{"action":"created","issue":{"url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/85","repository_url":"https://api.github.com/repos/D3DEnergetic/FIDASIM","labels_url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/85/labels{/name}","comments_url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/85/comments","events_url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/85/events","html_url":"https://github.com/D3DEnergetic/FIDASIM/issues/85","id":149266611,"number":85,"title":"Intensity issue","user":{"login":"shaunhaskey","id":3589208,"avatar_url":"https://avatars.githubusercontent.com/u/3589208?v=3","gravatar_id":"","url":"https://api.github.com/users/shaunhaskey","html_url":"https://github.com/shaunhaskey","followers_url":"https://api.github.com/users/shaunhaskey/followers","following_url":"https://api.github.com/users/shaunhaskey/following{/other_user}","gists_url":"https://api.github.com/users/shaunhaskey/gists{/gist_id}","starred_url":"https://api.github.com/users/shaunhaskey/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/shaunhaskey/subscriptions","organizations_url":"https://api.github.com/users/shaunhaskey/orgs","repos_url":"https://api.github.com/users/shaunhaskey/repos","events_url":"https://api.github.com/users/shaunhaskey/events{/privacy}","received_events_url":"https://api.github.com/users/shaunhaskey/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":15,"created_at":"2016-04-18T20:45:38Z","updated_at":"2016-04-20T21:59:48Z","closed_at":null,"body":"@lstagner @bgrierson21 I have been trying to chase down the intensity difference between main ion CER simulations using the old and new FIDASIMs. It seems as though the issue might be related to the beam ion density. I have plotted the n=3 neutrals from old FIDASIM (right plot) and new FIDASIM (left plot). The top row shows the neutrals from fdens, hdens and tdens. The bottom row is DCX+halo, DCX, and Halo only. As far as I can tell the pinj and einj were the same for both simulations. We need to scale the fdens by a factor of about 2.2 to get to the old fdens. The same factor appears to be required for DCX+halo (what gives the main ion CER intensity).\r\n\r\n![screenshot_346](https://cloud.githubusercontent.com/assets/3589208/14619174/074c3b46-056b-11e6-8d13-f68b209e77b0.png)\r\n\r\nI'll keep checking to make sure the inputs are the same, but unless I have made a mistake, it seems that there might be an issue with scaling of the beam deposition..."},"comment":{"url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/comments/212626807","html_url":"https://github.com/D3DEnergetic/FIDASIM/issues/85#issuecomment-212626807","issue_url":"https://api.github.com/repos/D3DEnergetic/FIDASIM/issues/85","id":212626807,"user":{"login":"lstagner","id":4305891,"avatar_url":"https://avatars.githubusercontent.com/u/4305891?v=3","gravatar_id":"","url":"https://api.github.com/users/lstagner","html_url":"https://github.com/lstagner","followers_url":"https://api.github.com/users/lstagner/followers","following_url":"https://api.github.com/users/lstagner/following{/other_user}","gists_url":"https://api.github.com/users/lstagner/gists{/gist_id}","starred_url":"https://api.github.com/users/lstagner/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/lstagner/subscriptions","organizations_url":"https://api.github.com/users/lstagner/orgs","repos_url":"https://api.github.com/users/lstagner/repos","events_url":"https://api.github.com/users/lstagner/events{/privacy}","received_events_url":"https://api.github.com/users/lstagner/received_events","type":"User","site_admin":false},"created_at":"2016-04-20T21:59:48Z","updated_at":"2016-04-20T21:59:48Z","body":"```\r\n/venus-scratch/haskeysr/OMFIT/runs/projectID__ab42d7ab84__2016-04-13_19_12_29/FIDASIM/p0\r\n```"}}