{"action":"created","issue":{"url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1527","repository_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen","labels_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1527/labels{/name}","comments_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1527/comments","events_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1527/events","html_url":"https://github.com/chapmanb/bcbio-nextgen/issues/1527","id":172759447,"number":1527,"title":"illumina ftp not available on install","user":{"login":"mattdmem","id":16154750,"avatar_url":"https://avatars.githubusercontent.com/u/16154750?v=3","gravatar_id":"","url":"https://api.github.com/users/mattdmem","html_url":"https://github.com/mattdmem","followers_url":"https://api.github.com/users/mattdmem/followers","following_url":"https://api.github.com/users/mattdmem/following{/other_user}","gists_url":"https://api.github.com/users/mattdmem/gists{/gist_id}","starred_url":"https://api.github.com/users/mattdmem/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mattdmem/subscriptions","organizations_url":"https://api.github.com/users/mattdmem/orgs","repos_url":"https://api.github.com/users/mattdmem/repos","events_url":"https://api.github.com/users/mattdmem/events{/privacy}","received_events_url":"https://api.github.com/users/mattdmem/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":7,"created_at":"2016-08-23T17:31:36Z","updated_at":"2016-08-30T07:20:43Z","closed_at":null,"body":"-2016-08-23 18:30:29--  ftp://platgene_ro:*password*@ussd-ftp.illumina.com/2016-1.0/hg19/small_variants/NA12878/NA12878.vcf.gz\r\n  (try: 6) => ‘validation/platinum-genome-NA12878/truth_small_variants.vcf.gz’\r\nConnecting to ussd-ftp.illumina.com (ussd-ftp.illumina.com)|66.192.10.36|:21... connected.\r\nLogging in as platgene_ro ...\r\nError in server response, closing control connection.\r\nRetrying.\r\n"},"comment":{"url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/comments/243354439","html_url":"https://github.com/chapmanb/bcbio-nextgen/issues/1527#issuecomment-243354439","issue_url":"https://api.github.com/repos/chapmanb/bcbio-nextgen/issues/1527","id":243354439,"user":{"login":"mattdmem","id":16154750,"avatar_url":"https://avatars.githubusercontent.com/u/16154750?v=3","gravatar_id":"","url":"https://api.github.com/users/mattdmem","html_url":"https://github.com/mattdmem","followers_url":"https://api.github.com/users/mattdmem/followers","following_url":"https://api.github.com/users/mattdmem/following{/other_user}","gists_url":"https://api.github.com/users/mattdmem/gists{/gist_id}","starred_url":"https://api.github.com/users/mattdmem/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/mattdmem/subscriptions","organizations_url":"https://api.github.com/users/mattdmem/orgs","repos_url":"https://api.github.com/users/mattdmem/repos","events_url":"https://api.github.com/users/mattdmem/events{/privacy}","received_events_url":"https://api.github.com/users/mattdmem/received_events","type":"User","site_admin":false},"created_at":"2016-08-30T07:20:43Z","updated_at":"2016-08-30T07:20:43Z","body":"Thanks brad.  I get this:\r\nUpgrading bcbio\r\nData not installed, no genomes provided with `--genomes` flag\r\nUpgrade completed successfully.\r\n\r\nI'm going to keep on at our IT to see what they can do."}}
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