{"action":"created","issue":{"url":"https://api.github.com/repos/TIGRLab/admin/issues/581","repository_url":"https://api.github.com/repos/TIGRLab/admin","labels_url":"https://api.github.com/repos/TIGRLab/admin/issues/581/labels{/name}","comments_url":"https://api.github.com/repos/TIGRLab/admin/issues/581/comments","events_url":"https://api.github.com/repos/TIGRLab/admin/issues/581/events","html_url":"https://github.com/TIGRLab/admin/issues/581","id":159977792,"number":581,"title":"DTIprep","user":{"login":"arash-n","id":11356980,"avatar_url":"https://avatars.githubusercontent.com/u/11356980?v=3","gravatar_id":"","url":"https://api.github.com/users/arash-n","html_url":"https://github.com/arash-n","followers_url":"https://api.github.com/users/arash-n/followers","following_url":"https://api.github.com/users/arash-n/following{/other_user}","gists_url":"https://api.github.com/users/arash-n/gists{/gist_id}","starred_url":"https://api.github.com/users/arash-n/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/arash-n/subscriptions","organizations_url":"https://api.github.com/users/arash-n/orgs","repos_url":"https://api.github.com/users/arash-n/repos","events_url":"https://api.github.com/users/arash-n/events{/privacy}","received_events_url":"https://api.github.com/users/arash-n/received_events","type":"User","site_admin":false},"labels":[],"state":"closed","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":6,"created_at":"2016-06-13T15:26:44Z","updated_at":"2016-06-25T19:21:32Z","closed_at":"2016-06-13T15:51:31Z","body":"Hey guys,\r\n\r\nI will be using DTIprep to preprocess PACTMD which requires nrrd files. I was wondering if you can convert the DICOMs for multi-shell data to nrrd. In addition, please let me know how we generally use DTIprep (e.g. a protocol, GUI vs. command line, etc.). \r\n\r\nCheers,\r\nArash "},"comment":{"url":"https://api.github.com/repos/TIGRLab/admin/issues/comments/228566097","html_url":"https://github.com/TIGRLab/admin/issues/581#issuecomment-228566097","issue_url":"https://api.github.com/repos/TIGRLab/admin/issues/581","id":228566097,"user":{"login":"pipitone","id":509382,"avatar_url":"https://avatars.githubusercontent.com/u/509382?v=3","gravatar_id":"","url":"https://api.github.com/users/pipitone","html_url":"https://github.com/pipitone","followers_url":"https://api.github.com/users/pipitone/followers","following_url":"https://api.github.com/users/pipitone/following{/other_user}","gists_url":"https://api.github.com/users/pipitone/gists{/gist_id}","starred_url":"https://api.github.com/users/pipitone/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/pipitone/subscriptions","organizations_url":"https://api.github.com/users/pipitone/orgs","repos_url":"https://api.github.com/users/pipitone/repos","events_url":"https://api.github.com/users/pipitone/events{/privacy}","received_events_url":"https://api.github.com/users/pipitone/received_events","type":"User","site_admin":false},"created_at":"2016-06-25T19:21:32Z","updated_at":"2016-06-25T19:21:32Z","body":"Check the README in the project folder and try searching the closed issues if nothing is mentioned there. Some subjects don't have DTI acquisitions. \n\n> On Jun 25, 2016, at 2:40 PM, Arash Nazeri <notifications@github.com> wrote:\n> \n> I am running DTIPrep now and it looks fine now. However, the nrrd files for the following DTI subjects is non-existent:\n> H001\n> \n> H003\n> \n> H004\n> \n> H008\n> \n> H010\n> \n> H012\n> \n> H013\n> \n> H016\n> \n> H034\n> \n> H082\n> \n> H146\n> \n> H147\n> \n> H148\n> \n> H149\n> \n> H150\n> \n> H151\n> \n> H152\n> \n> H153\n> \n> H155\n> \n> H156\n> \n> H157\n> \n> H158\n> \n> —\n> You are receiving this because you modified the open/close state.\n> Reply to this email directly, view it on GitHub, or mute the thread.\n> \n"}}
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