{"action":"created","comment":{"url":"https://api.github.com/repos/rstats-db/RSQLite/pulls/comments/56410181","id":56410181,"diff_hunk":"@@ -0,0 +1,1216 @@\n+# Setup\n+\n+## Platform\n+\n+|setting  |value                        |\n+|:--------|:----------------------------|\n+|version  |R version 3.2.3 (2015-12-10) |\n+|system   |x86_64, linux-gnu            |\n+|ui       |X11                          |\n+|language |(EN)                         |\n+|collate  |en_US.UTF-8                  |\n+|tz       |Europe/Zurich                |\n+|date     |2016-03-16                   |\n+\n+## Packages\n+\n+|package   |*  |version     |date       |source                           |\n+|:---------|:--|:-----------|:----------|:--------------------------------|\n+|BH        |   |1.60.0-1    |2015-12-28 |CRAN (R 3.2.3)                   |\n+|DBI       |   |0.3.1       |2014-09-24 |CRAN (R 3.2.3)                   |\n+|knitr     |   |1.12.3      |2016-01-22 |CRAN (R 3.2.3)                   |\n+|Rcpp      |   |0.12.3      |2016-01-10 |CRAN (R 3.2.3)                   |\n+|rmarkdown |   |0.9.5       |2016-02-22 |CRAN (R 3.2.3)                   |\n+|RSQLite   |   |1.0.9002    |2016-03-16 |local (rstats-db/RSQLite)        |\n+|testthat  |   |0.11.0.9000 |2016-03-16 |Github (hadley/testthat@a102b89) |\n+\n+# Check results\n+55 checked out of 0 dependencies \n+\n+## archivist (2.0.3)\n+Maintainer: Przemyslaw Biecek <przemyslaw.biecek@gmail.com>  \n+Bug reports: https://github.com/pbiecek/archivist/issues\n+\n+1 error  | 0 warnings | 0 notes\n+\n+```\n+checking whether package ‘archivist’ can be installed ... ERROR\n+Installation failed.\n+See ‘/nas/muelleki/git/RSQLite/revdep/checks/archivist.Rcheck/00install.out’ for details.\n+```\n+\n+## BatchExperiments (1.4.1)\n+Maintainer: Michel Lang <michellang@gmail.com>  \n+Bug reports: https://github.com/tudo-r/BatchExperiments/issues\n+\n+1 error  | 0 warnings | 0 notes\n+\n+```\n+checking whether package ‘BatchExperiments’ can be installed ... ERROR\n+Installation failed.\n+See ‘/nas/muelleki/git/RSQLite/revdep/checks/BatchExperiments.Rcheck/00install.out’ for details.\n+```\n+\n+## BatchJobs (1.6)\n+Maintainer: Bernd Bischl <bernd_bischl@gmx.net>  \n+Bug reports: https://github.com/tudo-r/BatchJobs/issues\n+\n+1 error  | 0 warnings | 0 notes\n+\n+```\n+checking whether package ‘BatchJobs’ can be installed ... ERROR\n+Installation failed.\n+See ‘/nas/muelleki/git/RSQLite/revdep/checks/BatchJobs.Rcheck/00install.out’ for details.\n+```\n+\n+## biglm (0.9-1)\n+Maintainer: Thomas Lumley <tlumley@u.washington.edu>\n+\n+0 errors | 0 warnings | 5 notes\n+\n+```\n+checking DESCRIPTION meta-information ... NOTE\n+Malformed Description field: should contain one or more complete sentences.\n+\n+checking top-level files ... NOTE\n+Non-standard file/directory found at top level:\n+  ‘test’\n+\n+checking dependencies in R code ... NOTE\n+Packages in Depends field not imported from:\n+  ‘DBI’ ‘methods’\n+  These packages need to be imported from (in the NAMESPACE file)\n+  for when this namespace is loaded but not attached.\n+\n+checking foreign function calls ... NOTE\n+Call with DUP:\n+   .Fortran(\"regcf\", as.integer(p), as.integer(p * p/2), bigQR$D, \n+       bigQR$rbar, bigQR$thetab, bigQR$tol, beta = numeric(p), nreq = as.integer(nvar), \n+       ier = integer(1), DUP = FALSE)\n+DUP is no longer supported and will be ignored.\n+\n+checking R code for possible problems ... NOTE\n+bigglm.RODBC: no visible global function definition for ‘odbcQuery’\n+bigglm.RODBC : chunk: no visible global function definition for\n+  ‘odbcQuery’\n+bigglm.RODBC : chunk: no visible global function definition for\n+  ‘sqlGetResults’\n+bigglm,ANY-DBIConnection : .local: no visible global function\n+  definition for ‘dbSendQuery’\n+bigglm,ANY-DBIConnection : .local: no visible global function\n+  definition for ‘dbClearResult’\n+bigglm,ANY-DBIConnection : .local : chunk: no visible global function\n+  definition for ‘dbClearResult’\n+bigglm,ANY-DBIConnection : .local : chunk: no visible global function\n+  definition for ‘dbSendQuery’\n+bigglm,ANY-DBIConnection : .local : chunk: no visible global function\n+  definition for ‘fetch’\n+\n+Found the following calls to data() loading into the global environment:\n+File ‘biglm/R/bigglm.R’:\n+  data(reset = TRUE)\n+  data(reset = FALSE)\n+See section ‘Good practice’ in ‘?data’.