{"action":"created","issue":{"url":"https://api.github.com/repos/biopython/biopython/issues/978","repository_url":"https://api.github.com/repos/biopython/biopython","labels_url":"https://api.github.com/repos/biopython/biopython/issues/978/labels{/name}","comments_url":"https://api.github.com/repos/biopython/biopython/issues/978/comments","events_url":"https://api.github.com/repos/biopython/biopython/issues/978/events","html_url":"https://github.com/biopython/biopython/issues/978","id":186004843,"number":978,"title":"Pip throws error when installing.","user":{"login":"Cediddi","id":2720608,"avatar_url":"https://avatars.githubusercontent.com/u/2720608?v=3","gravatar_id":"","url":"https://api.github.com/users/Cediddi","html_url":"https://github.com/Cediddi","followers_url":"https://api.github.com/users/Cediddi/followers","following_url":"https://api.github.com/users/Cediddi/following{/other_user}","gists_url":"https://api.github.com/users/Cediddi/gists{/gist_id}","starred_url":"https://api.github.com/users/Cediddi/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/Cediddi/subscriptions","organizations_url":"https://api.github.com/users/Cediddi/orgs","repos_url":"https://api.github.com/users/Cediddi/repos","events_url":"https://api.github.com/users/Cediddi/events{/privacy}","received_events_url":"https://api.github.com/users/Cediddi/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":3,"created_at":"2016-10-28T19:40:45Z","updated_at":"2016-11-04T14:14:17Z","closed_at":null,"body":"I'm a simple man with simple needs. I need to install my requirements with pip. \n\nBut whenever I try to do that I get an error that says I haven't installed numpy. I don't need numpy but biopython does and In python wonderland ,unless it's a system level dependency, packages should not throw errors about dependencies, instead they should define them inside \"install_requires\" option of setup.py.\n\nWhy do I have to do pip install numpy before do pip install -r requirements.txt ? Yes that's a first world problem but It's irritating to explicitly install numpy before installing biopython in my requirements.txt... Just, why... 😞 I install 70+ dependencies without problem, except biopython's \"unusual desire\" for numpy being preinstalled.\n\nI might look like a jerk to you but this is very irritating and I believe you had serious discussions before coding this out-of-standard behavior. Just please try to fix this. Packages should not depend on user behavior, but should depend on setup.py's defined behavior... 😞 \n"},"comment":{"url":"https://api.github.com/repos/biopython/biopython/issues/comments/258442165","html_url":"https://github.com/biopython/biopython/issues/978#issuecomment-258442165","issue_url":"https://api.github.com/repos/biopython/biopython/issues/978","id":258442165,"user":{"login":"abdounasser202","id":11424142,"avatar_url":"https://avatars.githubusercontent.com/u/11424142?v=3","gravatar_id":"","url":"https://api.github.com/users/abdounasser202","html_url":"https://github.com/abdounasser202","followers_url":"https://api.github.com/users/abdounasser202/followers","following_url":"https://api.github.com/users/abdounasser202/following{/other_user}","gists_url":"https://api.github.com/users/abdounasser202/gists{/gist_id}","starred_url":"https://api.github.com/users/abdounasser202/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/abdounasser202/subscriptions","organizations_url":"https://api.github.com/users/abdounasser202/orgs","repos_url":"https://api.github.com/users/abdounasser202/repos","events_url":"https://api.github.com/users/abdounasser202/events{/privacy}","received_events_url":"https://api.github.com/users/abdounasser202/received_events","type":"User","site_admin":false},"created_at":"2016-11-04T14:14:17Z","updated_at":"2016-11-04T14:14:17Z","body":"I think it would be better to put all the dependencies in a file `requirements.txt` so we can install them by making a `pip install -r requiremens.txt`"}}
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