{"action":"created","issue":{"url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/2","repository_url":"https://api.github.com/repos/jianlianggao/docker-batman","labels_url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/2/labels{/name}","comments_url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/2/comments","events_url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/2/events","html_url":"https://github.com/jianlianggao/docker-batman/pull/2","id":164004055,"number":2,"title":"Update Dockerfile","user":{"login":"korseby","id":15999310,"avatar_url":"https://avatars.githubusercontent.com/u/15999310?v=3","gravatar_id":"","url":"https://api.github.com/users/korseby","html_url":"https://github.com/korseby","followers_url":"https://api.github.com/users/korseby/followers","following_url":"https://api.github.com/users/korseby/following{/other_user}","gists_url":"https://api.github.com/users/korseby/gists{/gist_id}","starred_url":"https://api.github.com/users/korseby/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/korseby/subscriptions","organizations_url":"https://api.github.com/users/korseby/orgs","repos_url":"https://api.github.com/users/korseby/repos","events_url":"https://api.github.com/users/korseby/events{/privacy}","received_events_url":"https://api.github.com/users/korseby/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":6,"created_at":"2016-07-06T06:00:43Z","updated_at":"2016-07-12T11:51:31Z","closed_at":"2016-07-12T11:33:31Z","pull_request":{"url":"https://api.github.com/repos/jianlianggao/docker-batman/pulls/2","html_url":"https://github.com/jianlianggao/docker-batman/pull/2","diff_url":"https://github.com/jianlianggao/docker-batman/pull/2.diff","patch_url":"https://github.com/jianlianggao/docker-batman/pull/2.patch"},"body":"- cleaned apt-get processes up a little\r\n- R packages are now installed via R -e, this is cleaner\r\n- made sure that the added runBATMAN.R file is executable inside the container\r\n- removed typo: .r -> .R makes a huge difference :)\r\n- changed ENTRYPOINT so that the R-script is called from the shell\r\n\r\n- suggestion: du you really need to install the apt-packages from unstable? Consider removing the \"-t unstable\" from the apt-get install."},"comment":{"url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/comments/232023047","html_url":"https://github.com/jianlianggao/docker-batman/pull/2#issuecomment-232023047","issue_url":"https://api.github.com/repos/jianlianggao/docker-batman/issues/2","id":232023047,"user":{"login":"pcm32","id":368478,"avatar_url":"https://avatars.githubusercontent.com/u/368478?v=3","gravatar_id":"","url":"https://api.github.com/users/pcm32","html_url":"https://github.com/pcm32","followers_url":"https://api.github.com/users/pcm32/followers","following_url":"https://api.github.com/users/pcm32/following{/other_user}","gists_url":"https://api.github.com/users/pcm32/gists{/gist_id}","starred_url":"https://api.github.com/users/pcm32/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pcm32/subscriptions","organizations_url":"https://api.github.com/users/pcm32/orgs","repos_url":"https://api.github.com/users/pcm32/repos","events_url":"https://api.github.com/users/pcm32/events{/privacy}","received_events_url":"https://api.github.com/users/pcm32/received_events","type":"User","site_admin":false},"created_at":"2016-07-12T11:51:31Z","updated_at":"2016-07-12T11:51:31Z","body":"@korseby my impression is that if we do apt-get upgrade, we really don't know in which state the image is left, whereas with just depending on r-base, you can always trace back to a version of that image if you need to go back (if something goes wrong, you can switch to the previous to the latest version and see what happened). The apt-get upgrade is an untraceable change, if you get what I mean. I have merged your changes with mine in the development branch of the phnmnl repo. Currently working on some improvements to the R runBatman.R code and the xml wrapper for galaxy."}}
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