{"action":"created","issue":{"url":"https://api.github.com/repos/kundajelab/dragonn/issues/7","repository_url":"https://api.github.com/repos/kundajelab/dragonn","labels_url":"https://api.github.com/repos/kundajelab/dragonn/issues/7/labels{/name}","comments_url":"https://api.github.com/repos/kundajelab/dragonn/issues/7/comments","events_url":"https://api.github.com/repos/kundajelab/dragonn/issues/7/events","html_url":"https://github.com/kundajelab/dragonn/issues/7","id":170579838,"number":7,"title":"Missing Dependency for Example Script simple_motif_detection.py?","user":{"login":"rmovva","id":17256372,"avatar_url":"https://avatars.githubusercontent.com/u/17256372?v=3","gravatar_id":"","url":"https://api.github.com/users/rmovva","html_url":"https://github.com/rmovva","followers_url":"https://api.github.com/users/rmovva/followers","following_url":"https://api.github.com/users/rmovva/following{/other_user}","gists_url":"https://api.github.com/users/rmovva/gists{/gist_id}","starred_url":"https://api.github.com/users/rmovva/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/rmovva/subscriptions","organizations_url":"https://api.github.com/users/rmovva/orgs","repos_url":"https://api.github.com/users/rmovva/repos","events_url":"https://api.github.com/users/rmovva/events{/privacy}","received_events_url":"https://api.github.com/users/rmovva/received_events","type":"User","site_admin":false},"labels":[],"state":"open","locked":false,"assignee":null,"assignees":[],"milestone":null,"comments":9,"created_at":"2016-08-11T06:42:23Z","updated_at":"2016-09-02T21:27:26Z","closed_at":null,"body":"Hi,\r\n\r\n1. I think there is a discrepancy between this git repo and the zip/tar files available from http://kundajelab.github.io/. Most noticeably, the dragonn-0.1.0 zip file contains the example script run.py, which works fine for me, while the git repo contains the example script simple_motif_detection.py. Some other files also seem to be different.\r\n\r\n2. When I try to run \"python simple_motif_detection.py\", I get the following error message (running on OS X 10.11.6):\r\n```\r\nTraceback (most recent call last):\r\n  File \"simple_motif_detection.py\", line 5, in <module>\r\n    from dragonn.hyperparameter_search import RandomSearch\r\n  File \"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/dragonn/hyperparameter_search.py\", line 6, in <module>\r\n    from moe.easy_interface.experiment import Experiment\r\nImportError: No module named moe.easy_interface.experiment\r\n```\r\nIs this a missing dependency? I tried installing the relevant module from http://yelp.github.io/MOE/install.html, but the error persisted.\r\n\r\n3. I'm putting this under the same issue as I assume it may be a related error, but when I run \"dragonn train --pos-sequences examples/example_pos_sequences.fa --neg-sequences examples/example_neg_sequences.fa --prefix training_example\" as indicated under \"15 seconds to your first DragoNN model\", I'm receiving the following error message:\r\n```\r\nTraceback (most recent call last):\r\n  File \"/Library/Frameworks/Python.framework/Versions/2.7/bin/dragonn\", line 9, in <module>\r\n    load_entry_point('dragonn==0.1.0', 'console_scripts', 'dragonn')()\r\n  File \"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pkg_resources/__init__.py\", line 542, in load_entry_point\r\n    return get_distribution(dist).load_entry_point(group, name)\r\n  File \"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/pkg_resources/__init__.py\", line 2569, in load_entry_point\r\n    raise ImportError(\"Entry point %r not found\" % ((group, name),))\r\nImportError: Entry point ('console_scripts', 'dragonn') not found\r\n```\r\n\r\nDespite these issues, what I _have_ gotten to work so far has been pretty awesome! This truly is deep learning for dummies. Thanks!\r\n-Rajiv\r\n"},"comment":{"url":"https://api.github.com/repos/kundajelab/dragonn/issues/comments/244491495","html_url":"https://github.com/kundajelab/dragonn/issues/7#issuecomment-244491495","issue_url":"https://api.github.com/repos/kundajelab/dragonn/issues/7","id":244491495,"user":{"login":"jisraeli","id":5925689,"avatar_url":"https://avatars.githubusercontent.com/u/5925689?v=3","gravatar_id":"","url":"https://api.github.com/users/jisraeli","html_url":"https://github.com/jisraeli","followers_url":"https://api.github.com/users/jisraeli/followers","following_url":"https://api.github.com/users/jisraeli/following{/other_user}","gists_url":"https://api.github.com/users/jisraeli/gists{/gist_id}","starred_url":"https://api.github.com/users/jisraeli/starred{/owner}{/repo}","subscriptions_url":"https://api.github.com/users/jisraeli/subscriptions","organizations_url":"https://api.github.com/users/jisraeli/orgs","repos_url":"https://api.github.com/users/jisraeli/repos","events_url":"https://api.github.com/users/jisraeli/events{/privacy}","received_events_url":"https://api.github.com/users/jisraeli/received_events","type":"User","site_admin":false},"created_at":"2016-09-02T21:27:26Z","updated_at":"2016-09-02T21:27:26Z","body":"@ajohi: the dragonn-users group is public so you should be able to post and comment freely. I just checked with one of our lab members and he was able to make a [post](https://groups.google.com/forum/#!topic/dragonn-users/V3CPZ6rfM9Q)  without sending a request to join. I don't seem to have received requests to join the group this week. can you please try again? I'd be happy to answer your question re pos/neg fastas on there."}}
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