{"action":"created","issue":{"url":"https://api.github.com/repos/GMOD/Apollo/issues/1156","repository_url":"https://api.github.com/repos/GMOD/Apollo","labels_url":"https://api.github.com/repos/GMOD/Apollo/issues/1156/labels{/name}","comments_url":"https://api.github.com/repos/GMOD/Apollo/issues/1156/comments","events_url":"https://api.github.com/repos/GMOD/Apollo/issues/1156/events","html_url":"https://github.com/GMOD/Apollo/issues/1156","id":163408147,"number":1156,"title":"Current organism, addStores and addTracks information lost when clicking \"Show Annotator 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ues":4,"state":"open","created_at":"2016-03-21T17:36:39Z","updated_at":"2016-08-31T21:17:33Z","due_on":null,"closed_at":null},"comments":20,"created_at":"2016-07-01T14:32:29Z","updated_at":"2016-09-01T16:40:16Z","closed_at":null,"body":"This might be similar or related to issue #1140,  #1141;  loadLink not passing all parameters through, but when I try to pass addStores and addTracks information through to the new Apollo2 view (via the Show Annotator Panel) the information from my current view is completely lost.  I lose the organism I was working on, and the track and datastore are also lost once I load the organism.  \r\n\r\n/apollo-2.0.3/Tigriopus californicus/jbrowse/?loc=scaffold_222%3A147374..147857&addStores={\"url\"%3A{\"type\"%3A\"JBrowse%2FStore%2FSeqFeature%2FGFF3\"%2C\"urlTemplate\"%3A\"https%3A%2F%2Fgmod-dev.server%2Fwebapp%2Fmedia%2Fblast%2Ftask%2F8796ff4bad7b4dd6b15237abc9bd0cc3%2FTCALIF_genome_v1.0_new_ids.fasta.gff\"}}&addTracks=[{\"label\"%3A\"BLAST%2B Results\"%2C\"category\"%3A\"0. Reference Assembly\"%2C\"type\"%3A\"WebApollo%2FView%2FTrack%2FDraggableBLASTFeatures\"%2C\"store\"%3A\"url\"%2C\"style\"%3A{\"renderClassName\"%3A\"gray-center-10pct\"%2C\"subfeatureClasses\"%3A{\"match_part\"%3A\"blast-match_part\"}}}]&tracks=DNA%2CAnnotations%2CBLAST%2B Results&highlight="},"comment":{"url":"https://api.github.com/repos/GMOD/Apollo/issues/comments/244138102","html_url":"https://github.com/GMOD/Apollo/issues/1156#issuecomment-244138102","issue_url":"https://api.github.com/repos/GMOD/Apollo/issues/1156","id":244138102,"user":{"login":"nathandunn","id":751274,"avatar_url":"https://avatars.githubusercontent.com/u/751274?v=3","gravatar_id":"","url":"https://api.github.com/users/nathandunn","html_url":"https://github.com/nathandunn","followers_url":"https://api.github.com/users/nathandunn/followers","following_url":"https://api.github.com/users/nathandunn/following{/other_user}","gists_url":"https://api.github.com/users/nathandunn/gists{/gist_id}","starred_url":"https://api.github.com/users/nathandunn/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/nathandunn/subscriptions","organizations_url":"https://api.github.com/users/nathandunn/orgs","repos_url":"https://api.github.com/users/nathandunn/repos","events_url":"https://api.github.com/users/nathandunn/events{/privacy}","received_events_url":"https://api.github.com/users/nathandunn/received_events","type":"User","site_admin":false},"created_at":"2016-09-01T16:40:16Z","updated_at":"2016-09-01T16:40:16Z","body":"The issue is that when you go to the organism in JBrowse view you can a URL like this when logged in where the client_token is \"Honey2\", which is not good:\r\n\r\n| 195 |       0 | Honey2                        | 2016-09-01 09:37:45 | NULL   | 2016-09-01 09:37:45 | NULL | NULL               | org.bbop.apollo.UserOrganismPreference |       1 |                1 |    NULL |              NULL |           3 |        5647 |    NULL |\r\n\r\nWhat should happen is that if you are logged in, it should always have a client_token that is not an organism and redirect. \r\n"}}
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