgauthier/subscriptions","organizations_url":"https://api.github.com/users/ldgauthier/orgs","repos_url":"https://api.github.com/users/ldgauthier/repos","events_url":"https://api.github.com/users/ldgauthier/events{/privacy}","received_events_url":"https://api.github.com/users/ldgauthier/received_events","type":"User","site_admin":false}],"milestone":null,"comments":19,"created_at":"2016-09-23T17:21:22Z","updated_at":"2016-10-23T18:20:27Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/broadinstitute/gatk/pulls/2185","html_url":"https://github.com/broadinstitute/gatk/pull/2185","diff_url":"https://github.com/broadinstitute/gatk/pull/2185.diff","patch_url":"https://github.com/broadinstitute/gatk/pull/2185.patch"},"body":"@ldgauthier this cleans up something you have previously grumbled about in the annotation code.  Do you feel like reviewing?"},"comment":{"url":"https://api.github.com/repos/broadinstitute/gatk/issues/comments/255604622","html_url":"https://github.com/broadinstitute/gatk/pull/2185#issuecomment-255604622","issue_url":"https://api.github.com/repos/broadinstitute/gatk/issues/2185","id":255604622,"user":{"login":"davidbenjamin","id":8438890,"avatar_url":"https://avatars.githubusercontent.com/u/8438890?v=3","gravatar_id":"","url":"https://api.github.com/users/davidbenjamin","html_url":"https://github.com/davidbenjamin","followers_url":"https://api.github.com/users/davidbenjamin/followers","following_url":"https://api.github.com/users/davidbenjamin/following{/other_user}","gists_url":"https://api.github.com/users/davidbenjamin/gists{/gist_id}","starred_url":"https://api.github.com/users/davidbenjamin/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/davidbenjamin/subscriptions","organizations_url":"https://api.github.com/users/davidbenjamin/orgs","repos_url":"https://api.github.com/users/davidbenjamin/repos","events_url":"https://api.github.com/users/davidbenjamin/events{/privacy}","received_events_url":"https://api.github.com/users/davidbenjamin/received_events","type":"User","site_admin":false},"created_at":"2016-10-23T18:20:27Z","updated_at":"2016-10-23T18:20:27Z","body":"@magicDGS This PR is necessary for my work on Mutect2, but I'm out on Monday and Tuesday anyway.  If #2154 is merged before Wednesday then all is fine; otherwise I can simply re-instate `PerReadAlleleLikelihoodMap` in this PR and delete it in a later PR."}}
{"actor":{"display_login":"davidbenjamin"}}