{"action":"opened","issue":{"url":"https://api.github.com/repos/WormBase/website/issues/4597","repository_url":"https://api.github.com/repos/WormBase/website","labels_url":"https://api.github.com/repos/WormBase/website/issues/4597/labels{/name}","comments_url":"https://api.github.com/repos/WormBase/website/issues/4597/comments","events_url":"https://api.github.com/repos/WormBase/website/issues/4597/events","html_url":"https://github.com/WormBase/website/issues/4597","id":135006803,"number":4597,"title":"  Hello,  I have RNA-seq datasets from ...","user":{"login":"wormbasehelp","id":3810208,"avatar_url":"https://avatars.githubusercontent.com/u/3810208?v=3","gravatar_id":"","url":"https://api.github.com/users/wormbasehelp","html_url":"https://github.com/wormbasehelp","followers_url":"https://api.github.com/users/wormbasehelp/followers","following_url":"https://api.github.com/users/wormbasehelp/following{/other_user}","gists_url":"https://api.github.com/users/wormbasehelp/gists{/gist_id}","starred_url":"https://api.github.com/users/wormbasehelp/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/wormbasehelp/subscriptions","organizations_url":"https://api.github.com/users/wormbasehelp/orgs","repos_url":"https://api.github.com/users/wormbasehelp/repos","events_url":"https://api.github.com/users/wormbasehelp/events{/privacy}","received_events_url":"https://api.github.com/users/wormbasehelp/received_events","type":"User","site_admin":false},"labels":[{"url":"https://api.github.com/repos/WormBase/website/labels/HelpDesk","name":"HelpDesk","color":"DF7401"}],"state":"open","locked":false,"assignee":null,"milestone":null,"comments":0,"created_at":"2016-02-20T00:03:54Z","updated_at":"2016-02-20T00:03:54Z","closed_at":null,"body":"\n*Submitted from the feedback form on the WormBase website.*\n\n<p>&nbsp;&nbsp;Hello, <br/>I have RNA-seq datasets from C. elegans and I would like to align them to the WS245 version of the reference genome using STAR. STAR requires as input the genomic fasta sequence, which I have successfully downloaded from the ftp site.  STAR also requires an annotation file, preferably in GTF format.  However, I have only been able to locate annotations on the ftp site in the GFF2 and GFF3 file format. Is the GTF file format available, and if so, where can I download it? Thank you so much for your help! <br/>Sincerely,<br/>Stephanie</p>\n\n**Reported by:** Step************** (smpy****************)\n**Submitted from:** <a target=\"_blank\" href=\"http://www.wormbase.org//tools/support\">/tools/support</a>\n**Browser:** Mozilla/5.0 (Macintosh; Intel Mac OS X 10_9_5) AppleWebKit/537.36 (KHTML, like Gecko) Chrome/48.0.2564.109 Safari/537.36\n\n"}}