{"action":"created","issue":{"url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/22","repository_url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api","labels_url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/22/labels{/name}","comments_url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/22/comments","events_url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/22/events","html_url":"https://github.com/PRIDE-Utilities/ms-data-core-api/issues/22","id":169122571,"number":22,"title":"Issue with Spectrum Reader","user":{"login":"ypriverol","id":52113,"avatar_url":"https://avatars.githubusercontent.com/u/52113?v=3","gravatar_id":"","url":"https://api.github.com/users/ypriverol","html_url":"https://github.com/ypriverol","followers_url":"https://api.github.com/users/ypriverol/followers","following_url":"https://api.github.com/users/ypriverol/following{/other_user}","gists_url":"https://api.github.com/users/ypriverol/gists{/gist_id}","starred_url":"https://api.github.com/users/ypriverol/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/ypriverol/subscriptions","organizations_url":"https://api.github.com/users/ypriverol/orgs","repos_url":"https://api.github.com/users/ypriverol/repos","events_url":"https://api.github.com/users/ypriverol/events{/privacy}","received_events_url":"https://api.github.com/users/ypriverol/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/labels/bug","name":"bug","color":"fc2929"}],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":8,"created_at":"2016-08-03T12:45:12Z","updated_at":"2016-10-19T22:35:50Z","closed_at":null,"body":"Good morning,\r\n\r\nI’ve made a few modifications to the ms-data-core-api (2.0.8-SNAPSHOT version). I, then, ran \"mvn install\"  to get it on my local machine and added this version to my pom file, which is working with the 2.0.8-SNAPSHOT version.\r\n\r\nI do, however, get some weird behavior when using 2.0.8-SNAPSHOT instead of the 2.0.5 fat jar from github’s release. Weird behavior include:\r\n\r\nWhen debugging my application, I get the following errors during initial setup:\r\njava.io.FileNotFoundException: /home/.m2/repository/edu/ucar/netcdf4/4.5.5/jcl-over-slf4j-1.7.7.jar\r\njava.io.FileNotFoundException: /home/.m2/repository/edu/ucar/netcdf4/4.5.5/ehcache-core-2.6.2.jar\r\nWhenever I use uk.ac.ebi.pride.utilities.data.controller.impl.ControllerImpl.MzXmlControllerImpl.getSpectrumById(Comparable id), the id value gets outputted to stdout, which doesn’t occur on 2.0.5. This can’t be ignored because it slows down considerably the program. I traced this to here.\r\nI do get a lot of logback warnings that I don’t get using 2.0.5\r\n\r\nIs there something that I’m missing here, regarding the warnings and the file not found exception? Should I be making a fat jar to use locally as well? I didn’t think that’d be necessary. Maybe I’m not building the lib correctly? \r\n\r\nThank you very much for your assistance "},"comment":{"url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/comments/254960987","html_url":"https://github.com/PRIDE-Utilities/ms-data-core-api/issues/22#issuecomment-254960987","issue_url":"https://api.github.com/repos/PRIDE-Utilities/ms-data-core-api/issues/22","id":254960987,"user":{"login":"Streppel","id":2300328,"avatar_url":"https://avatars.githubusercontent.com/u/2300328?v=3","gravatar_id":"","url":"https://api.github.com/users/Streppel","html_url":"https://github.com/Streppel","followers_url":"https://api.github.com/users/Streppel/followers","following_url":"https://api.github.com/users/Streppel/following{/other_user}","gists_url":"https://api.github.com/users/Streppel/gists{/gist_id}","starred_url":"https://api.github.com/users/Streppel/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Streppel/subscriptions","organizations_url":"https://api.github.com/users/Streppel/orgs","repos_url":"https://api.github.com/users/Streppel/repos","events_url":"https://api.github.com/users/Streppel/events{/privacy}","received_events_url":"https://api.github.com/users/Streppel/received_events","type":"User","site_admin":false},"created_at":"2016-10-19T22:35:50Z","updated_at":"2016-10-19T22:35:50Z","body":"Yasset,\n\nI was using it in a project used by the University of California, San\nDiego. However I had to leave the project and I don't know if it's still\ngoing to be maintained as it wasn't completely finished by the time I left.\n\n2016-10-19 19:38 GMT-02:00 Yasset Perez-Riverol <notifications@github.com>:\n\n> Are you using the library? We would like to have a list of software that\n> is using the library.\n>\n> —\n> You are receiving this because you commented.\n> Reply to this email directly, view it on GitHub\n> <https://github.com/PRIDE-Utilities/ms-data-core-api/issues/22#issuecomment-254948762>,\n> or mute the thread\n> <https://github.com/notifications/unsubscribe-auth/ACMZqJRmHvtPfyEYTwOxSWkVhsNafa2vks5q1o3wgaJpZM4Jbnx8>\n> .\n>\n\n\n\n-- \n*Natan Streppel*\n"}}
{"actor":{"display_login":"Streppel"}}