\n+```\n+\n+## caroline (0.7.6)\n+Maintainer: David Schruth <caroline@hominine.net>\n+\n+1 error  | 0 warnings | 2 notes\n+\n+```\n+checking examples ... ERROR\n+Running examples in ‘caroline-Ex.R’ failed\n+The error most likely occurred in:\n+\n+> base::assign(\".ptime\", proc.time(), pos = \"CheckExEnv\")\n+> ### Name: bestBy\n+> ### Title: Find the \"best\" record within subgroups of a dataframe.\n+> ### Aliases: bestBy\n+> \n+> ### ** Examples\n+... 10 lines ...\n+y    34     y      c\n+z    23     z      g\n+x     5     x      e\n+> ## or using SQLite\n+> best.hits.sql <- bestBy(blast.results, by='query', best='score', inverse=TRUE, sql=TRUE)\n+Loading required package: RSQLite\n+Error in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) : \n+  namespace ‘DBI’ 0.3.1 is being loaded, but >= 0.3.1.9006 is required\n+Error in bestBy(blast.results, by = \"query\", best = \"score\", inverse = TRUE,  : \n+  could not find function \"dbConnect\"\n+Execution halted\n+\n+checking dependencies in R code ... NOTE\n+'library' or 'require' calls in package code:\n+  ‘MASS’ ‘RSQLite’ ‘grid’ ‘sm’\n+  Please use :: or requireNamespace() instead.\n+  See section 'Suggested packages' in the 'Writing R Extensions' manual.\n+\n+checking R code for possible problems ... NOTE\n+bestBy: no visible global function definition for ‘dbConnect’\n+bestBy: no visible global function definition for ‘dbDriver’\n+bestBy: no visible global function definition for ‘dbWriteTable’\n+bestBy: no visible global function definition for ‘dbGetQuery’\n+dbWriteTable2: no visible global function definition for ‘dbListFields’\n+dbWriteTable2: no visible global function definition for ‘dbGetQuery’\n+dbWriteTable2: no visible global function definition for ‘dbSendQuery’\n+dbWriteTable2: no visible global function definition for ‘dbColumnInfo’\n+dbWriteTable2: no visible global function definition for\n+... 11 lines ...\n+spie: no visible global function definition for ‘dataViewport’\n+spie: no visible global function definition for ‘grid.circle’\n+spie: no visible global function definition for ‘gpar’\n+spie: no visible global function definition for ‘grid.polygon’\n+spie: no visible global function definition for ‘grid.rect’\n+spie: no visible global function definition for ‘stringWidth’\n+spie: no visible global function definition for ‘stringHeight’\n+spie: no visible global function definition for ‘grid.text’\n+spie: no visible global function definition for ‘grid.lines’\n+spie: no visible global function definition for ‘unit’\n+spie: no visible global function definition for ‘upViewport’\n+```\n+\n+## chunked (0.1.1)\n+Maintainer: Edwin de Jonge <edwindjonge@gmail.com>\n+\n+1 error  | 0 warnings | 0 notes\n+\n+```\n+checking tests ... ERROR\n+Running the tests in ‘tests/testthat.R’ failed.\n+Last 13 lines of output:\n+  \n+      filter, lag\n+  \n+  The following objects are masked from 'package:base':\n+  \n+      intersect, setdiff, setequal, union\n+  \n+  > \n+  > test_check(\"chunked\")\n+  Error: RSQLite package required to connect to sqlite db\n+  testthat results ================================================================\n+  OK: 1 SKIPPED: 0 FAILED: 0\n+  Execution halted\n+```\n+\n+## CITAN (2015.12-2)\n+Maintainer: Marek Gagolewski <gagolews@ibspan.waw.pl>  \n+Bug reports: https://github.com/Rexamine/CITAN/issues\n+\n+1 error  | 0 warnings | 0 notes\n+\n+```\n+checking whether package ‘CITAN’ can be installed ... ERROR\n+Installation failed.\n+See ‘/nas/muelleki/git/RSQLite/revdep/checks/CITAN.Rcheck/00install.out’ for details.\n+```\n+\n+## DBI 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