{"action":"closed","issue":{"url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/2113","repository_url":"https://api.github.com/repos/CellProfiler/CellProfiler","labels_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/2113/labels{/name}","comments_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/2113/comments","events_url":"https://api.github.com/repos/CellProfiler/CellProfiler/issues/2113/events","html_url":"https://github.com/CellProfiler/CellProfiler/issues/2113","id":161995570,"number":2113,"title":"Error compiling CellProfiler 2.2.0 on Ubuntu 16.04","user":{"login":"emmenlau","id":1098087,"avatar_url":"https://avatars.githubusercontent.com/u/1098087?v=3","gravatar_id":"","url":"https://api.github.com/users/emmenlau","html_url":"https://github.com/emmenlau","followers_url":"https://api.github.com/users/emmenlau/followers","following_url":"https://api.github.com/users/emmenlau/following{/other_user}","gists_url":"https://api.github.com/users/emmenlau/gists{/gist_id}","starred_url":"https://api.github.com/users/emmenlau/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/emmenlau/subscriptions","organizations_url":"https://api.github.com/users/emmenlau/orgs","repos_url":"https://api.github.com/users/emmenlau/repos","events_url":"https://api.github.com/users/emmenlau/events{/privacy}","received_events_url":"https://api.github.com/users/emmenlau/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":2,"created_at":"2016-06-23T18:48:18Z","updated_at":"2016-07-11T06:08:23Z","closed_at":"2016-07-11T06:08:23Z","body":"This is a report only to track a problem compiling CellProfiler 2.2.0 on Ubuntu 16.04. Its not meant necessarily to be fixed by CellProfiler developers, but rather to keep track of the problem.\r\n```\r\n#> python setup.py install\r\n```\r\nwill run for a while and then exit with\r\n```\r\nsetuptools.sandbox.UnpickleableException: CompilerCrash((<FileSourceDescriptor:/tmp/easy_install-3_Byeq/pandas-0.18.1/pandas/algos.pyx>, 1, 0), 'RemoveUnreachableCode', u'Compiler crash in RemoveUnreachableCode\\n\\nModuleNode.body = StatListNode(algos.pyx:1:0)\\n\\nCompiler crash traceback from this point on:\\n  File \"Cython/Compiler/Visitor.py\", line 183, in Cython.Compiler.Visitor.TreeVisitor._visit (/build/cython-qP7c_y/cython-0.23.4/Cython/Compiler/Visitor.c:4646)\\n    return handler_method(obj)\\n  File \"/usr/lib/python2.7/dist-packages/Cython/Compiler/ParseTreeTransforms.py\", line 2158, in visit_StatListNode\\n    if not self.current_directives[\\'remove_unreachable\\']:\\nTypeError: \\'NoneType\\' object has no attribute \\'__getitem__\\'', TypeError(\"'NoneType' object has no attribute '__getitem__'\",), <traceback object at 0x7f5f8d2fb560>)\r\nError in atexit._run_exitfuncs:\r\nTraceback (most recent call last):\r\n  File \"/usr/lib/python2.7/atexit.py\", line 24, in _run_exitfuncs\r\n    func(*targs, **kargs)\r\n  File \"/usr/lib/python2.7/dist-packages/numpy/distutils/misc_util.py\", line 27, in clean_up_temporary_directory\r\n    for d in _tmpdirs:\r\nTypeError: 'NoneType' object is not iterable\r\nError in atexit._run_exitfuncs:\r\nTraceback (most recent call last):\r\n  File \"/usr/lib/python2.7/atexit.py\", line 24, in _run_exitfuncs\r\n    func(*targs, **kargs)\r\n  File \"/usr/lib/python2.7/dist-packages/numpy/distutils/misc_util.py\", line 27, in clean_up_temporary_directory\r\n    for d in _tmpdirs:\r\nTypeError: 'NoneType' object is not iterable\r\nError in sys.exitfunc:\r\nTraceback (most recent call last):\r\n  File \"/usr/lib/python2.7/atexit.py\", line 24, in _run_exitfuncs\r\n    func(*targs, **kargs)\r\n  File \"/usr/lib/python2.7/dist-packages/numpy/distutils/misc_util.py\", line 27, in clean_up_temporary_directory\r\n    for d in _tmpdirs:\r\nTypeError: 'NoneType' object is not iterable\r\n```\r\n"}}
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