{"action":"created","issue":{"url":"https://api.github.com/repos/samtools/htsjdk/issues/552","repository_url":"https://api.github.com/repos/samtools/htsjdk","labels_url":"https://api.github.com/repos/samtools/htsjdk/issues/552/labels{/name}","comments_url":"https://api.github.com/repos/samtools/htsjdk/issues/552/comments","events_url":"https://api.github.com/repos/samtools/htsjdk/issues/552/events","html_url":"https://github.com/samtools/htsjdk/pull/552","id":145701804,"number":552,"title":"Fixes and tests for CRAM index queries.","user":{"login":"cmnbroad","id":10062863,"avatar_url":"https://avatars.githubusercontent.com/u/10062863?v=3","gravatar_id":"","url":"https://api.github.com/users/cmnbroad","html_url":"https://github.com/cmnbroad","followers_url":"https://api.github.com/users/cmnbroad/followers","following_url":"https://api.github.com/users/cmnbroad/following{/other_user}","gists_url":"https://api.github.com/users/cmnbroad/gists{/gist_id}","starred_url":"https://api.github.com/users/cmnbroad/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmnbroad/subscriptions","organizations_url":"https://api.github.com/users/cmnbroad/orgs","repos_url":"https://api.github.com/users/cmnbroad/repos","events_url":"https://api.github.com/users/cmnbroad/events{/privacy}","received_events_url":"https://api.github.com/users/cmnbroad/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/samtools/htsjdk/labels/version","name":"version","color":"d4c5f9"}],"state":"open","locked":false,"assignee":{"login":"droazen","id":798637,"avatar_url":"https://avatars.githubusercontent.com/u/798637?v=3","gravatar_id":"","url":"https://api.github.com/users/droazen","html_url":"https://github.com/droazen","followers_url":"https://api.github.com/users/droazen/followers","following_url":"https://api.github.com/users/droazen/following{/other_user}","gists_url":"https://api.github.com/users/droazen/gists{/gist_id}","starred_url":"https://api.github.com/users/droazen/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/droazen/subscriptions","organizations_url":"https://api.github.com/users/droazen/orgs","repos_url":"https://api.github.com/users/droazen/repos","events_url":"https://api.github.com/users/droazen/events{/privacy}","received_events_url":"https://api.github.com/users/droazen/received_events","type":"User","site_admin":false},"milestone":null,"comments":8,"created_at":"2016-04-04T14:32:42Z","updated_at":"2016-05-27T18:56:43Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/samtools/htsjdk/pulls/552","html_url":"https://github.com/samtools/htsjdk/pull/552","diff_url":"https://github.com/samtools/htsjdk/pull/552.diff","patch_url":"https://github.com/samtools/htsjdk/pull/552.patch"},"body":"Fixes https://github.com/samtools/htsjdk/issues/550 and https://github.com/samtools/htsjdk/issues/481. Does not fix https://github.com/samtools/htsjdk/issues/551, which is going to require a different MultiIntervaliterator implementation and will be in a separate PR.\r\n\r\nThe new tests cases were validated using the corresponding bam/bai; I've left that code commented out in the test file but will remove it once this code has been reviewed."},"comment":{"url":"https://api.github.com/repos/samtools/htsjdk/issues/comments/222226854","html_url":"https://github.com/samtools/htsjdk/pull/552#issuecomment-222226854","issue_url":"https://api.github.com/repos/samtools/htsjdk/issues/552","id":222226854,"user":{"login":"cmnbroad","id":10062863,"avatar_url":"https://avatars.githubusercontent.com/u/10062863?v=3","gravatar_id":"","url":"https://api.github.com/users/cmnbroad","html_url":"https://github.com/cmnbroad","followers_url":"https://api.github.com/users/cmnbroad/followers","following_url":"https://api.github.com/users/cmnbroad/following{/other_user}","gists_url":"https://api.github.com/users/cmnbroad/gists{/gist_id}","starred_url":"https://api.github.com/users/cmnbroad/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/cmnbroad/subscriptions","organizations_url":"https://api.github.com/users/cmnbroad/orgs","repos_url":"https://api.github.com/users/cmnbroad/repos","events_url":"https://api.github.com/users/cmnbroad/events{/privacy}","received_events_url":"https://api.github.com/users/cmnbroad/received_events","type":"User","site_admin":false},"created_at":"2016-05-27T18:56:43Z","updated_at":"2016-05-27T18:56:43Z","body":"Didn't squash or rebase yet but otherwise I think this covers it."}}
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