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users to supply a constraint tree topology (`-g` option) to guide tree search, such that the resulting tree obeys the constraint. A naive implementation will be released with version 1.5.0. \r\n\r\n    iqtree -s alignment -g constraint_tree ...\r\n\r\nTODOs (as of Sept 8, 2016):\r\n\r\n* Speed up the naive version, as it right now can be slow for large trees. This involves mainly two steps: the initial tree construction and the NNI moves.\r\n"}}
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