{"action":"created","issue":{"url":"https://api.github.com/repos/LLNL/spack/issues/1000","repository_url":"https://api.github.com/repos/LLNL/spack","labels_url":"https://api.github.com/repos/LLNL/spack/issues/1000/labels{/name}","comments_url":"https://api.github.com/repos/LLNL/spack/issues/1000/comments","events_url":"https://api.github.com/repos/LLNL/spack/issues/1000/events","html_url":"https://github.com/LLNL/spack/pull/1000","id":157409401,"number":1000,"title":"Add version 3.3.0 of R and extensions","user":{"login":"glennpj","id":16138574,"avatar_url":"https://avatars.githubusercontent.com/u/16138574?v=3","gravatar_id":"","url":"https://api.github.com/users/glennpj","html_url":"https://github.com/glennpj","followers_url":"https://api.github.com/users/glennpj/followers","following_url":"https://api.github.com/users/glennpj/following{/other_user}","gists_url":"https://api.github.com/users/glennpj/gists{/gist_id}","starred_url":"https://api.github.com/users/glennpj/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/glennpj/subscriptions","organizations_url":"https://api.github.com/users/glennpj/orgs","repos_url":"https://api.github.com/users/glennpj/repos","events_url":"https://api.github.com/users/glennpj/events{/privacy}","received_events_url":"https://api.github.com/users/glennpj/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":2,"created_at":"2016-05-29T22:23:23Z","updated_at":"2016-06-06T22:26:43Z","closed_at":null,"pull_request":{"url":"https://api.github.com/repos/LLNL/spack/pulls/1000","html_url":"https://github.com/LLNL/spack/pull/1000","diff_url":"https://github.com/LLNL/spack/pull/1000.diff","patch_url":"https://github.com/LLNL/spack/pull/1000.patch"},"body":"This PR updates the version of R to 3.3.0. It also runs it and the existing R extensions through autopep8. This PR also adds curl and pcre dependencies. In the case of pcre, this PR adds a 'utf' variant to the pcre package, set to True by default.\r\n\r\nThe BiocGenerics package was updated. This is a BioConductor package and the issue is that the bioconductor repositories only maintain the latest versions. I am not sure what the best way is to handle that in spack. There could potentially be plenty of bioconductor packages so it may be best to treat them in a different way from other R packages. There is a bioconductor installer that will manage the packages but it does not really fit the \"spack way\"."},"comment":{"url":"https://api.github.com/repos/LLNL/spack/issues/comments/224107969","html_url":"https://github.com/LLNL/spack/pull/1000#issuecomment-224107969","issue_url":"https://api.github.com/repos/LLNL/spack/issues/1000","id":224107969,"user":{"login":"glennpj","id":16138574,"avatar_url":"https://avatars.githubusercontent.com/u/16138574?v=3","gravatar_id":"","url":"https://api.github.com/users/glennpj","html_url":"https://github.com/glennpj","followers_url":"https://api.github.com/users/glennpj/followers","following_url":"https://api.github.com/users/glennpj/following{/other_user}","gists_url":"https://api.github.com/users/glennpj/gists{/gist_id}","starred_url":"https://api.github.com/users/glennpj/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/glennpj/subscriptions","organizations_url":"https://api.github.com/users/glennpj/orgs","repos_url":"https://api.github.com/users/glennpj/repos","events_url":"https://api.github.com/users/glennpj/events{/privacy}","received_events_url":"https://api.github.com/users/glennpj/received_events","type":"User","site_admin":false},"created_at":"2016-06-06T22:26:43Z","updated_at":"2016-06-06T22:26:43Z","body":"@tgamblin I am reasonably pleased with the solution for future bioconductor packages so I think this is ready to merge now."}}
{"actor":{"display_login":"glennpj"}}